Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10254.t1.stop1 | Ggra10254.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 221968..221970 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10254.t1.start1 | Ggra10254.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 223924..223926 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10254.t1 ID=Ggra10254.t1|Name=Ggra10254.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp
MLSCNHIPTKLRAALDSRDQRRLKTAISQLPTSLPQVEDSLEIARCLEEV
RVAADVFIEACDFDTAFESAVRTRAALITAKILPWAVSVLKNFAFEERVV
GRVALTLEHLGGGMEPRGDIGAAGAVDQLGILWKSHPSCVAIVDALISLC
TGHIDNISRFMRRRGITTAITVLNSPDTARNSKLEERIMILVGLCAICTP
DNNREGTSLVPAILGALKRKQGRTQIELTRHTFIAIANMAECWTKEEAGY
DLGDVHGLVELVAETWISVPRSREMAFASSWALAALYRYNMDVLRHLKRR
SQDMIAVHNRWRSNIRTVEFLASLTEAVKPETKRTKTLREALRAKSRRSE
VVPDPESLESNTHKSESDAEDMCVSGDEGDLTDREKSPVSVGEASIENQT
IIVDYDSDDEQTRPFETVHEPKSKTSPNKTSPNAVHSTLKEIPIIILDSD
SDDQSAVPAEPKNPAKSKGQQKNITRTRRRKRSAILEDDITHTEKAEPEV
SVKSASTRNTITEADEDWRVTTNGIVPVHSSTRSGLPSSRVSTTAVESKQ
TMRLGAHLYLSSFQRLSASRYIDLNTWMRNTSPPCGLDSQVTSESGRLSA
NSWGS* back to topspliced messenger RNA >Ggra10254.t1 ID=Ggra10254.t1|Name=Ggra10254.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1818bp|location=Sequence derived from alignment at tig00000016_pilon:221968..223926- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCTCCTGCAACCATATTCCGACCAAGTTGCGCGCTGCTTTGGATTC
TCGTGATCAGAGACGTCTCAAAACCGCCATATCTCAACTGCCAACATCCC
TTCCACAAGTCGAGGACTCCCTTGAGATAGCAAGATGTCTCGAAGAAGTG
CGAGTGGCCGCAGACGTGTTCATTGAAGCTTGCGATTTCGATACCGCGTT
CGAGTCTGCTGTGAGAACCCGGGCCGCACTTATTACGGCGAAAATTCTGC
CTTGGGCTGTTTCTGTGTTGAAGAACTTTGCGTTCGAGGAGCGAGTGGTG
GGGCGCGTGGCCCTTACCCTTGAACACCTGGGTGGTGGCATGGAACCTAG
AGGCGATATAGGAGCTGCTGGAGCCGTCGACCAGCTTGGTATCTTGTGGA
AGAGTCACCCTTCCTGTGTGGCCATAGTGGACGCCCTTATCTCTCTCTGC
ACCGGCCATATTGACAACATATCTCGGTTCATGAGACGTCGTGGGATTAC
TACAGCTATCACGGTACTTAACAGTCCAGACACTGCGCGAAATTCAAAGC
TTGAGGAACGTATCATGATTCTTGTGGGTCTTTGCGCCATTTGTACCCCC
GACAACAACCGTGAAGGCACTTCACTTGTTCCTGCGATTTTGGGTGCCTT
GAAACGGAAACAAGGGCGCACGCAAATCGAATTGACAAGGCATACGTTCA
TTGCCATCGCCAACATGGCAGAATGCTGGACGAAGGAAGAGGCTGGCTAT
GACCTTGGTGATGTTCATGGGTTGGTGGAGCTCGTCGCGGAAACATGGAT
ATCTGTTCCGAGATCAAGGGAGATGGCATTTGCGTCCTCATGGGCCCTAG
CCGCGCTCTACCGATATAACATGGACGTCCTTCGCCATCTCAAACGGAGG
TCGCAAGATATGATAGCCGTACATAATAGATGGCGATCCAATATAAGGAC
TGTGGAATTCCTGGCGAGTCTTACAGAAGCGGTGAAGCCAGAGACAAAGA
GAACAAAAACCCTCCGTGAGGCCCTCCGAGCCAAGTCGAGGAGAAGCGAA
GTTGTTCCAGACCCAGAGTCTCTGGAGTCTAACACGCATAAATCAGAGAG
CGACGCAGAGGACATGTGTGTGTCAGGGGATGAAGGCGATCTCACAGATA
GGGAGAAGTCTCCTGTTTCCGTGGGCGAAGCATCGATCGAGAACCAAACC
ATCATTGTCGACTATGATTCGGATGATGAACAAACTCGTCCTTTTGAAAC
AGTGCACGAACCCAAGTCAAAGACAAGTCCCAATAAGACAAGTCCCAATG
CAGTGCACTCTACACTCAAGGAGATTCCGATAATAATCCTGGATTCCGAT
TCTGATGACCAAAGTGCCGTCCCAGCTGAACCCAAGAACCCCGCAAAATC
GAAAGGACAACAGAAGAACATCACAAGAACAAGGAGAAGGAAGCGTTCGG
CAATTCTTGAAGACGACATCACGCACACTGAGAAGGCCGAACCCGAAGTA
TCAGTCAAGTCCGCGTCGACAAGGAACACGATTACTGAGGCGGACGAAGA
TTGGAGGGTTACTACCAATGGTATCGTCCCAGTCCATAGTTCCACCAGGT
CAGGGTTGCCAAGTTCTAGAGTGTCGACGACGGCGGTAGAATCCAAGCAA
ACGATGCGTCTGGGCGCTCATCTATATTTATCTAGCTTCCAGCGACTTTC
GGCTTCACGGTACATAGACCTAAATACATGGATGAGGAATACTTCGCCCC
CTTGTGGACTAGACAGTCAAGTTACTTCTGAGAGTGGACGTCTATCGGCG
AACAGTTGGGGATCATAA back to topprotein sequence of Ggra10254.t1 >Ggra10254.t1 ID=Ggra10254.t1|Name=Ggra10254.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=606bp
MLSCNHIPTKLRAALDSRDQRRLKTAISQLPTSLPQVEDSLEIARCLEEV
RVAADVFIEACDFDTAFESAVRTRAALITAKILPWAVSVLKNFAFEERVV
GRVALTLEHLGGGMEPRGDIGAAGAVDQLGILWKSHPSCVAIVDALISLC
TGHIDNISRFMRRRGITTAITVLNSPDTARNSKLEERIMILVGLCAICTP
DNNREGTSLVPAILGALKRKQGRTQIELTRHTFIAIANMAECWTKEEAGY
DLGDVHGLVELVAETWISVPRSREMAFASSWALAALYRYNMDVLRHLKRR
SQDMIAVHNRWRSNIRTVEFLASLTEAVKPETKRTKTLREALRAKSRRSE
VVPDPESLESNTHKSESDAEDMCVSGDEGDLTDREKSPVSVGEASIENQT
IIVDYDSDDEQTRPFETVHEPKSKTSPNKTSPNAVHSTLKEIPIIILDSD
SDDQSAVPAEPKNPAKSKGQQKNITRTRRRKRSAILEDDITHTEKAEPEV
SVKSASTRNTITEADEDWRVTTNGIVPVHSSTRSGLPSSRVSTTAVESKQ
TMRLGAHLYLSSFQRLSASRYIDLNTWMRNTSPPCGLDSQVTSESGRLSA
NSWGS* back to topmRNA from alignment at tig00000016_pilon:221968..223926- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10254.t1 ID=Ggra10254.t1|Name=Ggra10254.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1959bp|location=Sequence derived from alignment at tig00000016_pilon:221968..223926- (Gracilaria gracilis GNS1m male)
ATGCTCTCCTGCAACCATATTCCGACCAAGTTGCGCGCTGCTTTGGATTC
TCGTGATCAGAGACGTCTCAAAACCGCCATATCTCAACTGCCAACATCCC
TTCCACAAGTCGAGGACTCCCTTGAGATAGCAAGATGTCTCGAAGAAGTG
CGAGTGGCCGCAGACGTGTTCATTGAAGCTTGCGATTTCGATACCGCGTT
CGAGTCTGCTGTGAGAACCCGGGCCGCACTTATTACGGCGAAAATTCTGC
CTTGGGCTGTTTCTGTGTTGAAGAACTTTGCGTTCGAGGAGCGAGTGGTG
GGGCGCGTGGCCCTTACCCTTGAACACCTGGGTGGTGGCATGGAACCTAG
AGGCGATATAGGAGCTGCTGGAGCCGTCGACCAGCTTGGTATCTTGTGGA
AGAGTCACCCTTCCTGTGTGGCCATAGTGGACGCCCTTATCTCTCTCTGC
ACCGGCCATATTGACAACATATCTCGGTTCATGAGACGTCGTGGGATTAC
TACAGCTATCACGGTACTTAACAGTCCAGACACTGCGCGAAATTCAAAGC
TTGAGGAACGTATCATGATTCTTGTGGGTCTTTGCGCCATTTGTACCCCC
GACAACAACCGTGAAGGCACTTCACTTGTTCCTGCGATTTTGGGTGCCTT
GAAACGGAAACAAGGGCGCACGCAAATCGAATTGACAAGGCATACGTTCA
TTGCCATCGCCAACATGGCAGAATGCTGGACGAAGGAAGAGGCTGGCTAT
GACCTTGGTGATGTTCATGGGTTGGTGGAGCTCGTCGCGGAAACATGGAT
ATCTGTTCCGAGATCAAGGGAGATGGCATTTGCGTCCTCATGGGCCCTAG
CCGCGCTCTACCGATATAACATGGACGTCCTTCGCCATCTCAAACGGAGG
TCGCAAGATATGATAGCCGTACATAATAGATGGCGATCCAATATAAGGAC
TGTGGAATTCCTGGCGAGTCTTACAGAAGCGGTGAAGCCAGAGACAAAGA
GAACAAAAACCCTCCGTGAGGCCCTCCGAGCCAAGTCGAGGAGAAGCGAA
GTTGTTCCAGACCCAGAGTCTCTGGAGTCTAACACGCATAAATCAGAGAG
CGACGCAGAGGACATGTGTGTGTCAGGGGATGAAGGCGATCTCACAGATA
GGGAGAAGTCTCCTGTTTCCGTGGGCGAAGCATCGATCGAGAACCAAACC
ATCATTGTCGACTATGATTCGGATGATGAACAAACTCGTCCTTTTGAAAC
AGTGCACGAACCCAAGTCAAAGACAAGTCCCAATAAGACAAGTCCCAATG
CAGTGCACTCTACACTCAAGGAGATTCCGATAATAATCCTGGATTCCGAT
TCTGATGACCAAAGTGCCGTCCCAGCTGAACCCAAGAACCCCGCAAAATC
GAAAGGACAACAGAAGAACATCACAAGAACAAGGAGAAGGAAGCGTTCGG
CAATTCTTGAAGACGACATCACGCACACTGAGGTATCTACCAAGAAGCCT
AGGGAAGAGATGCAGAATGAAAATCTGAATATGCGAAGATCAAAGAGACA
AAGAAGGCCGAACCCGAAGTATCAGTCAAGTCCGCGTCGACAAGGAACAC
GATTACTGAGGCGGACGAAGATTGGAGGGTTACTACCAATGGTATCGTCC
CAGTCCATAGTTCCACCAGGTCAGGGTTGCCAAGTTCTAGAGTGTCGACG
ACGGCGGTAGAATCCAAGGTACGATCCGTTCTTAGCTTCTCGCAAGCGCT
TGAGACATAACACTAAACCTTCACGCTTATCGCGACAGCAAACGATGCGT
CTGGGCGCTCATCTATATTTATCTAGCTTCCAGCGACTTTCGGCTTCACG
GTACATAGACCTAAATACATGGATGAGGAATACTTCGCCCCCTTGTGGAC
TAGACAGTCAAGTTACTTCTGAGAGTGGACGTCTATCGGCGAACAGTTGG
GGATCATAA back to topCoding sequence (CDS) from alignment at tig00000016_pilon:221968..223926- >Ggra10254.t1 ID=Ggra10254.t1|Name=Ggra10254.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1818bp|location=Sequence derived from alignment at tig00000016_pilon:221968..223926- (Gracilaria gracilis GNS1m male)
ATGCTCTCCTGCAACCATATTCCGACCAAGTTGCGCGCTGCTTTGGATTC
TCGTGATCAGAGACGTCTCAAAACCGCCATATCTCAACTGCCAACATCCC
TTCCACAAGTCGAGGACTCCCTTGAGATAGCAAGATGTCTCGAAGAAGTG
CGAGTGGCCGCAGACGTGTTCATTGAAGCTTGCGATTTCGATACCGCGTT
CGAGTCTGCTGTGAGAACCCGGGCCGCACTTATTACGGCGAAAATTCTGC
CTTGGGCTGTTTCTGTGTTGAAGAACTTTGCGTTCGAGGAGCGAGTGGTG
GGGCGCGTGGCCCTTACCCTTGAACACCTGGGTGGTGGCATGGAACCTAG
AGGCGATATAGGAGCTGCTGGAGCCGTCGACCAGCTTGGTATCTTGTGGA
AGAGTCACCCTTCCTGTGTGGCCATAGTGGACGCCCTTATCTCTCTCTGC
ACCGGCCATATTGACAACATATCTCGGTTCATGAGACGTCGTGGGATTAC
TACAGCTATCACGGTACTTAACAGTCCAGACACTGCGCGAAATTCAAAGC
TTGAGGAACGTATCATGATTCTTGTGGGTCTTTGCGCCATTTGTACCCCC
GACAACAACCGTGAAGGCACTTCACTTGTTCCTGCGATTTTGGGTGCCTT
GAAACGGAAACAAGGGCGCACGCAAATCGAATTGACAAGGCATACGTTCA
TTGCCATCGCCAACATGGCAGAATGCTGGACGAAGGAAGAGGCTGGCTAT
GACCTTGGTGATGTTCATGGGTTGGTGGAGCTCGTCGCGGAAACATGGAT
ATCTGTTCCGAGATCAAGGGAGATGGCATTTGCGTCCTCATGGGCCCTAG
CCGCGCTCTACCGATATAACATGGACGTCCTTCGCCATCTCAAACGGAGG
TCGCAAGATATGATAGCCGTACATAATAGATGGCGATCCAATATAAGGAC
TGTGGAATTCCTGGCGAGTCTTACAGAAGCGGTGAAGCCAGAGACAAAGA
GAACAAAAACCCTCCGTGAGGCCCTCCGAGCCAAGTCGAGGAGAAGCGAA
GTTGTTCCAGACCCAGAGTCTCTGGAGTCTAACACGCATAAATCAGAGAG
CGACGCAGAGGACATGTGTGTGTCAGGGGATGAAGGCGATCTCACAGATA
GGGAGAAGTCTCCTGTTTCCGTGGGCGAAGCATCGATCGAGAACCAAACC
ATCATTGTCGACTATGATTCGGATGATGAACAAACTCGTCCTTTTGAAAC
AGTGCACGAACCCAAGTCAAAGACAAGTCCCAATAAGACAAGTCCCAATG
CAGTGCACTCTACACTCAAGGAGATTCCGATAATAATCCTGGATTCCGAT
TCTGATGACCAAAGTGCCGTCCCAGCTGAACCCAAGAACCCCGCAAAATC
GAAAGGACAACAGAAGAACATCACAAGAACAAGGAGAAGGAAGCGTTCGG
CAATTCTTGAAGACGACATCACGCACACTGAGAAGGCCGAACCCGAAGTA
TCAGTCAAGTCCGCGTCGACAAGGAACACGATTACTGAGGCGGACGAAGA
TTGGAGGGTTACTACCAATGGTATCGTCCCAGTCCATAGTTCCACCAGGT
CAGGGTTGCCAAGTTCTAGAGTGTCGACGACGGCGGTAGAATCCAAGCAA
ACGATGCGTCTGGGCGCTCATCTATATTTATCTAGCTTCCAGCGACTTTC
GGCTTCACGGTACATAGACCTAAATACATGGATGAGGAATACTTCGCCCC
CTTGTGGACTAGACAGTCAAGTTACTTCTGAGAGTGGACGTCTATCGGCG
AACAGTTGGGGATCATAA back to top
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