Ggra9025.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A2V3INK9 (RNA polymerase II-associated protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK9_9FLOR) HSP 1 Score: 459 bits (1180), Expect = 1.920e-159 Identity = 238/349 (68.19%), Postives = 297/349 (85.10%), Query Frame = 0
Query: 1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRS--RNSAA-EAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVTTSLMRSLRGSYL 346
MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGN+AYR GRYH+AVQ YT AESINPMSPIPPANRAMVFLKLKD+ERAKAEA+IAHELH S+PEEDR+KRL AKILLRRATANKEL+L+ALAAEDYQAVL LEDNATAK EL +L++RYG+RPP+PR RS RNSA+ E +I++VSE+ +NG+ T + P ++ QD+T+++ +S +TMQ+L++KW T+EP NA +FERSWKSL+DDE+AQAKYLL+VVG QRIE+GLLGEILT QL++RV+ VLSTA+ + Y +S A IL+AF++VSRF M+LMFL+S+E+++IR LID++ KN V+ ++ +L YL
Sbjct: 1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNNAYREGRYHDAVQHYTAAESINPMSPIPPANRAMVFLKLKDFERAKAEASIAHELHISVPEEDRNKRLSAKILLRRATANKELMLYALAAEDYQAVLGLEDNATAKAELRVLQQRYGIRPPSPRLRSSLRNSASSEPRIEVVSETTARSNGMAVKTTQTSRPA-VSKDQDDTELVQISKSTMQDLLVKWGTTEPRNAVDFERSWKSLRDDEMAQAKYLLEVVGAQRIEQGLLGEILTAQLLERVILVLSTALMREPGYKSSIALILLAFTKVSRFSMVLMFLTSAEKRKIRILIDTLRKNNVSEEMIDNLGERYL 348
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A553PYD8 (RPAP3_C domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553PYD8_9TELE) HSP 1 Score: 86.7 bits (213), Expect = 5.380e-15 Identity = 87/336 (25.89%), Postives = 147/336 (43.75%), Query Frame = 0
Query: 29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRE---------------RYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQI---LHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVTTSLMRSLRGSY 345
+K+ GND ++ GR+ AV+ YT + M+ + PANRAM FLKL + A+ + +A L S K RRATA L A +D+ VL LE N A EL L E R +RP R++ A +++I G +P + + P + E + L + +N ++L + P ++ + E + ++ YL + Q ++ + L P+L+ +++ A A ++L SRV RFDM +MF+SS+E++ ++ L +E G+T S ++ L+ Y
Sbjct: 272 QKDNGNDHFKAGRFEAAVECYTKGMEADRMNALLPANRAMAFLKLHRFSEAEQDCCVALTLDPSY----------TKAFARRATARAALGNTEDARDDFMQVLKLEPGNKQALNELQKLSEEKQSNARLVPQEVAQRRTIRPIQKPEHLRSTKALRRMQIQE-----VTGASPQSTAQQMRSPEVKSSCENRSMFELRIPEN--RSLEEQDVPPPPSSSFQLEADLRKIRHHTQLTHTYLKSIPPDQYLQ--IFQTNLEPELMMQILQSFHHAQAPSSEELCILLEVLKNLSRVRRFDMAIMFMSSAEKKMVQDLFAQIEGAGLTDSSVQDLQKRY 588
BLAST of Ggra9025.t1 vs. uniprot
Match: RNA polymerase II-associated protein 3 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A575DC (RNA polymerase II-associated protein 3 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A575DC) HSP 1 Score: 85.1 bits (209), Expect = 1.040e-14 Identity = 81/337 (24.04%), Postives = 160/337 (47.48%), Query Frame = 0
Query: 29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLE-DNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQ-------------ILHLSDNTMQNLVLKWSTS--EPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVT----TSLMRSLRGSY 345
EKE GN+ +++ ++ EA+ Y+ + + +P + + AN+AM F+K++ +++A+ + E+L +DR K RRATA KEL A ED + L LE +N K + + ++ Y S + S+ + K+ + G P ++QD T+ + HL+ + ++ + + + P++A +FE SW+ D QA+ LL + PQ + + + + L+ + V S ++ + + S + L ++VSRFDM+++ L+S+++ ++R + + V N T ++ +LR Y
Sbjct: 82 EKELGNEYFKQKKFKEAIDCYSRSIAFSPTA-VAYANKAMAFIKIRRFQQAEDDCT------EALNLDDRY----IKAYSRRATARKELGKLKEAMEDAEFALRLEPENQEIKKQYADIKSLYENEILQKASGALGSSLQVTQKLGESATNTYRGTVHPVPNVAEKSGAADLQDHTKGHNRINKQEMKASVQHLASHVASRVMAEAAKNITPPNSAYQFEVSWRGFSGDPALQAR-LLKAISPQDLPKIFKNALSSALLMDIIKCVASFFTSEDTALAVSYIEHL---TKVSRFDMLIVCLTSTDKHDLRKIWEEVFCNEATPMEYAEILDNLRSKY 403
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A397UFE3 (RPAP3_C domain-containing protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UFE3_9GLOM) HSP 1 Score: 81.6 bits (200), Expect = 1.040e-13 Identity = 84/332 (25.30%), Postives = 146/332 (43.98%), Query Frame = 0
Query: 16 GRLPPSLQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYG-----VRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTE--VQDETQILHLS-DNTMQNL--------VLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKN 331
G+ L+K+ +EKE GN+ +++G Y +A++ Y A ++P + NRAM +LKLK + A+ + LH P+ K L RR A +EL A +D + L LE N TA ++ YG + +P S +V+ N + E L E ++ ++L +NT Q + V+K +T P N EFER W +D++ +++ + P LL + P + ++V ++ Y S + IL SRV RF+++LM L +++ + L+ ++ K+
Sbjct: 11 GKKTLRLEKAL-QEKETGNNFFKKGDYKKAIEHYGKAIELDPKEAVYVINRAMAYLKLKKWVEAENDCTNGLLLH---PDN-------TKALWRRGIARRELGKLQDAKKDLEDALQLEPNDTA------IKNEYGKVLDAIMASSPDRTSNEIPRSVDGSVVNNINRRRLSIE------EVDLDENERIIESAKKVLFTDKNNTSQQIANENGNIKVIKINT--PRNIHEFERDWNRYQDNDENLYQFIKAI--PPASYPTLLSDFFEPDYLSKIVFIMKKYFLLYDSVN-DIYNILYYLSRVGRFNLVLMLLEKDDKKVLEDLLSTLYKS 314
BLAST of Ggra9025.t1 vs. uniprot
Match: RNA polymerase II-associated protein 3 isoform X1 n=3 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D089218 (RNA polymerase II-associated protein 3 isoform X1 n=3 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D089218) HSP 1 Score: 79.0 bits (193), Expect = 1.120e-12 Identity = 80/316 (25.32%), Postives = 146/316 (46.20%), Query Frame = 0
Query: 29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDN---------------TMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSV 328
EK+ GN+ +++ ++ EA+ Y+ + +++P + + ANRAM ++K+K ++ A+ ++ E+L +DR K RRATA KEL + ED + L LE N K + + + Y R S K+ ++ NGH + P + T V+D T+ ++ S + N++ + + P A +FE SW+ L D QAK LL + P+ + + LT ++ ++ ++T + + S L ++V RFD ++MFLSS ++ ++ D V
Sbjct: 68 EKDLGNEYFKQKKFKEAIDCYSRSIALSPTA-VAFANRAMSYIKIKRFQEAE------NDCTEALNLDDRY----IKAYSRRATARKELGKLKASIEDAEFALRLEPHNQEIKKQYAEAKSLYEKRILQKISEQEKQNVG---KLDTKVNGH---IIQPVSSSTQRKQMTAVEDHTKKINKSGKQAWKVSVQELASRAASRANVLAAQNITRPTTAYQFEASWRGLSGDRALQAK-LLKAIYPRELPY-IFKNALTVHILVDIIKCVTTFFIDEMALTVS---FLENLTKVPRFDTLIMFLSSKDKDDLAKTWDEV 361
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A0V1KM50 (RPAP3_C domain-containing protein n=10 Tax=Trichinella TaxID=6333 RepID=A0A0V1KM50_9BILA) HSP 1 Score: 79.0 bits (193), Expect = 1.810e-12 Identity = 77/289 (26.64%), Postives = 126/289 (43.60%), Query Frame = 0
Query: 29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWS---TSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLS 314
EKE GN Y + Y +A+ Y+ + S +P P+ NRAM +LKLK+Y A A+ + A + K L RR A+K L F A ED+Q + ++ A+ + ++ Y V P + + K+ IV ++ K + + DE+ + S+ + + L S T P AE W S+K++ LA A Y+L++ P LLGE L + + ++ V S S + L + RFD++++FLS
Sbjct: 217 EKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTY----------VKALYRRGMASKGLNNFDDAVEDFQHISKVKP---AENDPLLV---YPVENPDEKEYQK----PLKVIIVRDA----------VKKSQFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNI--PCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLS 473
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A1U7VY71 (RNA polymerase II-associated protein 3 isoform X6 n=14 Tax=Nicotiana TaxID=4085 RepID=A0A1U7VY71_NICSY) HSP 1 Score: 77.0 bits (188), Expect = 6.420e-12 Identity = 87/332 (26.20%), Postives = 152/332 (45.78%), Query Frame = 0
Query: 27 DEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDN----------ATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFT----EVQDETQILHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSV-----EKNGVTTSLMR 339
+ EKE GN+ +++ ++ EA+ Y+ + +++P + + ANRAM +LKLK ++ A+ ++ E+L +DR K RR+TA KEL + ED + LE A E IL+ G + + ++N+ K V +S G + V K A P E+++ Q L ++ + + P++A +FE SW+ L D Q +LL V P + + + P L+ V V + ++ A + L ++V RFDMI+M LSS+++ E+ + D V E++ T +R
Sbjct: 128 NSEKELGNEFFKQKKFKEAIDCYSRSIALSPTA-VAYANRAMAYLKLKRFQEAE------NDCTEALNLDDRY----IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATGVSAQG-AQNTGKTNKTGPVIQSVGSSQKVAE-VRKIPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQT-HLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM----DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALR 441
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A8J1UAN7 (Ofus.G112090 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UAN7_OWEFU) HSP 1 Score: 77.0 bits (188), Expect = 1.060e-11 Identity = 81/345 (23.48%), Postives = 146/345 (42.32%), Query Frame = 0
Query: 22 LQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRERY---------------------------GVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVL-KWSTSEPHNAA-----EFERSWKSLKDD-ELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYS--TSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVE 329
+ FD K +GND ++ + A++ YT S+ P P+ NRA+ +L++ ++A+ + + L E ++ K L RRA A K L+ + + ED +L L+ N+ AK E ++++ Y G R ++ S + KI + T G+ P + + + Q+ S + L K + S PH ++ EF +W SLK E+A +L + P+ I + +L+ +L + +++ V Y IL S+V RFD+I MF+SS E+Q + ++ S++
Sbjct: 687 IDAKFDNLKAQGNDCVQKSNFSRAIECYTGCISLAPERPVSYTNRALCYLRINKPQQAEQDCKVV------LKYEPQN----IKALFRRAQARKMLMQYKESLEDLMTLLKLDPKNSAAKKEADVVKQYYKKQLTEMKSPGSSASLTRGKKITIEEVGSSSDDERKEAKKSPGKITQKITELKSTITKGIDGKRAGSPEKTPGKDKKQKEQVKKASTLVETSAGLPKAAPSTPHLSSKPTPYEFMTAWNSLKGSTEIAPYAKILSQLKPKNIPK-----VLSNKLDGGMFSIIVKCVEDYNKEGKVVETLDILKFLSKVQRFDVIAMFMSSQEKQVLTDILSSLK 1016
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A3M7KYY1 (RPAP3_C domain-containing protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KYY1_AUXPR) HSP 1 Score: 75.5 bits (184), Expect = 1.090e-11 Identity = 83/295 (28.14%), Postives = 133/295 (45.08%), Query Frame = 0
Query: 30 KEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWSTSEPHNA--AEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIR 322
+E+GN+ +R+GR +EA YTT+ + P +P ANRA V+LK ++++RA+A+ + EL K RRATA + L AA D++ V + ++T E SR+R ++ +S +P + P PL +V + + +L+L+ A EFER+W+ K D AQA LL + P R+ LL +L P+L+ V + +VA R + A +L A V RF M+ M L+ + +R
Sbjct: 47 REEGNEHFRKGRLNEAAASYTTSLKLKP-TPAAFANRAAVYLKRREWDRAEADCSACLELDAGF----------VKAYHRRATAREALGDMHGAAADFERVFCHDPSSTQAVE----------------SRARC------LRAFLDSQPSNGAPSPGSQGPSGPL---QVSVSLEACEPGPSPGVSLLLEQEAGGSAAALGVEFERAWRGSKRDPPAQAA-LLCAIPPARLPH-LLTHVLNPELLAEVAMRVLESVA--RRQPSLALDLLRALRCVPRFPMLAMGLAPRQCAALR 301
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A0P1AW29 (Uncharacterized conserved protein, contains LRR repeats n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW29_PLAHL) HSP 1 Score: 76.3 bits (186), Expect = 1.270e-11 Identity = 92/353 (26.06%), Postives = 160/353 (45.33%), Query Frame = 0
Query: 5 TEEQLLQLSLTGRLPPSL--QKSFDE-EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATA-KTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGH------TNGVTPPTNKP-----EAPLPFTEVQDETQILHLSDNTMQNLVL--KWSTSEPHNAAEFERSWKSL--KDDELAQAKYL------LDVVGPQRI----ERGLLGEILTP--QLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALID 326
T+ Q++ T + P SL K+ +E E+E GN Y++G + A++ YT NP + + +NRAM +LK ++Y A+ + +A E + K +RR TA L LA D+Q L+ + +T+L RE +R RS R E IK+V+E +G + V T K ++P P ++ SD+ ++L+ K+ P + EF R WK+L + DE + + L L ++ P + + G+ ++L ++ + + T A + A + ++V RF+MI+M LSS E+ +I +I+
Sbjct: 123 TQNLSCQVAATKKTPASLTASKTREELEREDGNLHYKQGDFVAAIKSYTRCLGYNPQNVVVLSNRAMAYLKNREYTNAEDDCTLALE----------TDLTHVKSYMRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQLQSTREL--IRMAIKRSPKRT---EFTIKVVNEKSGIEDKKDINSSVQERTEKSSLPSSQSPSPAISASSGSR----SDDADKHLIFFPKFPKKAPATSYEFARVWKTLALRGDEEQKCRLLHLRADYLRIIDPPALSAVFKSGMESDVLCEIFHTLRHAILIQITNEAVSKESVMFALALASELTKVPRFNMIIMLLSSREKVDILWVIN 456 The following BLAST results are available for this feature:
BLAST of Ggra9025.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9025.t1 ID=Ggra9025.t1|Name=Ggra9025.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bpback to top |