Ggra9025.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9025.t1
Unique NameGgra9025.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A2V3INK9 (RNA polymerase II-associated protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK9_9FLOR)

HSP 1 Score: 459 bits (1180), Expect = 1.920e-159
Identity = 238/349 (68.19%), Postives = 297/349 (85.10%), Query Frame = 0
Query:    1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRS--RNSAA-EAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVTTSLMRSLRGSYL 346
            MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGN+AYR GRYH+AVQ YT AESINPMSPIPPANRAMVFLKLKD+ERAKAEA+IAHELH S+PEEDR+KRL AKILLRRATANKEL+L+ALAAEDYQAVL LEDNATAK EL +L++RYG+RPP+PR RS  RNSA+ E +I++VSE+   +NG+   T +   P   ++ QD+T+++ +S +TMQ+L++KW T+EP NA +FERSWKSL+DDE+AQAKYLL+VVG QRIE+GLLGEILT QL++RV+ VLSTA+ +   Y +S A IL+AF++VSRF M+LMFL+S+E+++IR LID++ KN V+  ++ +L   YL
Sbjct:    1 MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNNAYREGRYHDAVQHYTAAESINPMSPIPPANRAMVFLKLKDFERAKAEASIAHELHISVPEEDRNKRLSAKILLRRATANKELMLYALAAEDYQAVLGLEDNATAKAELRVLQQRYGIRPPSPRLRSSLRNSASSEPRIEVVSETTARSNGMAVKTTQTSRPA-VSKDQDDTELVQISKSTMQDLLVKWGTTEPRNAVDFERSWKSLRDDEMAQAKYLLEVVGAQRIEQGLLGEILTAQLLERVILVLSTALMREPGYKSSIALILLAFTKVSRFSMVLMFLTSAEKRKIRILIDTLRKNNVSEEMIDNLGERYL 348          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A553PYD8 (RPAP3_C domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553PYD8_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 5.380e-15
Identity = 87/336 (25.89%), Postives = 147/336 (43.75%), Query Frame = 0
Query:   29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRE---------------RYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQI---LHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVTTSLMRSLRGSY 345
            +K+ GND ++ GR+  AV+ YT     + M+ + PANRAM FLKL  +  A+ +  +A  L  S            K   RRATA   L     A +D+  VL LE  N  A  EL  L E               R  +RP       R++ A  +++I         G +P +   +   P  +   E +    L + +N  ++L  +     P ++ + E   + ++        YL  +   Q ++  +    L P+L+ +++     A A          ++L   SRV RFDM +MF+SS+E++ ++ L   +E  G+T S ++ L+  Y
Sbjct:  272 QKDNGNDHFKAGRFEAAVECYTKGMEADRMNALLPANRAMAFLKLHRFSEAEQDCCVALTLDPSY----------TKAFARRATARAALGNTEDARDDFMQVLKLEPGNKQALNELQKLSEEKQSNARLVPQEVAQRRTIRPIQKPEHLRSTKALRRMQIQE-----VTGASPQSTAQQMRSPEVKSSCENRSMFELRIPEN--RSLEEQDVPPPPSSSFQLEADLRKIRHHTQLTHTYLKSIPPDQYLQ--IFQTNLEPELMMQILQSFHHAQAPSSEELCILLEVLKNLSRVRRFDMAIMFMSSAEKKMVQDLFAQIEGAGLTDSSVQDLQKRY 588          
BLAST of Ggra9025.t1 vs. uniprot
Match: RNA polymerase II-associated protein 3 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A575DC (RNA polymerase II-associated protein 3 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A575DC)

HSP 1 Score: 85.1 bits (209), Expect = 1.040e-14
Identity = 81/337 (24.04%), Postives = 160/337 (47.48%), Query Frame = 0
Query:   29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLE-DNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQ-------------ILHLSDNTMQNLVLKWSTS--EPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKNGVT----TSLMRSLRGSY 345
            EKE GN+ +++ ++ EA+  Y+ + + +P + +  AN+AM F+K++ +++A+ +        E+L  +DR      K   RRATA KEL     A ED +  L LE +N   K + + ++  Y        S +  S+ +   K+   +     G   P           ++QD T+             + HL+ +    ++ + + +   P++A +FE SW+    D   QA+ LL  + PQ + +     + +  L+  +  V S   ++  + + S  + L   ++VSRFDM+++ L+S+++ ++R + + V  N  T      ++ +LR  Y
Sbjct:   82 EKELGNEYFKQKKFKEAIDCYSRSIAFSPTA-VAYANKAMAFIKIRRFQQAEDDCT------EALNLDDRY----IKAYSRRATARKELGKLKEAMEDAEFALRLEPENQEIKKQYADIKSLYENEILQKASGALGSSLQVTQKLGESATNTYRGTVHPVPNVAEKSGAADLQDHTKGHNRINKQEMKASVQHLASHVASRVMAEAAKNITPPNSAYQFEVSWRGFSGDPALQAR-LLKAISPQDLPKIFKNALSSALLMDIIKCVASFFTSEDTALAVSYIEHL---TKVSRFDMLIVCLTSTDKHDLRKIWEEVFCNEATPMEYAEILDNLRSKY 403          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A397UFE3 (RPAP3_C domain-containing protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UFE3_9GLOM)

HSP 1 Score: 81.6 bits (200), Expect = 1.040e-13
Identity = 84/332 (25.30%), Postives = 146/332 (43.98%), Query Frame = 0
Query:   16 GRLPPSLQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYG-----VRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTE--VQDETQILHLS-DNTMQNL--------VLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVEKN 331
            G+    L+K+  +EKE GN+ +++G Y +A++ Y  A  ++P   +   NRAM +LKLK +  A+ +      LH   P+         K L RR  A +EL     A +D +  L LE N TA      ++  YG     +   +P   S          +V+  N     +       E  L   E  ++   ++L    +NT Q +        V+K +T  P N  EFER W   +D++    +++  +  P      LL +   P  + ++V ++      Y S +     IL   SRV RF+++LM L   +++ +  L+ ++ K+
Sbjct:   11 GKKTLRLEKAL-QEKETGNNFFKKGDYKKAIEHYGKAIELDPKEAVYVINRAMAYLKLKKWVEAENDCTNGLLLH---PDN-------TKALWRRGIARRELGKLQDAKKDLEDALQLEPNDTA------IKNEYGKVLDAIMASSPDRTSNEIPRSVDGSVVNNINRRRLSIE------EVDLDENERIIESAKKVLFTDKNNTSQQIANENGNIKVIKINT--PRNIHEFERDWNRYQDNDENLYQFIKAI--PPASYPTLLSDFFEPDYLSKIVFIMKKYFLLYDSVN-DIYNILYYLSRVGRFNLVLMLLEKDDKKVLEDLLSTLYKS 314          
BLAST of Ggra9025.t1 vs. uniprot
Match: RNA polymerase II-associated protein 3 isoform X1 n=3 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D089218 (RNA polymerase II-associated protein 3 isoform X1 n=3 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D089218)

HSP 1 Score: 79.0 bits (193), Expect = 1.120e-12
Identity = 80/316 (25.32%), Postives = 146/316 (46.20%), Query Frame = 0
Query:   29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDN---------------TMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSV 328
            EK+ GN+ +++ ++ EA+  Y+ + +++P + +  ANRAM ++K+K ++ A+      ++  E+L  +DR      K   RRATA KEL     + ED +  L LE  N   K + +  +  Y  R     S           K+ ++ NGH   +  P +        T V+D T+ ++ S                 +  N++   + + P  A +FE SW+ L  D   QAK LL  + P+ +   +    LT  ++  ++  ++T      + + S    L   ++V RFD ++MFLSS ++ ++    D V
Sbjct:   68 EKDLGNEYFKQKKFKEAIDCYSRSIALSPTA-VAFANRAMSYIKIKRFQEAE------NDCTEALNLDDRY----IKAYSRRATARKELGKLKASIEDAEFALRLEPHNQEIKKQYAEAKSLYEKRILQKISEQEKQNVG---KLDTKVNGH---IIQPVSSSTQRKQMTAVEDHTKKINKSGKQAWKVSVQELASRAASRANVLAAQNITRPTTAYQFEASWRGLSGDRALQAK-LLKAIYPRELPY-IFKNALTVHILVDIIKCVTTFFIDEMALTVS---FLENLTKVPRFDTLIMFLSSKDKDDLAKTWDEV 361          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A0V1KM50 (RPAP3_C domain-containing protein n=10 Tax=Trichinella TaxID=6333 RepID=A0A0V1KM50_9BILA)

HSP 1 Score: 79.0 bits (193), Expect = 1.810e-12
Identity = 77/289 (26.64%), Postives = 126/289 (43.60%), Query Frame = 0
Query:   29 EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWS---TSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLS 314
            EKE GN  Y +  Y +A+  Y+ + S +P  P+   NRAM +LKLK+Y  A A+ + A     +            K L RR  A+K L  F  A ED+Q +  ++    A+ +  ++   Y V  P  +   +      K+ IV ++            K +       + DE+ +   S+  + +  L  S   T  P   AE    W S+K++ LA A Y+L++  P      LLGE L  + +  ++      V      S S  + L    +  RFD++++FLS
Sbjct:  217 EKESGNSFYVKKDYEKAIMCYSRSISADPFRPVVYCNRAMAYLKLKNYAEAYADCSKALTFDSTY----------VKALYRRGMASKGLNNFDDAVEDFQHISKVKP---AENDPLLV---YPVENPDEKEYQK----PLKVIIVRDA----------VKKSQFNSQQPALSDESNVTKQSEQKISDYKLNASIKITRIPKCYAELRADWISIKEEPLALADYILNI--PCDCFSNLLGEFLDGEFVANLLKAFMIKVNSEPQCSISCMERLELIGKAKRFDIVVLFLS 473          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A1U7VY71 (RNA polymerase II-associated protein 3 isoform X6 n=14 Tax=Nicotiana TaxID=4085 RepID=A0A1U7VY71_NICSY)

HSP 1 Score: 77.0 bits (188), Expect = 6.420e-12
Identity = 87/332 (26.20%), Postives = 152/332 (45.78%), Query Frame = 0
Query:   27 DEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDN----------ATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFT----EVQDETQILHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSV-----EKNGVTTSLMR 339
            + EKE GN+ +++ ++ EA+  Y+ + +++P + +  ANRAM +LKLK ++ A+      ++  E+L  +DR      K   RR+TA KEL     + ED +    LE              A  E  IL+   G    + +  ++N+    K   V +S G +  V     K  A  P      E+++  Q L     ++       + + P++A +FE SW+ L  D   Q  +LL V  P  + +     +  P L+  V  V + ++         A + L   ++V RFDMI+M LSS+++ E+  + D V     E++  T   +R
Sbjct:  128 NSEKELGNEFFKQKKFKEAIDCYSRSIALSPTA-VAYANRAMAYLKLKRFQEAE------NDCTEALNLDDRY----IKAYSRRSTARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSGATGVSAQG-AQNTGKTNKTGPVIQSVGSSQKVAE-VRKIPAKRPHKNSKQELKESVQELAARAASLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRDLQT-HLLKVTSPSMLPQIFKNALSAPMLMDIVRCVATFSIEDM----DLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCKGAEEHSATLGALR 441          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A8J1UAN7 (Ofus.G112090 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UAN7_OWEFU)

HSP 1 Score: 77.0 bits (188), Expect = 1.060e-11
Identity = 81/345 (23.48%), Postives = 146/345 (42.32%), Query Frame = 0
Query:   22 LQKSFDEEKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLED-NATAKTELSILRERY---------------------------GVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVL-KWSTSEPHNAA-----EFERSWKSLKDD-ELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYS--TSAAKILVAFSRVSRFDMILMFLSSSERQEIRALIDSVE 329
            +   FD  K +GND  ++  +  A++ YT   S+ P  P+   NRA+ +L++   ++A+ +  +       L  E ++     K L RRA A K L+ +  + ED   +L L+  N+ AK E  ++++ Y                           G      R  ++ S  +   KI    +  T G+           P  + + + Q+   S     +  L K + S PH ++     EF  +W SLK   E+A    +L  + P+ I +     +L+ +L   + +++   V  Y           IL   S+V RFD+I MF+SS E+Q +  ++ S++
Sbjct:  687 IDAKFDNLKAQGNDCVQKSNFSRAIECYTGCISLAPERPVSYTNRALCYLRINKPQQAEQDCKVV------LKYEPQN----IKALFRRAQARKMLMQYKESLEDLMTLLKLDPKNSAAKKEADVVKQYYKKQLTEMKSPGSSASLTRGKKITIEEVGSSSDDERKEAKKSPGKITQKITELKSTITKGIDGKRAGSPEKTPGKDKKQKEQVKKASTLVETSAGLPKAAPSTPHLSSKPTPYEFMTAWNSLKGSTEIAPYAKILSQLKPKNIPK-----VLSNKLDGGMFSIIVKCVEDYNKEGKVVETLDILKFLSKVQRFDVIAMFMSSQEKQVLTDILSSLK 1016          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A3M7KYY1 (RPAP3_C domain-containing protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KYY1_AUXPR)

HSP 1 Score: 75.5 bits (184), Expect = 1.090e-11
Identity = 83/295 (28.14%), Postives = 133/295 (45.08%), Query Frame = 0
Query:   30 KEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQDETQILHLSDNTMQNLVLKWSTSEPHNA--AEFERSWKSLKDDELAQAKYLLDVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIR 322
            +E+GN+ +R+GR +EA   YTT+  + P +P   ANRA V+LK ++++RA+A+ +   EL               K   RRATA + L     AA D++ V   + ++T   E                SR+R       ++   +S       +P +  P  PL   +V    +      +   +L+L+        A   EFER+W+  K D  AQA  LL  + P R+   LL  +L P+L+  V   +  +VA  R   + A  +L A   V RF M+ M L+  +   +R
Sbjct:   47 REEGNEHFRKGRLNEAAASYTTSLKLKP-TPAAFANRAAVYLKRREWDRAEADCSACLELDAGF----------VKAYHRRATAREALGDMHGAAADFERVFCHDPSSTQAVE----------------SRARC------LRAFLDSQPSNGAPSPGSQGPSGPL---QVSVSLEACEPGPSPGVSLLLEQEAGGSAAALGVEFERAWRGSKRDPPAQAA-LLCAIPPARLPH-LLTHVLNPELLAEVAMRVLESVA--RRQPSLALDLLRALRCVPRFPMLAMGLAPRQCAALR 301          
BLAST of Ggra9025.t1 vs. uniprot
Match: A0A0P1AW29 (Uncharacterized conserved protein, contains LRR repeats n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW29_PLAHL)

HSP 1 Score: 76.3 bits (186), Expect = 1.270e-11
Identity = 92/353 (26.06%), Postives = 160/353 (45.33%), Query Frame = 0
Query:    5 TEEQLLQLSLTGRLPPSL--QKSFDE-EKEKGNDAYRRGRYHEAVQRYTTAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSKRLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATA-KTELSILRERYGVRPPTPRSRSRNSAAEAKIKIVSESNGH------TNGVTPPTNKP-----EAPLPFTEVQDETQILHLSDNTMQNLVL--KWSTSEPHNAAEFERSWKSL--KDDELAQAKYL------LDVVGPQRI----ERGLLGEILTP--QLIQRVVAVLSTAVAQYRSYSTSAAKILVAFSRVSRFDMILMFLSSSERQEIRALID 326
            T+    Q++ T + P SL   K+ +E E+E GN  Y++G +  A++ YT     NP + +  +NRAM +LK ++Y  A+ +  +A E          +     K  +RR TA   L    LA  D+Q    L+  +   +T+L   RE   +R    RS  R    E  IK+V+E +G        + V   T K      ++P P       ++    SD+  ++L+   K+    P  + EF R WK+L  + DE  + + L      L ++ P  +    + G+  ++L      ++  + +  T  A  +     A  +    ++V RF+MI+M LSS E+ +I  +I+
Sbjct:  123 TQNLSCQVAATKKTPASLTASKTREELEREDGNLHYKQGDFVAAIKSYTRCLGYNPQNVVVLSNRAMAYLKNREYTNAEDDCTLALE----------TDLTHVKSYMRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQLQSTREL--IRMAIKRSPKRT---EFTIKVVNEKSGIEDKKDINSSVQERTEKSSLPSSQSPSPAISASSGSR----SDDADKHLIFFPKFPKKAPATSYEFARVWKTLALRGDEEQKCRLLHLRADYLRIIDPPALSAVFKSGMESDVLCEIFHTLRHAILIQITNEAVSKESVMFALALASELTKVPRFNMIIMLLSSREKVDILWVIN 456          
The following BLAST results are available for this feature:
BLAST of Ggra9025.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INK91.920e-15968.19RNA polymerase II-associated protein 3 n=1 Tax=Gra... [more]
A0A553PYD85.380e-1525.89RPAP3_C domain-containing protein n=1 Tax=Danionel... [more]
RNA polymerase II-associated protein 3 isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A575DC1.040e-1424.04RNA polymerase II-associated protein 3 isoform X1 ... [more]
A0A397UFE31.040e-1325.30RPAP3_C domain-containing protein n=3 Tax=Gigaspor... [more]
RNA polymerase II-associated protein 3 isoform X1 n=3 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D0892181.120e-1225.32RNA polymerase II-associated protein 3 isoform X1 ... [more]
A0A0V1KM501.810e-1226.64RPAP3_C domain-containing protein n=10 Tax=Trichin... [more]
A0A1U7VY716.420e-1226.20RNA polymerase II-associated protein 3 isoform X6 ... [more]
A0A8J1UAN71.060e-1123.48Ofus.G112090 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A3M7KYY11.090e-1128.14RPAP3_C domain-containing protein (Fragment) n=2 T... [more]
A0A0P1AW291.270e-1126.06Uncharacterized conserved protein, contains LRR re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 20..134
e-value: 2.6E-20
score: 74.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 27..149
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 225..318
e-value: 1.4E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3coord: 26..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1281275..1282315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9025.t1Ggra9025.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1281275..1282315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9025.t1 ID=Ggra9025.t1|Name=Ggra9025.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MESGTEEQLLQLSLTGRLPPSLQKSFDEEKEKGNDAYRRGRYHEAVQRYT
TAESINPMSPIPPANRAMVFLKLKDYERAKAEAAIAHELHESLPEEDRSK
RLCAKILLRRATANKELLLFALAAEDYQAVLDLEDNATAKTELSILRERY
GVRPPTPRSRSRNSAAEAKIKIVSESNGHTNGVTPPTNKPEAPLPFTEVQ
DETQILHLSDNTMQNLVLKWSTSEPHNAAEFERSWKSLKDDELAQAKYLL
DVVGPQRIERGLLGEILTPQLIQRVVAVLSTAVAQYRSYSTSAAKILVAF
SRVSRFDMILMFLSSSERQEIRALIDSVEKNGVTTSLMRSLRGSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR025986RPAP3-like_C