Gchil834.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil834.t1
Unique NameGchil834.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length498
Homology
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2V3IIS9_9FLOR (tRNA pseudouridine(55) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS9_9FLOR)

HSP 1 Score: 324 bits (830), Expect = 2.890e-102
Identity = 227/472 (48.09%), Postives = 274/472 (58.05%), Query Frame = 0
Query:   20 LCPCCALRARNVREPARYAAAATTDXXXXXXXXXXGSSGGACGACLGVLQRGALHAAAQAAHKQLRGVRHAGTYRVAAALPLSAALLRERALCLRRAAA----RPTSLRDALLCALRPLLAPL-RYDAAAELELALTYEHAACARDARFL------RLDAASRAXXXXXXXXXXXXXXXDEVLTPSSPPLSVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHV----ASPRATESVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHSV-RLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRMRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHISH 475
            LC  C LRA   R    Y   A  +XXXXXX         AC  CLGVLQ  AL AAA    +    VRH G Y++A  LPLS ALLR+R      AAA     P S+RDAL  ++ PLL  L R+   A L + L Y+   CA DA FL       L AA R                     P +P  S+ AA + L  LSD +FA AA   +  L R    V+++  V + P+LLAARY KLSR LSQTPW+V     + R   SVQA VERA+R  L +Q ATFTAGGREDVDVRML  GRPF++QL  + VVP L++   L  V   L+H V RL  LRV    Y  +MR +E  K+KHYRCVVY    LD  A   L++R + L+Q+TPLRVLHRR+   R + +    V R++N HFVVLDVV QAGTY+KEFVHGD+GRT PS+A  L CF DIVQLDVT ISH
Sbjct:   40 LCARCELRAGGERAARAYETTARDEXXXXXXALA------ACRVCLGVLQPRALRAAAAEVLRLAAAVRHDGRYKLAVHLPLSVALLRDRVFRQTAAAAAATVNPLSVRDALRLSIAPLLRALGRFCPDAPLLVTLKYDARCCASDAAFLPHLERAALPAAKR---------------------PRTPVPSITAAQKLLLELSDHEFAVAAQ-HLFPLPRVEHPVSIAASVASVPVLLAARYTKLSRVLSQTPWNVLRAAGNARVATSVQAAVERALRKHLLYQKATFTAGGREDVDVRMLGGGRPFIVQLHQSAVVPCLISQRLLDHVAAELQHHVVRLHHLRVVDASYVHKMREYEADKQKHYRCVVYTTGILDQQALRKLQLRDLQLMQKTPLRVLHRRTQMTRPKRIARVDVVRLINPHFVVLDVVAQAGTYIKEFVHGDNGRTTPSIASLLHCFVDIVQLDVTDISH 483          
BLAST of Gchil834.t1 vs. uniprot
Match: R7QGX4_CHOCR (tRNA pseudouridine(55) synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX4_CHOCR)

HSP 1 Score: 242 bits (617), Expect = 1.200e-70
Identity = 183/496 (36.90%), Postives = 253/496 (51.01%), Query Frame = 0
Query:   21 CPCCALRARNVREPARYAAAATTDXXXXXXXXXXGSSGGACGACLGVLQRGALHAAAQAAHKQLRGVRHAGTYRVAAALPLSAALLRERAL--CLRRAAARPTS--------LRDAL---LCALRPLLAPLRYDAAAELELALTYEHAACARDARFLRLDAASRAXXXXXXXXXXXXXXXDEVLTPSSPPLSVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATESVQAVVE-----------RAVRAELPFQSA--------------TFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQH---ALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAF-NALRMRHVSLL-QRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            CP C LR +N+R P  Y                       C  CLG+LQ  AL A   A    L  +RH   +++ A+LP+SA+LLR+RA    L  A   P S        LR+A+   +CA       +RY   A+L + L++ H     DA F+  D A+                           +S  A  RA  A++D+QF     PR        +   V+V V   P+L A RY KLSR +SQTPW V +P A   + A+             R  R EL  + A              TFTAGGREDVDVRML  GRPFV+++    +VP+L+  + + R++    ++  SV + + R+  +EY A+MR+FE  K+K YRCVV+  R +      + L ++   +L Q+TPLRVLHRR+ AVR R ++   + RV++ +F V+DVV  AGTY+KEFVHGDHGRT P+VA+ L C ADIVQLDVT I
Sbjct:   11 CPRCILRLQNIRTPPSYTRPIRPTPP--------------CSLCLGILQDPALTALITALRPHLSALRHDRRFKINASLPISASLLRDRAARHVLHHANLHPASPTDPHNVSLREAVKWAVCARVHDAFGMRYHPDAQLFVDLSFSHTPSNSDAAFVHTDPANPHKRRRLQND-----------------VSATAVVRAAAAMTDQQFVETMGPRFFPPPPIEQPAEVAVSVYVAPVLFAGRYNKLSRVVSQTPWFVDAPPAASGLAAIARANEGKVTDQYGRRKRTELSVEDAATAGIREVLNPDKATFTAGGREDVDVRMLGKGRPFVVEVINPKIVPALIEEEMVERMRALAASVSSSVVIRDFRMVSKEYFAQMRSFEMEKKKCYRCVVWTRREVGSEELKDKLEVQGGFMLRQKTPLRVLHRRTQAVRERCIFEARLTRVVSPNFFVMDVVAAAGTYIKEFVHGDHGRTLPNVAQLLDCDADIVQLDVTDI 475          
BLAST of Gchil834.t1 vs. uniprot
Match: M2VXC0_GALSU (tRNA pseudouridine(55) synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXC0_GALSU)

HSP 1 Score: 173 bits (439), Expect = 2.890e-45
Identity = 107/240 (44.58%), Postives = 148/240 (61.67%), Query Frame = 0
Query:  243 PILLAARYVKLSRALSQTPWHVASPR-ATESVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADAL-----RRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRMRHV---SLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            PI L  RY+KLSR LSQ+PW V + R A +S++  V   +  +L  +   FTAGGREDVDVRML  GRPF+++L  A    S V+ +       R+V       V+L E +V+     A ++  E +KRK YRC+VY+++++      A  +  +   ++ Q TPLRVLHRRS A R RV++   + ++LN HF +LD+VT AGTYVKEFVHGD GRT P +   L C  DI+QLDV H+
Sbjct:  188 PIYLQGRYIKLSRRLSQSPWIVDNIRLAPDSIEECVYEYLLHQLGARECRFTAGGREDVDVRMLGSGRPFIIELLEAKCTRSYVSNETFLRDWERQVFLRSNGQVQLQETKVSDAFGYASLKESEMTKRKTYRCIVYISKSVKDETGVAEYLGSLIPLTIEQYTPLRVLHRRSLAKRKRVIHEIRL-KLLNSHFAILDLVTDAGTYVKEFVHGDLGRTTPYLGSLLGCETDILQLDVLHV 426          
BLAST of Gchil834.t1 vs. uniprot
Match: A0A3P3YJ11_PLABS (tRNA pseudouridine(55) synthase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJ11_PLABS)

HSP 1 Score: 174 bits (441), Expect = 4.490e-45
Identity = 106/241 (43.98%), Postives = 143/241 (59.34%), Query Frame = 0
Query:  235 VSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHSVRLCELRVAPREYAAEMRAFET---SKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDV 470
            +++ V   P+L+  +Y K  R LSQ+PW + + R TES VQ ++   V A +      F + GREDVDVRML  GR FVL++     VPSL   + L    +     + +  L VAP +YA E +  +    SKRK YR +++ + AL   A   L+    + + Q+TP+RVLHRRS   R R +Y   + R+ N HF VLD+V QAGTY+KEFVHGD GRT PSV + L C ADIVQLDV
Sbjct:  242 IAITVSRQPVLITGKYRKFCRLLSQSPWVIDNKRKTESSVQELIADQVTAFIKCSDIKFHSAGREDVDVRMLGDGRHFVLEMIDPRRVPSLKELEELCLRINNSTDRIEVHSLSVAP-DYAKEFKTLQAGADSKRKSYRAIMWTSAALTDEAVRTLQGSAPIEIQQKTPIRVLHRRSLLSRPRTIYELSITRI-NKHFAVLDLVAQAGTYIKEFVHGDRGRTTPSVGDILTCQADIVQLDV 480          
BLAST of Gchil834.t1 vs. uniprot
Match: A0A067D9A4_SAPPC (tRNA pseudouridine(55) synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9A4_SAPPC)

HSP 1 Score: 166 bits (419), Expect = 6.590e-42
Identity = 114/277 (41.16%), Postives = 159/277 (57.40%), Query Frame = 0
Query:  201 GAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHV--VPSLVNADALRRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            GA SRAL  L        +PP      R + A ++SV V   P+ +A RY+K  R LSQTPW +   R  +S V+  +   +      +S  F   GREDVDVRML +GRPF+L+L  A V  +P+ + A    +V  A    V + EL  A +E  A +++   SKRK Y CVV+ +  L       L  +  + + Q+TP+RVLHRR+   R +V++   V  +LNDH+++L + T AGTYVKEFVHGD GRT P+VA  L C ADI+QLDV ++
Sbjct:  208 GAVSRALHNLHVLPAGVPSPPT-----RAQSAASISVSVERAPVYVAGRYLKFMRGLSQTPWVLDGERMGDSSVEEAIGDIISPVFGAKSYKFHTAGREDVDVRMLGNGRPFILELLDAKVATLPADMYATVQAQVNAANTDIVEIRELSSATKEGFAALQSGADSKRKTYCCVVWTSGVLTPERVAILNGICDLRVGQKTPVRVLHRRTLLTRPKVIHDASV-ELLNDHYMLLRLTTSAGTYVKEFVHGDLGRTYPNVASLLGCDADILQLDVENL 478          
BLAST of Gchil834.t1 vs. uniprot
Match: A0A1V9Z0V9_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0V9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.140e-41
Identity = 115/277 (41.52%), Postives = 155/277 (55.96%), Query Frame = 0
Query:  201 GAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADAL--RRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            GA SRAL  L     A  +PP  +     +    + V V   P+ +A RY+K  R LSQTPW +   R  +S V+  +   +  E   +S  F   GREDVDVRML +GRPF+L+L  A V      A A    RV  A    V + EL  A +E  A +++   SKRK Y CVV+ +  L       L  +  + + Q+TP+RVLHRR+   R +V++   V  VLNDH+++L + T AGTYVKEFVHGD GRT P+VA  L C ADI+QLDV ++
Sbjct:  203 GAVSRALSGLRSLPAAIPSPPTAV-----QSPATLVVTVERSPVYVAGRYLKYQRGLSQTPWVLDGERMGDSSVEEAIGDVIAPEFRAKSYKFHTAGREDVDVRMLGNGRPFILELLDAKVATLSPEAFATVQNRVNAANLDVVEVRELTGATKEGFAALQSGADSKRKTYCCVVWTSGVLTPARVATLNGIVDLKVAQKTPVRVLHRRTLLTRPKVIHDARV-EVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTFPNVASLLGCDADILQLDVENL 473          
BLAST of Gchil834.t1 vs. uniprot
Match: D0NE04_PHYIT (tRNA pseudouridine(55) synthase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NE04_PHYIT)

HSP 1 Score: 164 bits (415), Expect = 1.920e-41
Identity = 112/285 (39.30%), Postives = 162/285 (56.84%), Query Frame = 0
Query:  196 PPL--SVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATESVQAVVERAVRAELPF---QSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHS----VRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNAL-RMRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDV 470
            PP+    GA SRAL AL+    +  +PP  L+ A E  A         D + +  RY+K  R LSQTPW +   R  ES  +V E      LPF    S  F   GREDVDVRML +GRPF+L++ GA++     + D   ++Q A   +    V + +++ + ++Y A ++A   SK+K Y CVV+    L   A   +  ++ +++ Q+TP+RVLHRR+   R +++ H     VLN H+++L + T AGTYVKEFVH D GRT P++A  L C ADI+QLDV
Sbjct:  203 PPVFDGFGAVSRALAALTSMPESIKSPPSRLTTAPEAAA-----SFERDSVYMQGRYLKFQRGLSQTPWVLDGVRMGES--SVEECIGDVALPFFRGSSYKFHTAGREDVDVRMLGNGRPFILEILGAYL-----SEDEYDQIQKAANDANNGAVEIVQVKSSTKDYFAALQAGADSKKKTYCCVVWSEGELTPEAIAKIDSIQDLTIQQQTPVRVLHRRTLMTRPKII-HAAKCEVLNKHYMLLRLTTSAGTYVKEFVHSDRGRTNPNIASILGCDADIIQLDV 474          
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2T7CYW3_9POAL (tRNA pseudouridine(55) synthase n=5 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7CYW3_9POAL)

HSP 1 Score: 164 bits (415), Expect = 2.850e-41
Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 0
Query:  240 LTDPILLAARYVKLSRALSQTPWHVASPRATE-SVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALR-RVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRM-RHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLN-DHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            L  PI +  RY+KLSR +SQ+ W +   R  E SV+ ++   VRA     S  F A GRED+DVRML  GRPF+++L     +PS +    +  R+ ++ K  VR+  L++   E    MR  E  K+K Y  +++ +R L  N  + + + + + ++Q+TP+RVLHRRS   R R+++   + +V N  ++ +L + TQAGTY+KEFVHGD GRT PS+   L C A+I+QLDVT +
Sbjct:  261 LRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 498          
BLAST of Gchil834.t1 vs. uniprot
Match: R7U444_CAPTE (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U444_CAPTE)

HSP 1 Score: 158 bits (399), Expect = 4.090e-41
Identity = 96/245 (39.18%), Postives = 146/245 (59.59%), Query Frame = 0
Query:  232 AVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHS---VRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVT 471
            AV   ++ L +    A RY K SR LSQTPW +   R +ES ++  +   ++  +      F++ GREDVDV+ML  G PF++++   H V  + N + +R +Q  +  S   + + +L+   RE  A ++  ET K KHY  + +    ++  +F A+  M+ + L Q+TP+RVLHRR +A R R+V H   A V++DHF +L +VTQAGTY+KEFVHGD GRT PS+   L    DI++L+VT
Sbjct:   34 AVCEPIKCLHESTFFAGRYNKYSRVLSQTPWFIEGVRKSESSIEEYISIPLKEIVKSTETRFSSSGREDVDVKMLGRGLPFIIEVINPHRV--IFNKEHMRILQQKINSSTDEISVRDLQEITREDTALLKEGETEKVKHYSALCWCKDKINAESFTAINAMKDIVLKQKTPIRVLHRRPYACRERMV-HSIAAEVIDDHFCLLKLVTQAGTYIKEFVHGDLGRTVPSMCSLLGTQCDILELNVT 275          
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2T7CYL8_9POAL (tRNA pseudouridine(55) synthase n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7CYL8_9POAL)

HSP 1 Score: 164 bits (415), Expect = 4.870e-41
Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 0
Query:  240 LTDPILLAARYVKLSRALSQTPWHVASPRATE-SVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALR-RVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRM-RHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLN-DHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
            L  PI +  RY+KLSR +SQ+ W +   R  E SV+ ++   VRA     S  F A GRED+DVRML  GRPF+++L     +PS +    +  R+ ++ K  VR+  L++   E    MR  E  K+K Y  +++ +R L  N  + + + + + ++Q+TP+RVLHRRS   R R+++   + +V N  ++ +L + TQAGTY+KEFVHGD GRT PS+   L C A+I+QLDVT +
Sbjct:  295 LRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 532          
The following BLAST results are available for this feature:
BLAST of Gchil834.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS9_9FLOR2.890e-10248.09tRNA pseudouridine(55) synthase n=1 Tax=Gracilario... [more]
R7QGX4_CHOCR1.200e-7036.90tRNA pseudouridine(55) synthase n=1 Tax=Chondrus c... [more]
M2VXC0_GALSU2.890e-4544.58tRNA pseudouridine(55) synthase n=1 Tax=Galdieria ... [more]
A0A3P3YJ11_PLABS4.490e-4543.98tRNA pseudouridine(55) synthase n=2 Tax=Plasmodiop... [more]
A0A067D9A4_SAPPC6.590e-4241.16tRNA pseudouridine(55) synthase n=2 Tax=Saprolegni... [more]
A0A1V9Z0V9_9STRA1.140e-4141.52tRNA pseudouridine(55) synthase n=1 Tax=Achlya hyp... [more]
D0NE04_PHYIT1.920e-4139.30tRNA pseudouridine(55) synthase n=2 Tax=Phytophtho... [more]
A0A2T7CYW3_9POAL2.850e-4139.92tRNA pseudouridine(55) synthase n=5 Tax=Panicum ha... [more]
R7U444_CAPTE4.090e-4139.18tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A2T7CYL8_9POAL4.870e-4139.92tRNA pseudouridine(55) synthase n=7 Tax=Panicum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.3190coord: 366..474
e-value: 3.1E-33
score: 115.6
NoneNo IPR availableGENE3D3.30.70.2510coord: 243..365
e-value: 2.1E-25
score: 91.2
NoneNo IPR availablePANTHERPTHR21568:SF0TRNA PSEUDOURIDINE SYNTHASE PUS10-RELATEDcoord: 38..473
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 38..473
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 354..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:262211..263704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil834.t1Gchil834.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 262211..263704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil834.t1 ID=Gchil834.t1|Name=Gchil834.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=498bp
MGGGGDGDGDGDVDGDGDSLCPCCALRARNVREPARYAAAATTDADADAD
ADAEGSSGGACGACLGVLQRGALHAAAQAAHKQLRGVRHAGTYRVAAALP
LSAALLRERALCLRRAAARPTSLRDALLCALRPLLAPLRYDAAAELELAL
TYEHAACARDARFLRLDAASRAAAAAAAAYKRPRRRRDEVLTPSSPPLSV
GAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARY
VKLSRALSQTPWHVASPRATESVQAVVERAVRAELPFQSATFTAGGREDV
DVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHSVRLCELRVAP
REYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRMRHVSLLQRTPLR
VLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGR
TRPSVAERLRCFADIVQLDVTHISHAGADAHDHAVGQHAAHVNSNSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039894Pus10-like
IPR020103PsdUridine_synth_cat_dom_sf