Gchil834.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2V3IIS9_9FLOR (tRNA pseudouridine(55) synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS9_9FLOR) HSP 1 Score: 324 bits (830), Expect = 2.890e-102 Identity = 227/472 (48.09%), Postives = 274/472 (58.05%), Query Frame = 0
Query: 20 LCPCCALRARNVREPARYAAAATTDXXXXXXXXXXGSSGGACGACLGVLQRGALHAAAQAAHKQLRGVRHAGTYRVAAALPLSAALLRERALCLRRAAA----RPTSLRDALLCALRPLLAPL-RYDAAAELELALTYEHAACARDARFL------RLDAASRAXXXXXXXXXXXXXXXDEVLTPSSPPLSVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHV----ASPRATESVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHSV-RLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRMRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHISH 475
LC C LRA R Y A +XXXXXX AC CLGVLQ AL AAA + VRH G Y++A LPLS ALLR+R AAA P S+RDAL ++ PLL L R+ A L + L Y+ CA DA FL L AA R P +P S+ AA + L LSD +FA AA + L R V+++ V + P+LLAARY KLSR LSQTPW+V + R SVQA VERA+R L +Q ATFTAGGREDVDVRML GRPF++QL + VVP L++ L V L+H V RL LRV Y +MR +E K+KHYRCVVY LD A L++R + L+Q+TPLRVLHRR+ R + + V R++N HFVVLDVV QAGTY+KEFVHGD+GRT PS+A L CF DIVQLDVT ISH
Sbjct: 40 LCARCELRAGGERAARAYETTARDEXXXXXXALA------ACRVCLGVLQPRALRAAAAEVLRLAAAVRHDGRYKLAVHLPLSVALLRDRVFRQTAAAAAATVNPLSVRDALRLSIAPLLRALGRFCPDAPLLVTLKYDARCCASDAAFLPHLERAALPAAKR---------------------PRTPVPSITAAQKLLLELSDHEFAVAAQ-HLFPLPRVEHPVSIAASVASVPVLLAARYTKLSRVLSQTPWNVLRAAGNARVATSVQAAVERALRKHLLYQKATFTAGGREDVDVRMLGGGRPFIVQLHQSAVVPCLISQRLLDHVAAELQHHVVRLHHLRVVDASYVHKMREYEADKQKHYRCVVYTTGILDQQALRKLQLRDLQLMQKTPLRVLHRRTQMTRPKRIARVDVVRLINPHFVVLDVVAQAGTYIKEFVHGDNGRTTPSIASLLHCFVDIVQLDVTDISH 483
BLAST of Gchil834.t1 vs. uniprot
Match: R7QGX4_CHOCR (tRNA pseudouridine(55) synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX4_CHOCR) HSP 1 Score: 242 bits (617), Expect = 1.200e-70 Identity = 183/496 (36.90%), Postives = 253/496 (51.01%), Query Frame = 0
Query: 21 CPCCALRARNVREPARYAAAATTDXXXXXXXXXXGSSGGACGACLGVLQRGALHAAAQAAHKQLRGVRHAGTYRVAAALPLSAALLRERAL--CLRRAAARPTS--------LRDAL---LCALRPLLAPLRYDAAAELELALTYEHAACARDARFLRLDAASRAXXXXXXXXXXXXXXXDEVLTPSSPPLSVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATESVQAVVE-----------RAVRAELPFQSA--------------TFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQH---ALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAF-NALRMRHVSLL-QRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
CP C LR +N+R P Y C CLG+LQ AL A A L +RH +++ A+LP+SA+LLR+RA L A P S LR+A+ +CA +RY A+L + L++ H DA F+ D A+ +S A RA A++D+QF PR + V+V V P+L A RY KLSR +SQTPW V +P A + A+ R R EL + A TFTAGGREDVDVRML GRPFV+++ +VP+L+ + + R++ ++ SV + + R+ +EY A+MR+FE K+K YRCVV+ R + + L ++ +L Q+TPLRVLHRR+ AVR R ++ + RV++ +F V+DVV AGTY+KEFVHGDHGRT P+VA+ L C ADIVQLDVT I
Sbjct: 11 CPRCILRLQNIRTPPSYTRPIRPTPP--------------CSLCLGILQDPALTALITALRPHLSALRHDRRFKINASLPISASLLRDRAARHVLHHANLHPASPTDPHNVSLREAVKWAVCARVHDAFGMRYHPDAQLFVDLSFSHTPSNSDAAFVHTDPANPHKRRRLQND-----------------VSATAVVRAAAAMTDQQFVETMGPRFFPPPPIEQPAEVAVSVYVAPVLFAGRYNKLSRVVSQTPWFVDAPPAASGLAAIARANEGKVTDQYGRRKRTELSVEDAATAGIREVLNPDKATFTAGGREDVDVRMLGKGRPFVVEVINPKIVPALIEEEMVERMRALAASVSSSVVIRDFRMVSKEYFAQMRSFEMEKKKCYRCVVWTRREVGSEELKDKLEVQGGFMLRQKTPLRVLHRRTQAVRERCIFEARLTRVVSPNFFVMDVVAAAGTYIKEFVHGDHGRTLPNVAQLLDCDADIVQLDVTDI 475
BLAST of Gchil834.t1 vs. uniprot
Match: M2VXC0_GALSU (tRNA pseudouridine(55) synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXC0_GALSU) HSP 1 Score: 173 bits (439), Expect = 2.890e-45 Identity = 107/240 (44.58%), Postives = 148/240 (61.67%), Query Frame = 0
Query: 243 PILLAARYVKLSRALSQTPWHVASPR-ATESVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADAL-----RRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRMRHV---SLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
PI L RY+KLSR LSQ+PW V + R A +S++ V + +L + FTAGGREDVDVRML GRPF+++L A S V+ + R+V V+L E +V+ A ++ E +KRK YRC+VY+++++ A + + ++ Q TPLRVLHRRS A R RV++ + ++LN HF +LD+VT AGTYVKEFVHGD GRT P + L C DI+QLDV H+
Sbjct: 188 PIYLQGRYIKLSRRLSQSPWIVDNIRLAPDSIEECVYEYLLHQLGARECRFTAGGREDVDVRMLGSGRPFIIELLEAKCTRSYVSNETFLRDWERQVFLRSNGQVQLQETKVSDAFGYASLKESEMTKRKTYRCIVYISKSVKDETGVAEYLGSLIPLTIEQYTPLRVLHRRSLAKRKRVIHEIRL-KLLNSHFAILDLVTDAGTYVKEFVHGDLGRTTPYLGSLLGCETDILQLDVLHV 426
BLAST of Gchil834.t1 vs. uniprot
Match: A0A3P3YJ11_PLABS (tRNA pseudouridine(55) synthase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJ11_PLABS) HSP 1 Score: 174 bits (441), Expect = 4.490e-45 Identity = 106/241 (43.98%), Postives = 143/241 (59.34%), Query Frame = 0
Query: 235 VSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHSVRLCELRVAPREYAAEMRAFET---SKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDV 470
+++ V P+L+ +Y K R LSQ+PW + + R TES VQ ++ V A + F + GREDVDVRML GR FVL++ VPSL + L + + + L VAP +YA E + + SKRK YR +++ + AL A L+ + + Q+TP+RVLHRRS R R +Y + R+ N HF VLD+V QAGTY+KEFVHGD GRT PSV + L C ADIVQLDV
Sbjct: 242 IAITVSRQPVLITGKYRKFCRLLSQSPWVIDNKRKTESSVQELIADQVTAFIKCSDIKFHSAGREDVDVRMLGDGRHFVLEMIDPRRVPSLKELEELCLRINNSTDRIEVHSLSVAP-DYAKEFKTLQAGADSKRKSYRAIMWTSAALTDEAVRTLQGSAPIEIQQKTPIRVLHRRSLLSRPRTIYELSITRI-NKHFAVLDLVAQAGTYIKEFVHGDRGRTTPSVGDILTCQADIVQLDV 480
BLAST of Gchil834.t1 vs. uniprot
Match: A0A067D9A4_SAPPC (tRNA pseudouridine(55) synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9A4_SAPPC) HSP 1 Score: 166 bits (419), Expect = 6.590e-42 Identity = 114/277 (41.16%), Postives = 159/277 (57.40%), Query Frame = 0
Query: 201 GAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHV--VPSLVNADALRRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
GA SRAL L +PP R + A ++SV V P+ +A RY+K R LSQTPW + R +S V+ + + +S F GREDVDVRML +GRPF+L+L A V +P+ + A +V A V + EL A +E A +++ SKRK Y CVV+ + L L + + + Q+TP+RVLHRR+ R +V++ V +LNDH+++L + T AGTYVKEFVHGD GRT P+VA L C ADI+QLDV ++
Sbjct: 208 GAVSRALHNLHVLPAGVPSPPT-----RAQSAASISVSVERAPVYVAGRYLKFMRGLSQTPWVLDGERMGDSSVEEAIGDIISPVFGAKSYKFHTAGREDVDVRMLGNGRPFILELLDAKVATLPADMYATVQAQVNAANTDIVEIRELSSATKEGFAALQSGADSKRKTYCCVVWTSGVLTPERVAILNGICDLRVGQKTPVRVLHRRTLLTRPKVIHDASV-ELLNDHYMLLRLTTSAGTYVKEFVHGDLGRTYPNVASLLGCDADILQLDVENL 478
BLAST of Gchil834.t1 vs. uniprot
Match: A0A1V9Z0V9_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0V9_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.140e-41 Identity = 115/277 (41.52%), Postives = 155/277 (55.96%), Query Frame = 0
Query: 201 GAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADAL--RRVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
GA SRAL L A +PP + + + V V P+ +A RY+K R LSQTPW + R +S V+ + + E +S F GREDVDVRML +GRPF+L+L A V A A RV A V + EL A +E A +++ SKRK Y CVV+ + L L + + + Q+TP+RVLHRR+ R +V++ V VLNDH+++L + T AGTYVKEFVHGD GRT P+VA L C ADI+QLDV ++
Sbjct: 203 GAVSRALSGLRSLPAAIPSPPTAV-----QSPATLVVTVERSPVYVAGRYLKYQRGLSQTPWVLDGERMGDSSVEEAIGDVIAPEFRAKSYKFHTAGREDVDVRMLGNGRPFILELLDAKVATLSPEAFATVQNRVNAANLDVVEVRELTGATKEGFAALQSGADSKRKTYCCVVWTSGVLTPARVATLNGIVDLKVAQKTPVRVLHRRTLLTRPKVIHDARV-EVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTFPNVASLLGCDADILQLDVENL 473
BLAST of Gchil834.t1 vs. uniprot
Match: D0NE04_PHYIT (tRNA pseudouridine(55) synthase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NE04_PHYIT) HSP 1 Score: 164 bits (415), Expect = 1.920e-41 Identity = 112/285 (39.30%), Postives = 162/285 (56.84%), Query Frame = 0
Query: 196 PPL--SVGAASRALQALSDEQFATAAPPRVLSLAREREAVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATESVQAVVERAVRAELPF---QSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHS----VRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNAL-RMRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDV 470
PP+ GA SRAL AL+ + +PP L+ A E A D + + RY+K R LSQTPW + R ES +V E LPF S F GREDVDVRML +GRPF+L++ GA++ + D ++Q A + V + +++ + ++Y A ++A SK+K Y CVV+ L A + ++ +++ Q+TP+RVLHRR+ R +++ H VLN H+++L + T AGTYVKEFVH D GRT P++A L C ADI+QLDV
Sbjct: 203 PPVFDGFGAVSRALAALTSMPESIKSPPSRLTTAPEAAA-----SFERDSVYMQGRYLKFQRGLSQTPWVLDGVRMGES--SVEECIGDVALPFFRGSSYKFHTAGREDVDVRMLGNGRPFILEILGAYL-----SEDEYDQIQKAANDANNGAVEIVQVKSSTKDYFAALQAGADSKKKTYCCVVWSEGELTPEAIAKIDSIQDLTIQQQTPVRVLHRRTLMTRPKII-HAAKCEVLNKHYMLLRLTTSAGTYVKEFVHSDRGRTNPNIASILGCDADIIQLDV 474
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2T7CYW3_9POAL (tRNA pseudouridine(55) synthase n=5 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7CYW3_9POAL) HSP 1 Score: 164 bits (415), Expect = 2.850e-41 Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 0
Query: 240 LTDPILLAARYVKLSRALSQTPWHVASPRATE-SVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALR-RVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRM-RHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLN-DHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
L PI + RY+KLSR +SQ+ W + R E SV+ ++ VRA S F A GRED+DVRML GRPF+++L +PS + + R+ ++ K VR+ L++ E MR E K+K Y +++ +R L N + + + + + ++Q+TP+RVLHRRS R R+++ + +V N ++ +L + TQAGTY+KEFVHGD GRT PS+ L C A+I+QLDVT +
Sbjct: 261 LRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 498
BLAST of Gchil834.t1 vs. uniprot
Match: R7U444_CAPTE (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U444_CAPTE) HSP 1 Score: 158 bits (399), Expect = 4.090e-41 Identity = 96/245 (39.18%), Postives = 146/245 (59.59%), Query Frame = 0
Query: 232 AVAVSVRVLTDPILLAARYVKLSRALSQTPWHVASPRATES-VQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALRRVQHALKHS---VRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALR-MRHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLNDHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVT 471
AV ++ L + A RY K SR LSQTPW + R +ES ++ + ++ + F++ GREDVDV+ML G PF++++ H V + N + +R +Q + S + + +L+ RE A ++ ET K KHY + + ++ +F A+ M+ + L Q+TP+RVLHRR +A R R+V H A V++DHF +L +VTQAGTY+KEFVHGD GRT PS+ L DI++L+VT
Sbjct: 34 AVCEPIKCLHESTFFAGRYNKYSRVLSQTPWFIEGVRKSESSIEEYISIPLKEIVKSTETRFSSSGREDVDVKMLGRGLPFIIEVINPHRV--IFNKEHMRILQQKINSSTDEISVRDLQEITREDTALLKEGETEKVKHYSALCWCKDKINAESFTAINAMKDIVLKQKTPIRVLHRRPYACRERMV-HSIAAEVIDDHFCLLKLVTQAGTYIKEFVHGDLGRTVPSMCSLLGTQCDILELNVT 275
BLAST of Gchil834.t1 vs. uniprot
Match: A0A2T7CYL8_9POAL (tRNA pseudouridine(55) synthase n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7CYL8_9POAL) HSP 1 Score: 164 bits (415), Expect = 4.870e-41 Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 0
Query: 240 LTDPILLAARYVKLSRALSQTPWHVASPRATE-SVQAVVERAVRAELPFQSATFTAGGREDVDVRMLHHGRPFVLQLRGAHVVPSLVNADALR-RVQHALKHSVRLCELRVAPREYAAEMRAFETSKRKHYRCVVYVARALDHNAFNALRM-RHVSLLQRTPLRVLHRRSHAVRTRVVYHCCVARVLN-DHFVVLDVVTQAGTYVKEFVHGDHGRTRPSVAERLRCFADIVQLDVTHI 473
L PI + RY+KLSR +SQ+ W + R E SV+ ++ VRA S F A GRED+DVRML GRPF+++L +PS + + R+ ++ K VR+ L++ E MR E K+K Y +++ +R L N + + + + + ++Q+TP+RVLHRRS R R+++ + +V N ++ +L + TQAGTY+KEFVHGD GRT PS+ L C A+I+QLDVT +
Sbjct: 295 LRSPIYIGGRYLKLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICRGDSCKFHAAGREDIDVRMLGSGRPFLVELLNVRSIPSEIEVQQIEDRINNSEKKYVRVRNLKLVGNEIWTMMREGEAEKQKQYAALIWTSRELAENDLHNISVTKDMEIVQKTPIRVLHRRSPLERKRIIHWMQIEKVTNGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGAILGCRAEILQLDVTDV 532 The following BLAST results are available for this feature:
BLAST of Gchil834.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil834.t1 ID=Gchil834.t1|Name=Gchil834.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=498bpback to top |