Gchil7549.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil7549.t1 vs. uniprot
Match: A0A2V3J2B1_9FLOR (General transcription factor IIF subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B1_9FLOR) HSP 1 Score: 484 bits (1246), Expect = 2.530e-170 Identity = 252/323 (78.02%), Postives = 286/323 (88.54%), Query Frame = 0
Query: 1 MSRRGKSKAKRRNSGIPNEPDTSDLIGDTDLSNKDVQVYLVRMPTFLAQQFEDPKHGVIGRLRIPTAQQ-NQNPSPPSKSLNNPNAPRIFLDKQPVPTKTGQIAVKEFELEIQTEKPNIMIFSASRTGENPDMKVEGTAMYQCIARPKMDSTYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQGEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDELKTEKQRQQKRQMLEDHKIAQMEQIRKRXXXXXXXSQATKKTKS 322
MS+R K+++KRR+ +P+EPDTSDLIG+TDLSNKDVQVYLVRMPTFLAQQF++P+HGVIGRLRIPT+QQ N + S P + N P+IFLDKQP PTK GQIAVK +ELEIQT+KPNIMIFS SRT E+PDMK+EGTAMYQCIARP+MD YR + KAR++ ANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQ+EERKR KEASRRHLDVPQGEWRA+LEKSIF SFE KPHYTAEELAR++ EPV RIRPIMNDVCAYIKSGPFSGRYELKDELKTEKQRQQKRQMLEDH++AQ+EQ+RKR +Q TKK++S
Sbjct: 1 MSKRSKNRSKRRSGNVPSEPDTSDLIGNTDLSNKDVQVYLVRMPTFLAQQFQNPQHGVIGRLRIPTSQQGNPHNSAPGVASN---VPQIFLDKQPEPTKNGQIAVKAYELEIQTDKPNIMIFSGSRTREDPDMKIEGTAMYQCIARPRMDGRYRSVTKARSEFANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQKEERKRQKEASRRHLDVPQGEWRAMLEKSIFQSFEMKPHYTAEELARAIGEPVLRIRPIMNDVCAYIKSGPFSGRYELKDELKTEKQRQQKRQMLEDHRLAQLEQVRKRKREMEHDNQTTKKSRS 320
BLAST of Gchil7549.t1 vs. uniprot
Match: R7QPA8_CHOCR (TFIIF_beta domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPA8_CHOCR) HSP 1 Score: 169 bits (427), Expect = 1.320e-47 Identity = 84/203 (41.38%), Postives = 141/203 (69.46%), Query Frame = 0
Query: 104 VKEFELEIQTEKPNIMIFSASRTGENPDMKVEGTAMYQCIARPKMDSTYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQGEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDELKTEKQRQQKRQMLEDHKIAQMEQIRKR 306
V E+++E + E+ +++FS +R GEN DM++EG + IARPKMD+ YR ++K RT +++ ++++ M + R+A +R+ +RP +M ET K RE+RK+ KE +RRHLDVP E++ + ++F +F + HY +EL++ + ++RPI+++VCAY KSGP+ G+Y+LKDE KT QRQQK + L ++ Q+E ++K+
Sbjct: 7 VTEYDIEFKEEETKVIVFSQNRIGENADMRMEGKVSHHGIARPKMDAKYRNVSKRRTLMSHKRNREIVLMGESERRAVQRDEIRPMSMTETLKDREKRKKKKEDARRHLDVPSAEYQKHVRLAVFKAFAIQAHYFGDELSKVTATGMQQLRPIISEVCAYNKSGPYQGQYDLKDEYKTVAQRQQKNRELAAYEQEQLELLQKK 209
BLAST of Gchil7549.t1 vs. uniprot
Match: A0A7S0ZJL6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJL6_9RHOD) HSP 1 Score: 132 bits (331), Expect = 3.100e-32 Identity = 88/319 (27.59%), Postives = 159/319 (49.84%), Query Frame = 0
Query: 7 SKAKRRNSGIPNEPDTSDLIGDTDLSNKDVQVYLVRMPTFLAQQFE---------DPKHGVIGRLRIPTAQQNQNPS---------PPSKSLNNPNAPRIFLDKQPVPTKTGQIAVKEFELEIQTEKPNIMIFSASRTGENPDMKVEGTAMYQCIARPKMDSTYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQ-GEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDELKTEKQRQQKRQMLEDHKIAQMEQIRKR 306
++A R PD G D + +VYL+++P FL + DP ++ +L++P + + PP + AP ++ + Q E+E++ E P ++FS + M+VEG Y C+A+P +D Y +N+ R + A+ +++ MDD++ + A+ + LRP +E+ ++REE++R E +R D P +W+ +F FE KP++ + L E + RI+P++ ++C Y K GP++ YELKDE KT++QR +K + + + AQME +R++
Sbjct: 18 ARAAREVDAALENPDEITPTGHCDTTFAGRKVYLLKLPEFLLTHLQQSATESNTADP---IVAKLKLPNTMDDDAENALKGSIRLLPPKPMQSGSTAPTSSTHEKKERPRIPQ----EYEVKFLPEAPRTLLFSEEPADDKGRMRVEGRVSYHCVAQPVLDEAYLAVNQQRYERASKRNREVALMDDRTLRTAQVDELRPLINVESVREREEKRRRAELMKRGSDAPMDAKWKDTTVAKLFGLFERKPYWGIKALLDETNESMQRIKPLITELCVYNKRGPYAQFYELKDEYKTKRQRDEKDEDVNARRRAQMEAVRQK 329
BLAST of Gchil7549.t1 vs. uniprot
Match: A0A8J4V524_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V524_9MYCE) HSP 1 Score: 70.1 bits (170), Expect = 2.440e-10 Identity = 77/268 (28.73%), Postives = 123/268 (45.90%), Query Frame = 0
Query: 19 EPDTSDLIGDTDLSNKDVQVYLVRMPTFLAQQFEDPKHGVIGRLRIPTAQQNQNPSPPSKSLNNPNAPRIFLDKQPVPTKTGQIAVKEFELEIQT----EKPNIMIFSASRTGENPDMKVEGTAMYQCIARPKMDS-TYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQGEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDELKT 281
E L G+ ++ N D QV+L+++P FLA + + G IG++RI KS +N I L Q VP G +EF+L I T E + IFS G + +EG +C + +DS TYR++ K RT NT T+ +DD R + P+ + TA +++ + R+ D +++ SIF +F H + L + ++P + ++ ++N VC + K GP YELK E K
Sbjct: 3 EESNDALDGEINIDNADNQVWLMKVPKFLADHWAGSQ-GSIGKIRI-------------KSGDN-----ISLTIQ-VP---GTTTTEEFQL-ITTPQNIENQPLKIFSEDAEGA---LALEGNIGLKCDIKMNLDSPTYRELMKTRTTAYNTKTRVAKTIDDNQPFLPPR-PINPKIQVSTAVYAKKKPTTDKKERKSEDQ-------VID-SIFDAFHDNNHLDIKTLVKYTDQPQTWLKTVLNKVCIFNKRGPNKNTYELKPEYKN 234
BLAST of Gchil7549.t1 vs. uniprot
Match: A0A0L0HVX9_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HVX9_SPIPD) HSP 1 Score: 63.9 bits (154), Expect = 7.230e-8 Identity = 58/254 (22.83%), Postives = 110/254 (43.31%), Query Frame = 0
Query: 31 LSNKDVQVYLVRMPTFLAQQFE--DPKHGVIGRLRIPTAQQNQNPSPPSKSLNN--PNAPRIFLDKQPVPTKTGQIAVKEFELEIQTEKPNIMIFSASRTGENPDMKVEGTAMYQCIARPKMDSTYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQGEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDELK 280
L N D QV+LV++P FLA+++ + + +G + +P + S++ NN N + L QP K + L KP T ++ G +++ P +D YR++ + R ++ + + + +D K + + E RK+ ++ + ++ R L IF +F+ PH+T + L ++P + ++ ++ND+ K GP+ G YELK E K
Sbjct: 46 LDNADTQVWLVKVPKFLAEKWASVEMEDQELGSIDVPAFNSS------SRNFNNGTSNKASVHLPAQP----WADDIPKNYTLTFTNLKPQSEYIFTEDTSTGRAKELVGKVIHEGTIAPVIDDDYRQLMQRRAQMVSDKKRNIKMIDVKGDRGHTWITPVNDVIKEKGFGLMARKKPQQDKKERVE------RTELVNMIFEAFQKYPHWTFKGLVERTQQPQAWLKEVLNDLALLHKRGPYVGTYELKPEFK 283
BLAST of Gchil7549.t1 vs. uniprot
Match: G0N387_CAEBE (General transcription factor IIF subunit 2 n=2 Tax=Caenorhabditis TaxID=6237 RepID=G0N387_CAEBE) HSP 1 Score: 60.5 bits (145), Expect = 6.800e-7 Identity = 52/252 (20.63%), Postives = 117/252 (46.43%), Query Frame = 0
Query: 38 VYLVRMPTFLAQQFEDPKHGVIGRLRIPTAQQNQNPSPPSKSLNNP----NAPRIFLDKQPVPTKTGQIAVKEFELEIQTEKPNIMIFSASRTGENPD-------MKVEGTAMYQCIARPKMDSTYRKMNKARTKIANTHTKQLLRMDDKSRKAAEREALRPQTMMETAKQREERKRLKEASRRHLDVPQGEWRAILEKSIFHSFEAKPHYTAEELARSVEEPVSRIRPIMNDVCAYIKSGPFSGRYELKDE 278
++LV++P +L++ ++ + GV+G+L+I + + +K LN P + P+P++ +I + + + + S +TG + + +EG + + RP S Y KM A + NT K+ ++M DK+ + ++ + M+ + +++ K + R +L +S+F +FE +Y ++L + +++PVS ++ ++ ++ Y + P + LK E
Sbjct: 20 IWLVKVPRYLSELWDANEGGVVGKLQIGAQVEFHS----AKGLNPPKPKDDGEGTSSTTAPMPSEASEIPTQYSFILNDVRGQTMSLLSEDKTGLGSEAAVKTGKLAIEGRIIKKAECRPPATSKYMKMKLAHI-VKNTQPKKTVKMIDKAAVKFKPVSVHAEDMIRSKAKKDGAKTYRAD------------RDVLRQSLFKAFEKHSYYRLQDLQQLLQQPVSYVKEVLQEIAVYNTAPPHKSLWCLKPE 254 The following BLAST results are available for this feature:
BLAST of Gchil7549.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil7549.t1 ID=Gchil7549.t1|Name=Gchil7549.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=323bpback to top |