Gcaud1600.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1600.t1 vs. uniprot
Match: A0A2V3IEU1_9FLOR (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU1_9FLOR) HSP 1 Score: 414 bits (1063), Expect = 7.630e-146 Identity = 195/218 (89.45%), Postives = 209/218 (95.87%), Query Frame = 0
Query: 1 MIAFVSGFAGIPATRASAFNGASFSVRHAPVRTARFSMDASKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWFGGYYVH 218
M AFVSGFAG+PATRAS+FNGA FS H+PVRTARFSM ASKSVPFLPQPAKLDG++PGDVGFDPLGFSDMFD+NFLREAEVKHGRICMLAIVGWVFPEAVYHLPNE+YSA+NPL A+ KVGWLP++QILLFIA CEAATGYKKVYEQKCEDPGN+GFDPLNLAGTPEKKKR+QTAEIKNGRLAMVAIGGAIHH LLTNMGLVEQIQSG+WFGGYYVH
Sbjct: 1 MFAFVSGFAGLPATRASSFNGAQFSQTHSPVRTARFSMAASKSVPFLPQPAKLDGTLPGDVGFDPLGFSDMFDLNFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEMYSATNPLDAIGKVGWLPVIQILLFIAACEAATGYKKVYEQKCEDPGNFGFDPLNLAGTPEKKKRRQTAEIKNGRLAMVAIGGAIHHALLTNMGLVEQIQSGRWFGGYYVH 218
BLAST of Gcaud1600.t1 vs. uniprot
Match: R7QMN6_CHOCR (Light-harvest protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMN6_CHOCR) HSP 1 Score: 316 bits (809), Expect = 3.560e-107 Identity = 154/218 (70.64%), Postives = 179/218 (82.11%), Query Frame = 0
Query: 1 MIAFVSGFAGIPATRASAFNGASFSVRHAPVRTARFSMDASKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWFGGYYVH 218
MIAFVSGFAG R++AF+G S S R APV A SM SKS+P++ +PAKLDGS+PGDVGFDPLG S+MF+++FLREAEVKHGRICMLAIVGWVFPE VYHLPN YS +NPL AV VG+LP +QILLF+AVCEAA YKKVYEQ CE+PG++G DPL + TPE+K Q AEIKNGRLAM+AIGGAIHH LLTN+GL EQIQSG + GGYY+H
Sbjct: 1 MIAFVSGFAGASVARSNAFSGTSVSTRSAPV-VANVSMSMSKSIPYMERPAKLDGSLPGDVGFDPLGISNMFELDFLREAEVKHGRICMLAIVGWVFPEMVYHLPNAAYSVTNPLYAVPSVGFLPCIQILLFMAVCEAAA-YKKVYEQNCENPGDFGIDPLGFSKTPERKAHYQLAEIKNGRLAMIAIGGAIHHALLTNVGLWEQIQSGMYTGGYYIH 216
BLAST of Gcaud1600.t1 vs. uniprot
Match: Q7XY92_GRIJA (Light-harvest protein (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY92_GRIJA) HSP 1 Score: 298 bits (763), Expect = 2.530e-100 Identity = 143/202 (70.79%), Postives = 164/202 (81.19%), Query Frame = 0
Query: 17 SAFNGASFSVRHAPVRTARFSMDASKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWFGGYYVH 218
+AF GA+ S AP + ARFSMDAS SVPFL +P KLDGS+PGDVGFDP GFS+ F++NFLREAE+KHGRICMLAI+GWVFPE V HLPNE YSA+NPL AV VGWLPI+QIL FIA+CEA G KVY++ C +PGNYGFDP L P+ K+ + AEIKNGRLAM AIGGAIHH LL N+GLVEQI SGKWFGGYY+H
Sbjct: 7 TAFAGAAVSRAAAPAK-ARFSMDASASVPFLERPPKLDGSLPGDVGFDPCGFSNAFELNFLREAELKHGRICMLAILGWVFPELVGHLPNEAYSATNPLYAVGSVGWLPIIQILAFIAICEA-KGVAKVYDENCANPGNYGFDPFGLTANPKTKQHYELAEIKNGRLAMCAIGGAIHHALLRNVGLVEQITSGKWFGGYYLH 206
BLAST of Gcaud1600.t1 vs. uniprot
Match: A0A1X6NK41_PORUM (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A1X6NK41_PORUM) HSP 1 Score: 200 bits (509), Expect = 1.900e-61 Identity = 107/210 (50.95%), Postives = 135/210 (64.29%), Query Frame = 0
Query: 11 IPATRASAFNGASFSVRHAPVRTARFSM----DASKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWFGGYY 216
+ A+ S+F GA F AP A +ASKSVPF +PA LD S GDVGFDPLGFS+ FD+ +L EAE+KH RI ML +G +FPE YHLPN YS +NPL AV VG+ P+ QILLF+ V EA + Y+K+ G++GFDPL LA +KR +E+KNGRLAM+A GG IHH L+T+ G + QIQ G + GG Y
Sbjct: 16 VAASATSSFAGARFVRAAAPTAAATIDTTIRAEASKSVPFWERPASLDKSYAGDVGFDPLGFSNAFDLKWLVEAELKHCRIAMLGALGMIFPE-FYHLPNAAYSQTNPLAAVPSVGFAPVAQILLFMVVLEAIS-YQKINYNPSAPAGDFGFDPLGLAKNESARKRFALSEVKNGRLAMIACGGMIHHALITHQGPITQIQQGHFIGGDY 223
BLAST of Gcaud1600.t1 vs. uniprot
Match: A0A7S2ZNU9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNU9_9RHOD) HSP 1 Score: 194 bits (492), Expect = 4.310e-59 Identity = 107/208 (51.44%), Postives = 138/208 (66.35%), Query Frame = 0
Query: 2 IAFVSGFAGIPATRASAFNGASFSVRHAPVRTARFSMDASKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSG 209
+AFVS G+ T++S F+G+ R P A +M S SVPFL LD S P FDPLGFS M+D+ FL+EAE+KHGRICMLA++GWVFPE V HLP +++S +NPL A ++V ++QILLFI CEA + + K+Y + +PG YGFDPLNL + + AEIKNGRLAM+AIGG IH LLT G+ QI+SG
Sbjct: 1 MAFVS---GVTVTKSS-FHGSRVCAR-VPKSAATITMKGSASVPFLDSVKTLDPSAPAFADFDPLGFSSMYDLKFLQEAEIKHGRICMLAVLGWVFPEFV-HLPADVFSNTNPLAAFNQVPKAGLLQILLFILACEAIS-FDKIYYTENWEPGVYGFDPLNLGKNDKSLAWYKAAEIKNGRLAMIAIGGFIHQALLTKQGVFAQIKSG 201
BLAST of Gcaud1600.t1 vs. uniprot
Match: Q9FEM0_GALSU (Light-harvesting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q9FEM0_GALSU) HSP 1 Score: 191 bits (484), Expect = 8.990e-58 Identity = 92/168 (54.76%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 41 SKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQS 208
SK++PF P+P +LD SMPG GFDPLGFSD FD+ FL+EAE+KH RICMLA +GWVFPE +HLP+E++S ++PL A+ +V ++QILL + EA + K + + ++PG++GFDPL L G + KK QTAEIKNGRLAM+A+G H LLTN G++EQ++S
Sbjct: 44 SKAIPFFPKPERLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALGWVFPE-FWHLPSEVFSNTSPLAALGQVPKFGLIQILLLVVALEAISLDKLEFHPE-KEPGDFGFDPLGL-GKGKSKKWMQTAEIKNGRLAMIAMGAFFHQNLLTNQGVIEQLKS 208
BLAST of Gcaud1600.t1 vs. uniprot
Match: M2X090_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X090_GALSU) HSP 1 Score: 189 bits (481), Expect = 2.560e-57 Identity = 92/172 (53.49%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 41 SKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWF 212
SK++PF P+PA+LD SMPG GFDPLGFSD FD+ FL+EAE+KH RICMLA +GWV PE +HLP+E++S ++PL A+ +V L ++QILL + EA + K + + ++PG++GFDPL L G KK QTAE+KNGRLAM+A+G H LLTN G+ EQ+++ +F
Sbjct: 44 SKAIPFFPKPARLDESMPGYAGFDPLGFSDKFDVKFLQEAEIKHCRICMLAALGWVVPE-FWHLPSEVFSNTSPLAALGQVPKLGLIQILLLVLALEAISLDKITFHPE-KEPGDFGFDPLGL-GKGNAKKWMQTAELKNGRLAMIAMGAFFHQNLLTNQGIFEQLRTHNFF 212
BLAST of Gcaud1600.t1 vs. uniprot
Match: P93449_PORPP (Light-harvesting complex I polypeptide n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=P93449_PORPP) HSP 1 Score: 179 bits (453), Expect = 4.780e-53 Identity = 102/217 (47.00%), Postives = 141/217 (64.98%), Query Frame = 0
Query: 3 AFVSGFAGI-PATRASAFNGASFSVRHA-PVRTARFSMDA--SKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAV----YHLPNEIYSASNPLMAVSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKW 211
AFVSG G P + +A S SV+ A PV+ R +M A SKS+PFL +P LDGSM GDVGFDPLGFSD +D+ FLREAE+KHGRICMLA +G+++PE + P ++ NPL AV + ++QI+LF+ V EA + + KV+ K PG++ FDPL L K + + +E+KNGRLAM+A+GG IH LLT ++ Q+++G +
Sbjct: 4 AFVSGGRGAGPVDKVAAIQ--SKSVKAAVPVKAGRIAMMAEMSKSIPFLEKPKNLDGSMAGDVGFDPLGFSDKWDVKFLREAELKHGRICMLAALGFIYPEIMGGKSIPSPEGYFTELNPLKAVKAIPTAGLLQIVLFVMVLEAIS-WNKVFMDKTSAPGDFKFDPLGL-----KSPKMELSEVKNGRLAMIAVGGMIHQVLLTKQPILAQLKNGPY 212
BLAST of Gcaud1600.t1 vs. uniprot
Match: L1ID46_GUITC (Light-harvesting Chl a protein 3 n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1ID46_GUITC) HSP 1 Score: 176 bits (446), Expect = 4.830e-52 Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 0
Query: 41 SKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMA---VSKVGWLPIVQILLFIAVCEAATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWF 212
S+++PFL +P KLD SMPG GFDPLGFSD +D+ +L+EAE+KHGRICMLA+VG PE + LP ++NPL A +S GWL QI +FI +CE+ + K Y K PG+ GFDPL L P +K AE+KNGRLAM+ GG +HH LLT MG +QI K++
Sbjct: 42 SEAIPFLEKPKKLDSSMPGYAGFDPLGFSDYYDVKWLQEAEIKHGRICMLAVVGMFHPE-IAKLPQFASFSTNPLEAFYQLSFAGWL---QIFVFIGICESFSFEKVYYTDKA--PGDLGFDPLRLGSNPASRKYYANAEVKNGRLAMIGFGGMLHHALLTKMGPFQQIAEQKFY 210
BLAST of Gcaud1600.t1 vs. uniprot
Match: Q8RW55_GALSU (Light-harvesting protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q8RW55_GALSU) HSP 1 Score: 175 bits (444), Expect = 1.030e-51 Identity = 89/175 (50.86%), Postives = 120/175 (68.57%), Query Frame = 0
Query: 41 SKSVPFLPQPAKLDGSMPGDVGFDPLGFSDMFDINFLREAEVKHGRICMLAIVGWVFPEAVYHLPNEIYSASNPLMAVSK-VGWLPIVQILLFIAVCE--AATGYKKVYEQKCEDPGNYGFDPLNLAGTPEKKKRQQTAEIKNGRLAMVAIGGAIHHTLLTNMGLVEQIQSGKWF 212
SK++PFL +P LDGSM GDVGFDPL S D+ +LRE+E+KH RI MLA+VGW F + V+HLPN IYSAS+P A K + P+ QI+L+ + E + ++ + +PG +GFDPL L P+ KR Q +E+KNGRLAM+AIGG IH + LT+MG ++Q+Q KWF
Sbjct: 46 SKAIPFLDRPPALDGSMVGDVGFDPLNISSYLDLRWLRESELKHCRIAMLAVVGW-FVQEVFHLPNXIYSASDPTEAFWKTLATGPMGQIVLWTSFFEIISTPAVIQMLQGSGREPGYFGFDPLGLGKNPQLYKRFQLSELKNGRLAMIAIGGLIHQSFLTHMGAIQQLQQHKWF 219 The following BLAST results are available for this feature:
BLAST of Gcaud1600.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1600.t1 ID=Gcaud1600.t1|Name=Gcaud1600.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bpback to top |