Gcaud2599.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A2V3IWI4_9FLOR (ATP-dependent RNA helicase DEAH11, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI4_9FLOR) HSP 1 Score: 499 bits (1284), Expect = 3.810e-171 Identity = 241/472 (51.06%), Postives = 308/472 (65.25%), Query Frame = 0
Query: 1 MAAPETDYLLALRMQLRENGAGDFDVADMLGLDTHAHTSYETLRSQAVAQSLEASNQLVASDSKFARNLAASQHGLDLDKCIAQLEPDQCASQDER---TVECQICFDEFLPQLAFASKDCKHHFCYPCFVQYLRLVIERGHPYPITCPSCRTVWDNQTCLTALSGTGDDYHALERLIINKDYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSVLTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCGMAYMSLEPTSENVHGMPGCRCALFPPADVEQPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPVPVVXXXXXYPGVIGPNGHVNVEKCLGEEGPRE-MGGPLPGAMLDCLANAVCPYEECGLKFQSVRSLEQHLAFVQRHEVYLCCERPFYQYASLRNHQVNNH 468
M+ +DYL+AL++QL+ENGA DF+ +L ++ SY + +A +LEA+N+ + D AR +AA ++GL +D + Q +S T ECQICF+ F+P + F S C H FC+ C QYL+LV++RGHPYPI CPSCR + N+ CL+ALSGTG +Y ALERLIINKD+TK+IRYCANSKCA PFDW+ D+AG ++ + ARV+CPFCDTETCA+CRCVWHED+TCEE+++++D+E LSVL+R W RCPDCGHLIEKR GDCAFV C CGCGFCH CG AY SL+PT +NVHG PGCRCALFP + X + + + G+ GPNG VN+ CL EG + MG PLP AM+ L N CPYEEC +KF+S+R+LEQHLAFVQRH+V+LCC RPFY AS+ NH NNH
Sbjct: 1 MSTAASDYLVALKLQLQENGADDFNSLHVLSTNSDESLSYHPNQDLVLAYTLEAANRRIVEDYALARAIAAKENGLPVD--VEDQNKHQLSSTKNAKHATSECQICFEAFVPNMTFNSGTCDHTFCFSCMSQYLKLVVQRGHPYPINCPSCRVIIPNEKCLSALSGTGKEYEALERLIINKDFTKRIRYCANSKCAMPFDWVFDNAGAHDVREQARVMCPFCDTETCALCRCVWHEDQTCEEHSLQKDMEELSVLSRQNNWRRCPDCGHLIEKRTGDCAFVTCKCGCGFCHTCGSAYTSLDPTWDNVHGRPGCRCALFPEPEEXXXXXXXALPVDNILPRRIARRLNIIAPENDVVPEDAVDVPVRANARANVIAPERIYHDGLWGPNGRVNLRLCL--EGRHQFMGAPLPQAMIQSLENWTCPYEECEVKFRSLRALEQHLAFVQRHQVHLCCARPFYTCASMMNHIRNNH 468
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A2K2A129_POPTR (Uncharacterized protein n=4 Tax=Saliceae TaxID=238069 RepID=A0A2K2A129_POPTR) HSP 1 Score: 97.1 bits (240), Expect = 4.050e-19 Identity = 64/237 (27.00%), Postives = 100/237 (42.19%), Query Frame = 0
Query: 86 EPDQCASQDERTVECQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINK--DYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCGMAYMSLEPTSENVHGMPGCRCALF 315
EP Q +++ C+IC + L F + CKH FC C +Y+ + +E I CP +C+ + D +C +S + I K D+ + C P+ + ++ ++ CP C C +C+ WH C E +D + V L KKW RC +CGH +E+ +G C ++C CG FCH CG + P S G C +F
Sbjct: 15 EPGQLQQEEDSNFTCEICIEPMLAIRKFKNGSLCKHPFCLDCIAKYIEVKVEETTGC-IECPGLNCKQLLDPLSCNCIIS----------KPIFEKWCDHLCDSTVLGSESCYCPYQDCSVLVLNECRDKLTKIKCPNCKKSFCFLCKIPWHAGYQCNESRHLRDRNDILVGELIEEKKWTRCYNCGHSVERVSG-CRDMKCKCGVRFCHQCGGPF-HFGPCSHRRCGAVLCNLFIF 238
BLAST of Gcaud2599.t1 vs. uniprot
Match: UPI000772A9BB (probable E3 ubiquitin-protein ligase RNF217 isoform X1 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI000772A9BB) HSP 1 Score: 89.7 bits (221), Expect = 1.480e-16 Identity = 63/222 (28.38%), Postives = 97/222 (43.69%), Query Frame = 0
Query: 100 CQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINKDYTKKIR-YCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCGMAYMSLEPTSENVHGMPGCRCALF 315
C+IC + L F + C H FC C +Y+ + +E G I CP SC+ D +C + +S D L+ + + R YC C+ ++++ + + ++ CP C C +C+ WH C E +D + + L KKW RC +CGH +E+ +G C V+C CG FCH CG + L P G C F
Sbjct: 29 CEICIEPMLSNKKFENASLCTHPFCLDCISKYVEVKVE-GFIGNIKCPGTSCKHPLDPLSCRSIISKPVFDKWC--DLLCDSVVSGVERCYCPYRDCSAL---VLNECKDK----LKKIKCPNCKKNLCYVCKIPWHAGYQCNESGQLRDRNDVLIGELIEEKKWTRCYNCGHSVERVSG-CRDVKCKCGVRFCHQCGGRF-HLGPCKHKCCGDAFCMLLFF 238
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A5N5KI13_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5KI13_9ROSI) HSP 1 Score: 89.4 bits (220), Expect = 4.670e-16 Identity = 59/214 (27.57%), Postives = 93/214 (43.46%), Query Frame = 0
Query: 86 EPDQCASQDERTVECQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDY---HALERLIINKDYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCG 291
EP +++ C+IC + L F + C+H FC C +Y+ + +E I CP +CR D +C +S + H + ++ + YC C+ +V + N+ +I CP C C +C+ WH C E +D + L KKW RC +CGH +E+ +G C ++C CG FCH CG
Sbjct: 15 EPGLLQQEEDSNFTCEICTEPMLAISKFKNGSLCQHPFCLDCVAKYIEVTVEETTGC-IECPGLNCRQPLDPISCRRIISKPIFEKWCDHLCDSTVLGSESC----YCPYRDCSA----LVLNECRDNLKKIK---CPNCKKNFCFLCKIPWHAGYRCNESRHLRDRNDILAGELIEEKKWTRCYNCGHSVERVSG-CRDIKCKCGVQFCHQCG 215
BLAST of Gcaud2599.t1 vs. uniprot
Match: B9SWE7_RICCO (Zinc finger protein, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9SWE7_RICCO) HSP 1 Score: 88.2 bits (217), Expect = 4.700e-16 Identity = 58/198 (29.29%), Postives = 91/198 (45.96%), Query Frame = 0
Query: 100 CQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINKDYTKKIR-YCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCG 291
C+IC + L F + C H FC C +Y+ + +E G I CP SC+ D +C + +S D L+ + + R YC C+ ++++ + + ++ CP C C +C+ WH C E +D + + L KKW RC +CGH +E+ +G C V+C CG FCH CG
Sbjct: 29 CEICIEPMLSNKKFENASLCTHPFCLDCISKYVEVKVE-GFIGNIKCPGTSCKHPLDPLSCRSIISKPVFDKWC--DLLCDSVVSGVERCYCPYRDCSAL---VLNECKDK----LKKIKCPNCKKNLCYVCKIPWHAGYQCNESGQLRDRNDVLIGELIEEKKWTRCYNCGHSVERVSG-CRDVKCKCGVRFCHQCG 215
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A834LAS7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LAS7_RHOSS) HSP 1 Score: 85.5 bits (210), Expect = 3.370e-15 Identity = 54/179 (30.17%), Postives = 77/179 (43.02%), Query Frame = 0
Query: 100 CQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHA---LERLIINKDYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLS--VLTRAKKWMRCPDCGHLIEK 270
C+IC + L F + C H FC C +YL+L I+ I CP +C + D C T + D E+ ++ D C N +C+ +V++ GG + R +CP C C C WH CEE +D + VL KKWMRCP C H +E+
Sbjct: 34 CEICIEPMLSNYKFHNNSLCVHPFCVDCITEYLQLKIKDDRVAGIKCPGLNCDQLLDPLCCRTLIPPEAFDKWCDLLCEKALLGVDRC----CCPNWRCSAV---VVNECGGM----VKRSMCPNCKRLFCFSCELPWHAGSRCEESGQLRDENDVEFGVLAERKKWMRCPQCHHCVER 201
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A6A4KWF6_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4KWF6_9ERIC) HSP 1 Score: 83.2 bits (204), Expect = 1.220e-14 Identity = 58/188 (30.85%), Postives = 86/188 (45.74%), Query Frame = 0
Query: 100 CQICFDEFLP-QLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALS-GTGDDYHAL--ERLIINKDYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSVLTRAKKWMRCPDCGHLIEKRAGDCAFVRC 280
C+IC + + F + + C H FC C +Y+R IE I CP +C + D C + G D + L ER ++ D YC N C+ +V++ GG + + +CP C C CR WH CEE D+ + R KKWMRCP+C H +E+ G C+ ++C
Sbjct: 13 CEICIEPMSSNKKKFQNNNLCVHPFCKECIAKYVRFKIEDERVAGIKCPGSNCDKLLDPLCCRALIPPGAFDRWCDLLCERALLGLDRC----YCPNRDCSAV---VVNECGGI----VKKSMCPNCKEWFCFKCRVTWHAGYLCEELRDWSDVAFADFVAR-KKWMRCPNCRHCVERVHG-CSIIKC 187
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A2C9W0N2_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W0N2_MANES) HSP 1 Score: 80.5 bits (197), Expect = 2.260e-13 Identity = 55/206 (26.70%), Postives = 93/206 (45.15%), Query Frame = 0
Query: 93 QDERTVECQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIER--GHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINKDYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAGDCAFVRCTCGCGFCHYCG 291
+++ C+IC + F + C H FC C +Y+ + +E G+ I CP +C+ D +C + +S D E L + + + YC C+ ++++ + + ++ CP C C C+ WH C E +D + + L KKW RC +CGH +E+ +G C ++C CG FCH CG
Sbjct: 21 EEDSNFTCEICIEPTESNRKFKNGGLCCHPFCLDCISKYINVKVEAITGN---IECPGLNCKHALDPLSCRSIVSKQLFDKWC-ELLCDSVVLSFERCYCPYRDCSAL---VLNECKDK----LKKIKCPNCKKNFCFRCKLPWHAGYQCNESGQLRDSNDILIGELIEEKKWTRCYNCGHSVERVSG-CRDIKCKCGVRFCHQCG 214
BLAST of Gcaud2599.t1 vs. uniprot
Match: UPI00057AD1A5 (probable E3 ubiquitin-protein ligase RNF217 isoform X1 n=1 Tax=Populus euphratica TaxID=75702 RepID=UPI00057AD1A5) HSP 1 Score: 80.9 bits (198), Expect = 2.320e-13 Identity = 51/195 (26.15%), Postives = 83/195 (42.56%), Query Frame = 0
Query: 86 EPDQCASQDERTVECQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINK--DYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAG 273
EP Q +++ C+IC + L F + CKH FC C +Y+ + +E Y I CP +C+ + D +C +S + I K D+ + C P+ + ++ ++ CP C C +C+ WH C E +D + V L KKW RC +CGH +E+ +G
Sbjct: 15 EPGQIQQEEDSNFTCEICIEPMLAIRKFKNGSLCKHPFCLDCVAKYIEVKVEETTGY-IECPGLNCKQLLDPLSCNCIIS----------KPIFEKWCDHLCDSTVLGSESCYCPYQDCSVLVLNECRDKLKKIKCPNCKKSFCFLCKIPWHAGYQCNESRHLRDRNDILVGELIEEKKWTRCYNCGHSVERVSG 198
BLAST of Gcaud2599.t1 vs. uniprot
Match: A0A2K2A133_POPTR (Uncharacterized protein n=2 Tax=Populus trichocarpa TaxID=3694 RepID=A0A2K2A133_POPTR) HSP 1 Score: 78.2 bits (191), Expect = 1.760e-12 Identity = 50/195 (25.64%), Postives = 82/195 (42.05%), Query Frame = 0
Query: 86 EPDQCASQDERTVECQICFDEFLPQLAFASKD-CKHHFCYPCFVQYLRLVIERGHPYPITCP--SCRTVWDNQTCLTALSGTGDDYHALERLIINK--DYTKKIRYCANSKCATPFDWIVDDAGGQNIAQIARVLCPFCDTETCAICRCVWHEDETCEEYAIRQDLESLSV--LTRAKKWMRCPDCGHLIEKRAG 273
EP Q +++ C+IC + L F + CKH FC C +Y+ + +E I CP +C+ + D +C +S + I K D+ + C P+ + ++ ++ CP C C +C+ WH C E +D + V L KKW RC +CGH +E+ +G
Sbjct: 15 EPGQLQQEEDSNFTCEICIEPMLAIRKFKNGSLCKHPFCLDCIAKYIEVKVEETTGC-IECPGLNCKQLLDPLSCNCIIS----------KPIFEKWCDHLCDSTVLGSESCYCPYQDCSVLVLNECRDKLTKIKCPNCKKSFCFLCKIPWHAGYQCNESRHLRDRNDILVGELIEEKKWTRCYNCGHSVERVSG 198 The following BLAST results are available for this feature:
BLAST of Gcaud2599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2599.t1 ID=Gcaud2599.t1|Name=Gcaud2599.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=476bpback to top |