Gcaud2535.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A2V3IFX8_9FLOR (General transcriptional corepressor tupA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX8_9FLOR) HSP 1 Score: 163 bits (412), Expect = 3.940e-41 Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 0
Query: 152 SHRTCPDEDWGFTFEKFPLDSKPEFNLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTL 330
S + +DW T + SK LNLQ TLPH SVV CVRYSW+G LATGS R +++DA +G + F+ + S P P S YVR+VCFSPDG L+TG++DHV+ VWD++SR + HR I + +++SVD S+ S+FI+S SG++ AKLWNL+TG L+STL
Sbjct: 454 SQQPSQPDDWTVTQGRTANGSKVNMKLNLQYTLPHGSVVCCVRYSWDGMFLATGSNRSADIYDAQTGHKVATFSKDMSAEPTEMQTPDS------------YVRAVCFSPDGNWLITGAEDHVVKVWDVRSRTVKHRLIGHSTDIYSVDASANSQFIISGSGDKRAKLWNLETGALMSTL 621
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A1X6PBN5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBN5_PORUM) HSP 1 Score: 134 bits (337), Expect = 5.300e-32 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 0
Query: 178 LNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDS-----PRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTL 330
+ L + H+SVV CVRYS++G+ LATGS RC ++F+A SGQ + AF ED S A+ YVR+VCF+PDG+ LVTG++DHV+ VWD+++R + H + +++SVD S+ +FI S SG++ AKLW+L+TG LL+TL
Sbjct: 137 VTLHNSFVHDSVVCCVRYSFDGQYLATGSNRCAHIFEAASGQRVAAFDREDGVGXXXXXXXXXXXGTGGSGAD------SYVRAVCFTPDGESLVTGAEDHVVKVWDVRNRTVRHSFVGHETDIYSVDASTDGRFIASGSGDKTAKLWSLQTGLLLTTL 289
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A7S0XJM1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJM1_9RHOD) HSP 1 Score: 126 bits (317), Expect = 3.970e-29 Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 0
Query: 177 NLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTG 324
N+ LQ T HESVV CVRYSWNG+ LATGS R VFDA+SG L F+ E S N D+ + YVR+VCFSPDGK L+TG++DHV+ VWD++SR + HR + +++SVD S + A LW L++G
Sbjct: 335 NIKLQNTFQHESVVCCVRYSWNGQYLATGSNRYAQVFDASSGNKLAEFSGE------------SGGNGGDSQD--SYVRAVCFSPDGKWLITGAEDHVVKVWDVRSRTMKHRLVGHETDIYSVDASXXXXXXXXXXXXKRAILWGLQSG 469
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A7S0ZG95_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG95_9RHOD) HSP 1 Score: 128 bits (321), Expect = 4.250e-29 Identity = 68/155 (43.87%), Postives = 94/155 (60.65%), Query Frame = 0
Query: 177 NLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTL 330
N+ LQ + HESVV CVRYSWNG+ LATGS R VFDAN+G+ + +A +D P S +D+ YVR+VCFSPDGK L+TG++DH++ VWD+++R + HR I +++SVD S A LW+L++G L TL
Sbjct: 347 NIKLQNSYQHESVVCCVRYSWNGQYLATGSNRYAQVFDANTGKKIATYARDDEP----------GSETQDS-----YVRAVCFSPDGKWLITGAEDHMVKVWDVRNRTVKHRLIGHETDIYSVDASXXXXXXXXXXXXXNAILWSLQSGKKLMTL 486
BLAST of Gcaud2535.t1 vs. uniprot
Match: R7QRF1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRF1_CHOCR) HSP 1 Score: 126 bits (316), Expect = 2.550e-28 Identity = 79/199 (39.70%), Postives = 105/199 (52.76%), Query Frame = 0
Query: 133 SSQGRAVMEQSGTREPSDASHRTCPDEDWGFTFEKFPLDSKPEFNLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHRIE-ETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTL 330
S+ GRA M ++ P R D DW E + + LQ TL SVV CVRYSW+G LATGS R +VF+AN+G + +FA E P P R ED N+ YVR+VCFSPDG L+TG++DHV+ VWD++SR++ HR+E +++SVD S +TG LL TL
Sbjct: 434 SAGGRAEMLRTTVGMPLSGP-RPLTDPDWTVYHEPSATRAVVNTEIRLQNTLELNSVVCCVRYSWDGAYLATGSNRVAHVFNANTGAIIASFAKE--PAPER----------EDGNSPDSYVRAVCFSPDGNWLITGAEDHVVKVWDVRSRQVKHRLEGHGTDIYSVDASXXXXXXXXXXXXXXXXXXXXETGKLLRTL 619
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A2V3J4E9_9FLOR (General transcriptional corepressor tupA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E9_9FLOR) HSP 1 Score: 120 bits (301), Expect = 1.760e-26 Identity = 73/197 (37.06%), Postives = 104/197 (52.79%), Query Frame = 0
Query: 139 VMEQSGTREPSDASHRTCPDEDW----GFTFEKFPLDSKPEFNLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTL 330
+ S PS A H DW G T P++ K ++LQ T+P +SVV CVRYSW+G+ LATGS ++FDAN+G + F+ +D+ P +HG YVR+VCFSPDG L+TG++D ++ VWD++SR++ HR I +++SVD S+ TG LLSTL
Sbjct: 278 ISPPSANPPPSQAEH------DWYVFQGHTHTGAPVNMK----VSLQHTIPLDSVVCCVRYSWDGQFLATGSNHAAHIFDANTGNRVATFS-KDNGAPEEHHGTD------------RYVRAVCFSPDGNWLITGAEDRMVRVWDVRSRKVKHRLIGHGTDIYSVDASAXXXXXXXXXXXXXXXXXXXXTGKLLSTL 451
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A7S1XH44_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH44_9RHOD) HSP 1 Score: 119 bits (298), Expect = 4.480e-26 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0
Query: 177 NLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHRIE-ETANVFSVD 299
N+ LQ T H SVV CVRYSWNG LATGS RC +V DA SG + F+ +D P N E N YVR+VCFSPDGK L+TG++DHV+ VWD+++R + + ++ A+++SVD
Sbjct: 309 NIKLQNTFNHNSVVCCVRYSWNGLYLATGSNRCAHVLDATSGARIATFSKDDGTEPDAN---------ESNTIPDSYVRAVCFSPDGKWLITGAEDHVVKVWDVRNRTVKYHLQGHDADIYSVD 423
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A5J4YTT5_PORPP (General transcriptional corepressor tupA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTT5_PORPP) HSP 1 Score: 119 bits (298), Expect = 5.530e-26 Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 0
Query: 177 NLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPR---------PMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHR-IEETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTLHDHDHRSDKNFCVA 344
N+ LQ T+PHESVV CVRYSWNG+ +ATGS R +FDA +G H+ F + D P + GP S+S Y R+VCFSPDGK LVTGS+D + +WD++SR + HR + +++SV+ L++G L TL D + FC A
Sbjct: 392 NIKLQNTIPHESVVCCVRYSWNGQYIATGSNRYAMMFDAATGGHVATFGNTDDANIGGGGDVAPPGSDGGPDSASTEN-------YFRAVCFSPDGKYLVTGSEDRAVRIWDIRSRTVKHRLVGHATDIYSVETXXXXXXXXXXXXXXXXXXXXLQSGHKLRTLEDTE------FCPA 556
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A2V3INM8_9FLOR (General transcriptional corepressor tupA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM8_9FLOR) HSP 1 Score: 106 bits (264), Expect = 1.080e-22 Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 0
Query: 178 LNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFA-DEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHRI-EETANVFSVDISSTSKFIVSASGEEFAKLWNLKTGTLLSTLHDHDHRSDKNFCVA 344
+ LQ L ++VVS V YSW+G+ +A G+ +VFDA SG+ LF FA +++ P H YVRS+CFSPDG+ LVTGS+ VW++ S L H + +V VD+S+ ++FI SAS + LW+L +GT L TL + +D VA
Sbjct: 6 VQLQHGLAFDTVVSSVCYSWDGKYVALGTCNSAHVFDAASGRRLFRFATNKERSAPQHEH---------------FYVRSLCFSPDGQQLVTGSEGQSFKVWNLHSCTLQHSLLGHGMDVHCVDVSADNRFIASASTLNYVMLWDLHSGTRLQTLTNKYGPTDSVSSVA 159
BLAST of Gcaud2535.t1 vs. uniprot
Match: A0A7S0BGJ5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGJ5_9RHOD) HSP 1 Score: 105 bits (261), Expect = 1.580e-21 Identity = 53/126 (42.06%), Postives = 80/126 (63.49%), Query Frame = 0
Query: 177 NLNLQQTLPHESVVSCVRYSWNGEQLATGSRRCTNVFDANSGQHLFAFADEDSPRPMRNHGPQSSSNAEDNNNGGEYVRSVCFSPDGKLLVTGSDDHVLHVWDMQSRRLNHRIE-ETANVFSVDIS 301
N+ LQ + H+SVV CVRYS++G+ LATGS +C +FDA +G + FA ++ Q S + +DN Y R+VCFSPDGK L+TGS+D ++ VWD+++R + H + +++SVD S
Sbjct: 137 NVKLQNSFVHDSVVCCVRYSYSGQYLATGSNKCAQIFDAATGAKIATFARDEVADQ------QYSDSQQDN-----YFRAVCFSPDGKWLITGSEDRLVRVWDVRTRTVKHELTGHETDIYSVDAS 251 The following BLAST results are available for this feature:
BLAST of Gcaud2535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2535.t1 ID=Gcaud2535.t1|Name=Gcaud2535.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=344bpback to top |