mRNA_F-serratus_M_contig1178.1432.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.370e-75 Identity = 143/369 (38.75%), Postives = 212/369 (57.45%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
K++YGL QA R W+ L + A+ FEQ AD CVFR + DG +++VVHVDDI A + + D+F ADL +KN+ + + GC N + L + Q + + + + V R + MS+ LS D E +FP+RE VG++MW AT TR DIA AVRAVAR+C + H A M IL Y T +GI++ E ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T++AEYVAL +V+KE++FL+Q+ FM P + + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ + +++SV +V S Q AD TK L F H F+
Sbjct: 97 KSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERC-DKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGG-RSVPMSSGVKLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFV 458
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.880e-75 Identity = 146/386 (37.82%), Postives = 220/386 (56.99%), Query Frame = 1
Query: 136 KVPGAVGRL--------KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
++P GRL K++YGL QA R W++ L + + F Q AD CVFR + +G + +VVHVDDI + + + D+F DL +KN+ ++ + GC + LK+ Q Y E + F V+ I + LS+ D + EE+ +P+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHAD TK L F H ++
Sbjct: 56 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYV 434
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 249 bits (637), Expect = 3.530e-73 Identity = 146/386 (37.82%), Postives = 220/386 (56.99%), Query Frame = 1
Query: 136 KVPGAVGRL--------KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
++P GRL K++YGL QA R W++ L + + F Q AD CVFR + +G + +VVHVDDI + + + D+F DL +KN+ ++ + GC + LK+ Q Y E + F V+ I + LS+ D + EE+ +P+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHAD TK L F H ++
Sbjct: 230 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYV 608
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.780e-71 Identity = 131/369 (35.50%), Postives = 212/369 (57.45%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
K++YGL QA R+W+ L + + F Q AD CVFR + +G M++VVHVDDI A + + D+F DL +KN+ + + C +++ L++ Q + E + + ++ R + + L+ D + E P+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D + RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV FM P + + VFEDN+G++++ N + +KHIDV+H+ +R+ + +++S+ +V ++ QHAD TK + + F H F+
Sbjct: 11 KSLYGLKQASRHWHAHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWG-RSVPLPVSVKLTDFD-----ENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFV 372
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 239 bits (609), Expect = 7.070e-71 Identity = 135/386 (34.97%), Postives = 218/386 (56.48%), Query Frame = 1
Query: 136 KVPGAVGRL--------KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
++P GRL K++YGL QA R+W++ L + + F Q AD CVFR + +G M++VVHVDDI A + + D+F DL +KN+ + + C +++ L++ Q + E + + ++ R + + L+ D + E P+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D + RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV FM P + + VFEDN+G++++A N + +KHIDV+H+ +R+ + +++S+ +V + QHAD TK + + H F+
Sbjct: 56 RLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWG-RSVPLPVSVKLTDFD-----ENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFV 434
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.800e-70 Identity = 143/369 (38.75%), Postives = 212/369 (57.45%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
K++YGL QA R W+ L + A+ FEQ AD CVFR + DG +++VVHVDDI A + + D+F ADL +KN+ + + GC N + L + Q + + + + V R + MS+ LS D E +FP+RE VG++MW AT TR DIA AVRAVAR+C + H A M IL Y T +GI++ E ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T++AEYVAL +V+KE++FL+Q+ FM P + + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ + +++SV +V S Q AD TK L F H F+
Sbjct: 1433 KSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERC-DKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGG-RSVPMSSGVKLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFV 1794
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 250 bits (639), Expect = 3.730e-70 Identity = 142/369 (38.48%), Postives = 211/369 (57.18%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
K++YGL QA R W+ L + A+ FEQ AD CVFR + DG +++VVHVDDI A + + D+F ADL +KN+ + + GC N + L + Q + + + + V R + MS+ LS D E FP+RE VG++MW AT TR DIA AVRAVAR+C + H A M IL Y T +GI++ E ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T++AEYVAL +V+KE++FL+Q+ FM P + + + +FEDN+G+++LA N ++ +KHIDV+H+ +R+ + +++SV +V S Q AD TK L F H F+
Sbjct: 927 KSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERC-DKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGG-RSVPMSSGVKLSDFD-----ADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFV 1288
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.330e-69 Identity = 145/386 (37.56%), Postives = 220/386 (56.99%), Query Frame = 1
Query: 136 KVPGAVGRL--------KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKHAKFI 1266
++P GRL K++YGL QA R W++ L + + F Q AD CVFR + +G + +VVHVDDI + + + D+F DL +KN+ ++ + GC + LK+ Q Y E + F V+ I + LS+ D + EE+ +P+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHA+ TK L F H ++
Sbjct: 751 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD-----QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYV 1129
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 248 bits (633), Expect = 3.260e-69 Identity = 142/365 (38.90%), Postives = 210/365 (57.53%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKH 1254
K++YGL QA R W+ L + A+ FEQ AD CVFR + DG +++VVHVDDI A + + D+F ADL +KN+ + + GC N + L + Q + + + + V R + MS+ LS D E +FP+RE VG++MW AT TR DIA AVRAVAR+C + H A M IL Y T +GI++ E ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T++AEYVAL +V+KE++FL+Q+ FM P + + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ + +++SV +V S Q AD TK L F H
Sbjct: 1219 KSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERC-DKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGG-RSVPMSSGVKLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1576
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE) HSP 1 Score: 248 bits (633), Expect = 3.510e-69 Identity = 142/365 (38.90%), Postives = 210/365 (57.53%), Query Frame = 1
Query: 163 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD*PRNPKKEEMRKFPYREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKFYKH 1254
K++YGL QA R W+ L + A+ FEQ AD CVFR + DG +++VVHVDDI A + + D+F ADL +KN+ + + GC N + L + Q + + + + V R + MS+ LS D E +FP+RE VG++MW AT TR DIA AVRAVAR+C + H A M IL Y T +GI++ E ++ Y D+D + RRSVSG ++ GA+SW SR Q+ T++AEYVAL +V+KE++FL+Q+ FM P + + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ + +++SV +V S Q AD TK L F H
Sbjct: 1287 KSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERC-DKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGG-RSVPMSSGVKLSDFD-----ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1644 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1178.1432.1 >prot_F-serratus_M_contig1178.1432.1 ID=prot_F-serratus_M_contig1178.1432.1|Name=mRNA_F-serratus_M_contig1178.1432.1|organism=Fucus serratus male|type=polypeptide|length=182bp MLYQRKFGQGGKVEKYKYRLVAQGFWQVEGVHYTEKVPGAVGRLKAIYGLback to top mRNA from alignment at F-serratus_M_contig1178:102805..104225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1178.1432.1 ID=mRNA_F-serratus_M_contig1178.1432.1|Name=mRNA_F-serratus_M_contig1178.1432.1|organism=Fucus serratus male|type=mRNA|length=1421bp|location=Sequence derived from alignment at F-serratus_M_contig1178:102805..104225- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1178:102805..104225- >mRNA_F-serratus_M_contig1178.1432.1 ID=mRNA_F-serratus_M_contig1178.1432.1|Name=mRNA_F-serratus_M_contig1178.1432.1|organism=Fucus serratus male|type=CDS|length=1092bp|location=Sequence derived from alignment at F-serratus_M_contig1178:102805..104225- (Fucus serratus male)back to top |