prot_F-serratus_M_contig1178.1432.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1178.1432.1
Unique Nameprot_F-serratus_M_contig1178.1432.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length182
Homology
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.450e-21
Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FE  KADPCVFRK++DG   M+VV++VDDIL     +   +   A L  KF  KN+    +  GC I  + +   L++    Y++SMVKRFDV+ A+RI A   V    K D
Sbjct:   19 RAIYGLKQSGRQWGYHAADTLVENGFEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRD 154          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5KL99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL99_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.490e-21
Identity = 55/137 (40.15%), Postives = 76/137 (55.47%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN+    +C GC I  +++   LK+ Q  Y++SMVK FDV+  +RI A   V    K D
Sbjct:  865 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECHWCDGCAIERDVEAGTLKISQTAYIDSMVKPFDVQSTSRIPASPGVDLGPKRD 1000          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 4.870e-21
Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN++   +  GC I  +++   L++ Q  Y++SMVKRFDV+  +RI A   V    K D
Sbjct:  437 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRD 572          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 7.080e-21
Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D  A M++V++VDDIL     +   +   A L  KF  KN+    +  GC I  ++K   L++ Q  Y+ SMVKRFDV+  +RI A   V  + K +
Sbjct:  912 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVAVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKRE 1047          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.260e-20
Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  +N+    +  GC I  +++   LK+ Q  Y++SMVKRFDV+  +RI A   V    K D
Sbjct:  613 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRD 748          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.500e-20
Identity = 66/180 (36.67%), Postives = 93/180 (51.67%), Query Frame = 0
Query:    6 KFGQGGKVEKYKYRLVAQGFWQVEGVHYTEKV-PG----------AVGRLKAI----YGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILA 170
            K  + GKVE +K RLVA+GF Q+  V Y     PG          AV   K I    + + QA   W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN+    +  GC I  +++   L++ Q  Y++SMV+RFDV+  +RI A
Sbjct:   54 KTNKEGKVENFKARLVARGFSQIPNVDYFHSSSPGPSSASIKLMLAVADEKGINLNHWDVKQA--QWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIPA 230          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 4.280e-20
Identity = 54/137 (39.42%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILAMSAVPTLSKAD 181
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V+HVDDIL     +   +   A    +F  KN+    +  GC I  ++    LK+ Q  Y++SMVKRFDV+  +RI A   V    K D
Sbjct:  453 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDC-EELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRD 588          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.110e-20
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILA 170
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN+    +  GC I  +++   L++ Q  Y++SMV+RFDVK  +RI A
Sbjct:  883 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA 1007          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.120e-20
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILA 170
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN+    +  GC I  +++   L++ Q  Y++SMV+RFDVK  +RI A
Sbjct:  992 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA 1116          
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.260e-20
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   45 KAIYGLVQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDILAHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQHLYVESMVKRFDVKKATRILA 170
            +AIYGL Q+ R W       +    FEQ KADPCVFRK++D    M++V++VDDIL     +   +   A L  KF  KN+    +  GC I  +++   L++ Q  Y++SMV+RFDVK  +RI A
Sbjct: 1262 RAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA 1386          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1178.1432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L663_9PHAE1.450e-2140.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL99_9PHAE1.490e-2140.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC10_9PHAE4.870e-2139.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L060_9PHAE7.080e-2140.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBN2_9PHAE1.260e-2039.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE2.500e-2036.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1V1_9PHAE4.280e-2039.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE6.110e-2040.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE6.120e-2040.48Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.260e-2040.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..181
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 9..165
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 45..166
e-value: 9.7E-18
score: 64.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1178contigF-serratus_M_contig1178:103495..104195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1178.1432.1mRNA_F-serratus_M_contig1178.1432.1Fucus serratus malemRNAF-serratus_M_contig1178 102805..104225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1178.1432.1 ID=prot_F-serratus_M_contig1178.1432.1|Name=mRNA_F-serratus_M_contig1178.1432.1|organism=Fucus serratus male|type=polypeptide|length=182bp
MLYQRKFGQGGKVEKYKYRLVAQGFWQVEGVHYTEKVPGAVGRLKAIYGL
VQAWRYWNNKLCADMTAIRFEQEKADPCVFRKVIDGEAEMVVVVHVDDIL
AHAKHQAAMDRFAADLGHKFKLKNMDNVGYCMGCHITWNLKVRELKLDQH
LYVESMVKRFDVKKATRILAMSAVPTLSKAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2