mRNA_F-serratus_M_contig8527.19917.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8527.19917.1
Unique NamemRNA_F-serratus_M_contig8527.19917.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 1.640e-65
Identity = 148/309 (47.90%), Postives = 186/309 (60.19%), Query Frame = 1
Query:    1 QGYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQ--KPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERV-RLHPSMWVPAYAPKP---------RSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQPSWS*IPVTRHSWRSREQARREG---VKVTWERRLAMAA--KGAGEGRR*SF 876
            +GYRGV+ATKDI     LVRIARSCC+GPET D S   W +AM+++ V    +  G+  KP  P LTRAC TVLRLLHERGLG++SPF +YLSVLP DHRLP+EW E+EV LL+GTSAEPLV A SLDSQFEAF+ V   HP++W P+   K          RS RG T  G  H  +   A    +     S  I T           +++     P + G  VFSSFG++SNAQLLNSYGFVL GN FD+V         +  T ++   + +A + G    K TWE+RLAM A  + A EG + +F
Sbjct:   65 EGYRGVVATKDIPRDAVLVRIARSCCLGPETTDESKNSWTKAMSTSAVDATKTTQGESSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGVNWVRS-RGFTVMGDPH--MIPGADMFNHDPNKQSVQIGTDGEEHF-----VMKTVQ--PVKAGEEVFSSFGHISNAQLLNSYGFVLPGNSFDTVLIPTQL---VVNTCYATFVKLEADKLGEAETKKTWEQRLAMVASNRDADEGEQEAF 360          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.430e-45
Identity = 121/310 (39.03%), Postives = 164/310 (52.90%), Query Frame = 1
Query:    1 QGYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGV-----------VGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER-VRLHPSMWVP------AYAPKPRSLR--GLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQPSWS*IPVTRHSWRSREQARREG-----------VKVTWERRLAM 837
            +GYRGV+A  DI  G  L+RI+R CCIGP T DAS+ +WR AM  AG+                          LT ACFTVLRLLHE G G  + FS YLS+LP DHR+P+EWN  E  LL+GT+AEPLV + +L+ Q+  FE  V+ HP +W        A+A     +R  G T  G  +  +   A    +     S     +S    + +  ++R     P+  G+ VFSSFG ++NAQL+NSYGFVL  NPFDSV    P+   I   R ++ + E++  EG           V+  W++RL M
Sbjct:   44 EGYRGVVAKDDIPEGTELLRISRECCIGPATDDASAEQWRRAMGQAGIGNXXXXXXXXXXXXXXXXXXXXXXXKLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWAKEVCSSAAFAKAVNWVRSRGFTVHGEPY--MIPCADMFNHNPSDQSAMFGQASEDSADVF--VMRAVKSIPK--GSEVFSSFGQIANAQLVNSYGFVLPQNPFDSVLV--PAKLVIDACRAAFANLERSGEEGGEXXXXXXXXXVERAWQKRLDM 345          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: K3WGB2_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGB2_GLOUD)

HSP 1 Score: 65.5 bits (158), Expect = 6.430e-8
Identity = 53/179 (29.61%), Postives = 78/179 (43.58%), Query Frame = 1
Query:  190 LTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFE--RVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL 699
            L+     V+ LL+E GLG+ S F+ Y++ LP    LPM W+      LK T+A P V    + + F +F        PS+W    A  P   +         A     A      EP     I  ++ +  N   ++++ + GA +       E G  V  S+G LSNA+ L  YGFVL
Sbjct:   98 LSPTVLLVMALLYEHGLGEKSRFAGYIAQLPKQIPLPMTWDAKARRALKHTAAAPSVDQELVANMFTSFAVPLATKFPSIWPENVAKDPAHFQWAYTVVSSRAFTIADAT-----EPTLLPVIDMANHAHTNPCAKIVKTDAGAFQLVALRQIEKGEAVTISYGELSNAEFLCRYGFVL 271          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A5J4YBZ4_9CHLO (SET domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBZ4_9CHLO)

HSP 1 Score: 65.5 bits (158), Expect = 7.250e-8
Identity = 64/260 (24.62%), Postives = 113/260 (43.46%), Query Frame = 1
Query:    4 GYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAE---------------PLVSAAS--LDSQFEAFERVRLHPSM------------WVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFV 696
            G RGV+A +DI  G  L+ I  SCC+   T      +   +++ AG   +A+    K   P ++    TVL LL+E G G  S FSA+L  LP +H   + W++ ++  L+GT+ E               P++  A+    ++ + +E   L+  +            W+   A +   L  L    M +   +    +   R+     T+     +   +    ++ E    +  G  +  ++G+LS+AQLL +YGFV
Sbjct:   29 GDRGVVAEEDIKEGQQLMLIPMSCCLHMPT------QQEYSLSQAGY--SAAVKHLKEKHPGISPFLATVLLLLYEMGQGSKSKFSAFLQTLPQEHDCVLCWSKGQLSELQGTAIEIAGDSTRTVFEREVLPIMQQATDIWSAEVQTYEAFELYAGLVQSRAFHMLQENWITGSAQEGVELYMLPAIDMINHSTQPDKRNTLLRKSNAEHTVKVDGEAMTIQGFFTMKAERDIAK--GEQLLHTYGDLSDAQLLQTYGFV 278          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A3F2RVL3_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVL3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.340e-7
Identity = 55/188 (29.26%), Postives = 87/188 (46.28%), Query Frame = 1
Query:  208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERV--RLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSVCSSQP 738
            T + LL E   G+ S FS Y+  LP D  LP+ WN    E+LK T+A P++    +   + ++     +  P++W       P  +  L      ++ +   A  I   +EP     I  ++ +  N    ++R +DG+ +       E    V  S+G+LSNAQLL  YGFVL T    DS+  + P
Sbjct:   91 TTMALLAEYTRGEKSDFSGYIQQLPTDISLPLTWNAKHREMLKHTTAFPIIDDKLVLKMYSSYAEPLEKSFPTIW-------PSEVSTLERFMWAYSVVSSRAFKIVGEQEPTLLPVIDMANHAVENPAAHIVRADDGSFQLTTLRKVEKNEPVTISYGDLSNAQLLCRYGFVLSTRASSDSILITSP 271          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A8K1C4W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4W9_PYTOL)

HSP 1 Score: 62.4 bits (150), Expect = 6.110e-7
Identity = 60/183 (32.79%), Postives = 81/183 (44.26%), Query Frame = 1
Query:  208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAF--ERVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YR-EPICSTTIPTSSRSRLNRWRRLLRNEDG-----APRE--GGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
            TVL LL+E+  G+AS F  YL  LP    +PM W      LLK T+A P+V    + S F+ +          +W       P S+  LT     ++ +   A  I  R EP     I  ++    +    + R  +G     A R       V  S+G LSNAQLL  YGFVL T  P DS+
Sbjct:   95 TVLALLNEKSKGEASAFHGYLQQLPSRVAVPMTWTAESRALLKDTAASPIVDFELVQSLFQRYLSPLAASFSELW-------PASVASLTEFIWAYSVISSRAFAINDRQEPTLLPVIDMANHDPTDSNAIIQRTPEGNYTLSATRAIASDEAVTISYGELSNAQLLCRYGFVLPTTVPTDSI 270          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: V9FCG7_PHYPR (SET domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FCG7_PHYPR)

HSP 1 Score: 60.1 bits (144), Expect = 3.220e-6
Identity = 54/183 (29.51%), Postives = 81/183 (44.26%), Query Frame = 1
Query:  208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER--VRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YR-EPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
            T L L  E   G  S F  Y+  LP    LP  W+E   E+LK T+A P++    +   +E +     +  P++W       P  +  L      ++ +   A  +    EP     I  ++ S  N    +++ + G+ +       E G  V  S+GNLSNAQLL  YGFVL T  P DS+
Sbjct:   90 TTLALWAELARGDKSDFHGYIQQLPTTISLPFSWDEKHREMLKNTTAFPILDDKLVLKLYEDYAAPLTKEFPAIW-------PTEVSTLKKFQWAYSMVSSRAFKVADAPEPTLLPVIDMANHSAENPAAHIVKTDSGSFQLVALRKVENGEPVTISYGNLSNAQLLCRYGFVLPTLVPSDSI 265          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A7R9VAF8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VAF8_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 6.280e-6
Identity = 80/301 (26.58%), Postives = 122/301 (40.53%), Query Frame = 1
Query:    4 GYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQF-EAFERVRLHPSMWVPAYAPK-----PRSLRGLTG*G--------MEHACLRHS-AIHI*YR-------------------EPICSTTIPTSSRSRLNRWRRLLRNE-DG------------APREGGAG--VFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQ-----PSW 744
            G RGV+A  DIA G  LV +   CC+     ++   +     A   V          P   P   +   VL ++ E   G+ SPFS YL+ LP D    + W+++E + LKGT+ +     ++ ++   E   RV   P +W PA A       P   +   G G        +  A L  S A H+  +                   + I  +T P    + L+++   +  E DG            A R+  AG  V  ++G+LS+AQL+ +YGFV  G   D   S +     PSW
Sbjct:   53 GDRGVVARADIAKGENLVIVPTDCCMHLPADESDLSDPAPRAARHLVT-------SSPRPSPFLGS---VLMVMSELAAGRDSPFSDYLAALPDDVNCVLGWSQAEKDELKGTTIDDSTQRSAGEAYASEVAPRVAARPDLWPPAAAASAERAAPAGTKTAGGSGGLDGLREFLRVASLVQSRAFHMEAQNWITGVREEGTELFLIPAIDMINHSTDPARRNTSLHKFDVRMEVEVDGRNVVFDAFFAMKADRDIRAGEQVLHTYGDLSDAQLVQTYGFVDLGPGGDPGMSDRCVGIMPSW 343          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: H3GBJ5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBJ5_PHYRM)

HSP 1 Score: 58.2 bits (139), Expect = 2.300e-5
Identity = 52/183 (28.42%), Postives = 85/183 (46.45%), Query Frame = 1
Query:  208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER--VRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGA-------PREGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
            T L LL E   G+ S F  Y+  LP    LP  W+++  E+L+ T+A P++    + S + ++    ++  P++W       P  +  L      ++ +   A  +   +EP     I  ++ +  +    ++  E G+         E G  V  S+GNLSNAQLL  YGFVL T  P DS+
Sbjct: 1345 TTLALLAELARGEKSDFHGYIQQLPTAISLPFTWDKTLREMLRHTTAFPILDDKLVLSMYTSYAAPLMKEFPAIW-------PSEVSALEKFQWAYSIVSSRAFTVADVQEPTLLPVIDMANHTAEDPVAHIVETEAGSFQLTALRKAEKGEPVTISYGNLSNAQLLCRYGFVLPTLAPSDSI 1520          
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A5D6XTL9_9STRA (SET domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTL9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.540e-5
Identity = 72/258 (27.91%), Postives = 106/258 (41.09%), Query Frame = 1
Query:   10 RGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAM-------ASAGVVGAASADGQKPMGP----PLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVC 726
            R ++A   I A  TL+ ++    +         G W   +       + AG V  ++A+ Q+  G      L+     VL LLHER   + S F  Y++ LP    LPM W+      LK T+A        L  +F A    R  P++W       P     LT     +A +   A  I    EP     I  ++ +  N    ++R +DG+ +         G  V  S+G+LSNA+LL  YGFVL   P  S C
Sbjct:   43 RSIVARDAIPAAQTLITLSSGAFVA-------GGAWLHGLETLQRKESEAGAVRFSAAELQELRGELQRLQLSPTLQLVLALLHERARRQQSRFDGYIAQLPAHVSLPMNWSVHGRRQLKRTAA--------LFERF-AVPLARRFPALW-------PADETTLTDFQWAYAVVSSRAFTISGASEPALLPVIDMANHASENPAATIVRADDGSFQLVTLRAVAKGEAVTISYGDLSNAELLCRYGFVLP-EPVPSDC 276          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FPV0_ECTSI1.640e-6547.90SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C8N7_9STRA1.430e-4539.03SET domain-containing protein n=1 Tax=Tribonema mi... [more]
K3WGB2_GLOUD6.430e-829.61SET domain-containing protein n=1 Tax=Globisporang... [more]
A0A5J4YBZ4_9CHLO7.250e-824.62SET domain-containing protein n=1 Tax=Trebouxia sp... [more]
A0A3F2RVL3_9STRA3.340e-729.26SET domain-containing protein n=3 Tax=Phytophthora... [more]
A0A8K1C4W9_PYTOL6.110e-732.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
V9FCG7_PHYPR3.220e-629.51SET domain-containing protein n=9 Tax=Phytophthora... [more]
A0A7R9VAF8_9CHLO6.280e-626.58Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
H3GBJ5_PHYRM2.300e-528.42Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6XTL9_9STRA3.540e-527.91SET domain-containing protein n=1 Tax=Pythium bras... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8527contigF-serratus_M_contig8527:2162..6029 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue2.7e-42
Seed eggNOG ortholog2880.D7FPV0
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-lysine monomethylation
EggNOG OGsKOG1337@1,KOG1337@2759
EC2.1.1.43
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons9
Model size1205
Cds size459
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932509.244627-UTR-F-serratus_M_contig8527:2161..21791622932509.244627-UTR-F-serratus_M_contig8527:2161..2179Fucus serratus maleUTRF-serratus_M_contig8527 2162..2179 +
1690964343.1274383-UTR-F-serratus_M_contig8527:2161..21791690964343.1274383-UTR-F-serratus_M_contig8527:2161..2179Fucus serratus maleUTRF-serratus_M_contig8527 2162..2179 +
1622932509.3765342-UTR-F-serratus_M_contig8527:3535..35511622932509.3765342-UTR-F-serratus_M_contig8527:3535..3551Fucus serratus maleUTRF-serratus_M_contig8527 3536..3551 +
1690964343.1873932-UTR-F-serratus_M_contig8527:3535..35511690964343.1873932-UTR-F-serratus_M_contig8527:3535..3551Fucus serratus maleUTRF-serratus_M_contig8527 3536..3551 +
1622932509.39626-UTR-F-serratus_M_contig8527:3931..40481622932509.39626-UTR-F-serratus_M_contig8527:3931..4048Fucus serratus maleUTRF-serratus_M_contig8527 3932..4048 +
1690964343.1973114-UTR-F-serratus_M_contig8527:3931..40481690964343.1973114-UTR-F-serratus_M_contig8527:3931..4048Fucus serratus maleUTRF-serratus_M_contig8527 3932..4048 +
1622932509.4120228-UTR-F-serratus_M_contig8527:4431..45251622932509.4120228-UTR-F-serratus_M_contig8527:4431..4525Fucus serratus maleUTRF-serratus_M_contig8527 4432..4525 +
1690964343.209082-UTR-F-serratus_M_contig8527:4431..45251690964343.209082-UTR-F-serratus_M_contig8527:4431..4525Fucus serratus maleUTRF-serratus_M_contig8527 4432..4525 +
1622932509.434-UTR-F-serratus_M_contig8527:4942..51661622932509.434-UTR-F-serratus_M_contig8527:4942..5166Fucus serratus maleUTRF-serratus_M_contig8527 4943..5166 +
1690964343.2225194-UTR-F-serratus_M_contig8527:4942..51661690964343.2225194-UTR-F-serratus_M_contig8527:4942..5166Fucus serratus maleUTRF-serratus_M_contig8527 4943..5166 +
1622932509.4605799-UTR-F-serratus_M_contig8527:5392..55011622932509.4605799-UTR-F-serratus_M_contig8527:5392..5501Fucus serratus maleUTRF-serratus_M_contig8527 5393..5501 +
1690964343.2353702-UTR-F-serratus_M_contig8527:5392..55011690964343.2353702-UTR-F-serratus_M_contig8527:5392..5501Fucus serratus maleUTRF-serratus_M_contig8527 5393..5501 +
1622932509.4944432-UTR-F-serratus_M_contig8527:5517..56321622932509.4944432-UTR-F-serratus_M_contig8527:5517..5632Fucus serratus maleUTRF-serratus_M_contig8527 5518..5632 +
1690964343.244621-UTR-F-serratus_M_contig8527:5517..56321690964343.244621-UTR-F-serratus_M_contig8527:5517..5632Fucus serratus maleUTRF-serratus_M_contig8527 5518..5632 +
1622932509.5336888-UTR-F-serratus_M_contig8527:5976..60291622932509.5336888-UTR-F-serratus_M_contig8527:5976..6029Fucus serratus maleUTRF-serratus_M_contig8527 5977..6029 +
1690964343.260594-UTR-F-serratus_M_contig8527:5976..60291690964343.260594-UTR-F-serratus_M_contig8527:5976..6029Fucus serratus maleUTRF-serratus_M_contig8527 5977..6029 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932509.2673566-CDS-F-serratus_M_contig8527:2179..23221622932509.2673566-CDS-F-serratus_M_contig8527:2179..2322Fucus serratus maleCDSF-serratus_M_contig8527 2180..2322 +
1690964343.1405826-CDS-F-serratus_M_contig8527:2179..23221690964343.1405826-CDS-F-serratus_M_contig8527:2179..2322Fucus serratus maleCDSF-serratus_M_contig8527 2180..2322 +
1622932509.3251784-CDS-F-serratus_M_contig8527:2874..30491622932509.3251784-CDS-F-serratus_M_contig8527:2874..3049Fucus serratus maleCDSF-serratus_M_contig8527 2875..3049 +
1690964343.152586-CDS-F-serratus_M_contig8527:2874..30491690964343.152586-CDS-F-serratus_M_contig8527:2874..3049Fucus serratus maleCDSF-serratus_M_contig8527 2875..3049 +
1622932509.355925-CDS-F-serratus_M_contig8527:3394..35351622932509.355925-CDS-F-serratus_M_contig8527:3394..3535Fucus serratus maleCDSF-serratus_M_contig8527 3395..3535 +
1690964343.1771781-CDS-F-serratus_M_contig8527:3394..35351690964343.1771781-CDS-F-serratus_M_contig8527:3394..3535Fucus serratus maleCDSF-serratus_M_contig8527 3395..3535 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8527.19917.1prot_F-serratus_M_contig8527.19917.1Fucus serratus malepolypeptideF-serratus_M_contig8527 2180..3535 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8527.19917.1

>prot_F-serratus_M_contig8527.19917.1 ID=prot_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=polypeptide|length=153bp
MATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADG
QKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNES
EVELLKGTSAEPLVSAASLDSQFEAFERVRLHPSMWVPAYAPKPRSLRGL
TG*
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mRNA from alignment at F-serratus_M_contig8527:2162..6029+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8527.19917.1 ID=mRNA_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=mRNA|length=3868bp|location=Sequence derived from alignment at F-serratus_M_contig8527:2162..6029+ (Fucus serratus male)
CAGGGTTACCGGGGCGTGATGGCTACCAAGGACATCGCCGCCGGAGTCAC GCTGGTGCGAATCGCTCGTAGCTGCTGCATCGGCCCTGAGACGGCGGACG CATCGTCGGGCGAGTGGCGCGAGGCAATGGCCTCCGCCGGCGTCGTCGGC GCCGCATCTGCGTGAGACTATTCTCTAAGTAACACCAGTGCAGTATCCGT CGCTGCTCTGACTGCTCCAGGGTTGCTTTGATCACCAGCGTGTCGCTCGG TTTATATAAAACTTGTACGTCAGCAAATTGGATCACCGGCCCTACCGTTC CCCCGTTTTTTTTTCTTCATTTTCTCGCCGAGCCCTGAGGAAGTTCACAA GGATGTATTCATTGTTAATTGTGATGTATTCATAGTGCCAAGTAGAGCTT TAGAGCTTTATACCAGTAAGTACATGTATTGTTTAAAATAGTTGTATTAC TGTGGTAGTTAAAGAGATCAAGGCAAAGACCAGccccccCCCCCCGGGCT ACTGCACACTCGTACACAATACACATCCCCTGAGTCAGGTGTTGCTATCG CCGGGGTGTGAAGTCTACCTTGTTTCGTATTCTAGTGCGTCACCTACAGT TCGTTGGACGTAGCATTGGTCGTGCATTCGTGCCCGCGCATGACTCAAAA ACGGAGAAACGGTTGTAGAATGTCGAATGACGAAGGACGAAGGACGTTTC TCAAACCTGGCAGGGATGGGCAGAAGCCGATGGGCCCACCGTTGACACGA GCGTGTTTCACCGTGCTGCGCCTGCTGCACGAACGAGGGCTTGGGAAGGC GTCTCCCTTCTCTGCCTACCTCAGCGTCCTCCCGTTGGACCACCGCTTGC CGATGGAGTGGAACGAGTCTGAGGTTGAGCTGCTTAAGGTACGGTAAGAA TTGTGACATGCTCCTCCAGACGTTGGGCCGCGCCGGCAGACGTGCTTCCA GGAATCTCGCGATGCATCGGAACGCCGTGCGGCTTTTATTACTATTAATA GGAGTTCCAAAAGCATGGGAAATAATTGGAACCGTCTCGGTTGTCTCCTG TATCTCCGTTCTGCCTCGATTGCTTGATCCGCGCCTTATGAGAAAGGCAA GCAAGATTGTTGGCTCCTCATATTTTCCAAGTAAGCTCGAGGGTCACACT TGATCTTGACGCTCGTAGTCTTGAACCCCGCCCCACCAAGCCTGCAAGTC AGCAGCGCAACTGTTTTTCTTCGGTCACCCCAGGGTACTTCGGCGGAACC GCTGGTGAGCGCAGCAAGCCTGGACAGCCAATTCGAAGCTTTCGAGCGGG TGCGTCTGCACCCGAGCATGTGGGTCCCAGCGTATGCTCCAAAACCGCGT TCGCTAAGGGGGTTAACTGGGTGAGGGATGGAGCATGCTTGTTGCGTTGT CTTTCGATCATTTGACGAACCCTGAGTGTCATCTTGTGTGGAGGAAATTT TGGCCACGCAACTTTTTGAAATATGCGTTTCCCCCAAATCGGCCGTACCG CGTATCGTGCTCAGTTTCGTCCCGGTTCCGGTCCCGGCCCATTCAGCGGC GGGGGAAGAGTTGAAACCAGACCCATCGATTGATCGATCGGCTTTGAAGT CGTTCGGGTGAAACGTGGTTTGCTCCTCTGGCTCCGCCGAGACTTTTGCC TGCCCTCGTGATACCTAACCCCTCCATCCGCCGCTGATGATTCCCGACTG TGTATCTTGAGTTATTCATTGTTCGTGTACTCCGACTCGTCGTGCCTTTT CCAAAAGGTGCGCTCGCGAGGTTTACGGCATTCGGCGATCCACATATGAT ACCGGGAGCCGATATGTTCAACCACGATCCCAACAAGCAGTCGGTCCAGA TTGAACCGATGGCGACGACTACTTCGTAATGAAGACGGTAACGATGTCAC CCGTCTCGCTCGTATAGTCTATGATAGCCGTTCAATGAGGGTGGGGGACG CCTCATCCTGTACCGTTTCCTTCCCACATGAACCCGCCTGCCTTCAGCCG GTATACCAGTATTCAACAGAGCCGTATAACCCGTGGTTATTGCCGTTTAA CCCGTAGTTACTGCCGTATCTTTTGTCTTCCTTGTCTCCATGCCTTCATC TATCTACCTGGTATGAAATAGCACTAAACACGGGTTTCGAGATCCAACAT TACACCCAGCTTTGACGTGCTTTGCTTATGTCGCAAGCTACCGGAACTGC TGAACGATTACGTAGCGCACTGGTAGAGTATTCCGGGCGAGAAGTAAAAC TTATCGGGTTGGTTCGGCAGGTGCACCCCGTGAAGGCGGGGCAGGAGTGT TCAGCAGCTTCGGCAATCTGTCGAACGCCCAACTGCTCAACTCTTACGGC TTTGTTCTGACGGGGTGAGGGAAAGGAAGGGAAAGAAACGTGACGCCTTA TGAGTGTCTTTTTGACCTTATTGTTTTACGAGGCTTGGTCGATGGATATG GCACTTTTCGAATGCTGAAACGTTGCCCCGAGCAAGACTGTGATGCGCTG CTGTAGGTAGGGTGTGTCTCGTACTCATTGAGCTCATCGGGGTGAAACTG ATTCCGTTTTTCTTCCATGAAATGTACTAAAGGGCAGAACGAGGTTCGGT TGTGGTCGAGACGCGGTCTGCGGGTTCATGTTGATATACCGTGTGTTGTG TACTCTGAGATAGCGGCCAGTCCTTCAAAGACCCCCTTGCCCCCCCCCCC TCACCTTATTTAAAACTAAACTACAAAAACTAGAACATACATTTCATTCG TTATCTCGTTTGTTACGTACATGCTCCGCAGAAACCCATTCGACAGCGTG TGCTCATCCCAACCGAGCTGGTCGTGAATACCTGTCACGCGACATTCTTG GAGATCGAGGGAACAAGCTCGGAGAGAAGGTGTGAAGGTGACCTGGGAGC GACGACTTGCGATGGCGGCAAAGGGTGCAGGAGAGGGGAGGAGATGAAGC TTTCGTCATCGCCAAGTACGACCTGGTGCCGGAAAATCTGCTGGACACGG TTCAGGTAGGCCCAGCTGTTCGAAAAAGCAGGGGTACAGAACACGGGGGC ACATCACTACGCTCTTGGTAAAAGGGCAGCGGCCGCTCCAAGTGGTAGCA TAGAGCGAGAAAAACGTTGTTCTCCCCCTTTGTTGTTGTTGTTCAGAAGG CACAAACCGTCCCCTCTCTCCTCGCCTGTTTGTTTTCTTCCGCTGTCTTG CCTCGGCCAATGCTGACTGACACTCTGATAGCTTCTGATCATGTCCAATG ATGAGGAAGTGGCATATGCAGCGATCGCTGCCGTCGCCCAAGCAAGAAGA TAGACAGTACAGCCCGACCCTGAATAGGGGCAAGCGTGGCGTTTAGCATC AACAAGGCGGAGAGATCCGCCAGACCATCGGAGCAGACGCAAAGGGCCGT GGCAGAGATGCTCGTGGCTGAAGAGAAAGCAGTTCTGGTTGACTTGAAGC TACAGCTCATGGGCGCGGTGAGTTCAAGTCGACGGATGGAAACTAACATC GTCTCTCAAGACCCGGAGCGGTCTACTGTTCTCTTTTGACCGTGTGATGA TTCAAAAGCAAGACTGTCCTTAGAGCAAAATCCACGAAATCCCAGCAAGT ATATACCCCACACAGTGTACCTTTTCGTGAAGTACAGTACCAAGTATAAT AAAGAATAATCGACGGAACAATCATTATGAAAGATCCGTCTCCAATCATA AAAGCTGTACGAATTGCTTTGTGACTGTTCCCTTTGGATGCAGAGACTCT CAAATCGTTTCCTCTCGAAAATATTTGATGTACAACAGATTATGCAGGAT GACGGTCCCTGGAAGAGGAGCAGGAGGAGGAGGAAGACGAAGACGAATTA ATAGATAACGTAGATAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig8527:2162..6029+

>mRNA_F-serratus_M_contig8527.19917.1 ID=mRNA_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=CDS|length=918bp|location=Sequence derived from alignment at F-serratus_M_contig8527:2162..6029+ (Fucus serratus male)
ATGGCTACCAAGGACATCGCCGCCGGAGTCACGCTGGTGCGAATCGCTCG
TAGCTGCTGCATCGGCCCTGAGACGGCGGACGCATCGTCGGGCGAGTGGC
GCGAGGCAATGGCCTCCGCCGGCGTCGTCGGCGCCGCATCTGCATGGCTA
CCAAGGACATCGCCGCCGGAGTCACGCTGGTGCGAATCGCTCGTAGCTGC
TGCATCGGCCCTGAGACGGCGGACGCATCGTCGGGCGAGTGGCGCGAGGC
AATGGCCTCCGCCGGCGTCGTCGGCGCCGCATCTGCGGATGGGCAGAAGC
CGATGGGCCCACCGTTGACACGAGCGTGTTTCACCGTGCTGCGCCTGCTG
CACGAACGAGGGCTTGGGAAGGCGTCTCCCTTCTCTGCCTACCTCAGCGT
CCTCCCGTTGGACCACCGCTTGCCGATGGAGTGGAACGAGTCTGAGGTTG
AGCTGCTTAAGGGATGGGCAGAAGCCGATGGGCCCACCGTTGACACGAGC
GTGTTTCACCGTGCTGCGCCTGCTGCACGAACGAGGGCTTGGGAAGGCGT
CTCCCTTCTCTGCCTACCTCAGCGTCCTCCCGTTGGACCACCGCTTGCCG
ATGGAGTGGAACGAGTCTGAGGTTGAGCTGCTTAAGGGTACTTCGGCGGA
ACCGCTGGTGAGCGCAGCAAGCCTGGACAGCCAATTCGAAGCTTTCGAGC
GGGTGCGTCTGCACCCGAGCATGTGGGTCCCAGCGTATGCTCCAAAACCG
CGTTCGCTAAGGGGGTTAACTGGGTGAGGTACTTCGGCGGAACCGCTGGT
GAGCGCAGCAAGCCTGGACAGCCAATTCGAAGCTTTCGAGCGGGTGCGTC
TGCACCCGAGCATGTGGGTCCCAGCGTATGCTCCAAAACCGCGTTCGCTA
AGGGGGTTAACTGGGTGA
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