mRNA_F-serratus_M_contig8527.19917.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.640e-65 Identity = 148/309 (47.90%), Postives = 186/309 (60.19%), Query Frame = 1
Query: 1 QGYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQ--KPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERV-RLHPSMWVPAYAPKP---------RSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQPSWS*IPVTRHSWRSREQARREG---VKVTWERRLAMAA--KGAGEGRR*SF 876
+GYRGV+ATKDI LVRIARSCC+GPET D S W +AM+++ V + G+ KP P LTRAC TVLRLLHERGLG++SPF +YLSVLP DHRLP+EW E+EV LL+GTSAEPLV A SLDSQFEAF+ V HP++W P+ K RS RG T G H + A + S I T +++ P + G VFSSFG++SNAQLLNSYGFVL GN FD+V + T ++ + +A + G K TWE+RLAM A + A EG + +F
Sbjct: 65 EGYRGVVATKDIPRDAVLVRIARSCCLGPETTDESKNSWTKAMSTSAVDATKTTQGESSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGVNWVRS-RGFTVMGDPH--MIPGADMFNHDPNKQSVQIGTDGEEHF-----VMKTVQ--PVKAGEEVFSSFGHISNAQLLNSYGFVLPGNSFDTVLIPTQL---VVNTCYATFVKLEADKLGEAETKKTWEQRLAMVASNRDADEGEQEAF 360
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.430e-45 Identity = 121/310 (39.03%), Postives = 164/310 (52.90%), Query Frame = 1
Query: 1 QGYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGV-----------VGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER-VRLHPSMWVP------AYAPKPRSLR--GLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQPSWS*IPVTRHSWRSREQARREG-----------VKVTWERRLAM 837
+GYRGV+A DI G L+RI+R CCIGP T DAS+ +WR AM AG+ LT ACFTVLRLLHE G G + FS YLS+LP DHR+P+EWN E LL+GT+AEPLV + +L+ Q+ FE V+ HP +W A+A +R G T G + + A + S +S + + ++R P+ G+ VFSSFG ++NAQL+NSYGFVL NPFDSV P+ I R ++ + E++ EG V+ W++RL M
Sbjct: 44 EGYRGVVAKDDIPEGTELLRISRECCIGPATDDASAEQWRRAMGQAGIGNXXXXXXXXXXXXXXXXXXXXXXXKLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWAKEVCSSAAFAKAVNWVRSRGFTVHGEPY--MIPCADMFNHNPSDQSAMFGQASEDSADVF--VMRAVKSIPK--GSEVFSSFGQIANAQLVNSYGFVLPQNPFDSVLV--PAKLVIDACRAAFANLERSGEEGGEXXXXXXXXXVERAWQKRLDM 345
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: K3WGB2_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGB2_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 6.430e-8 Identity = 53/179 (29.61%), Postives = 78/179 (43.58%), Query Frame = 1
Query: 190 LTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFE--RVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL 699
L+ V+ LL+E GLG+ S F+ Y++ LP LPM W+ LK T+A P V + + F +F PS+W A P + A A EP I ++ + N ++++ + GA + E G V S+G LSNA+ L YGFVL
Sbjct: 98 LSPTVLLVMALLYEHGLGEKSRFAGYIAQLPKQIPLPMTWDAKARRALKHTAAAPSVDQELVANMFTSFAVPLATKFPSIWPENVAKDPAHFQWAYTVVSSRAFTIADAT-----EPTLLPVIDMANHAHTNPCAKIVKTDAGAFQLVALRQIEKGEAVTISYGELSNAEFLCRYGFVL 271
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A5J4YBZ4_9CHLO (SET domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBZ4_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 7.250e-8 Identity = 64/260 (24.62%), Postives = 113/260 (43.46%), Query Frame = 1
Query: 4 GYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAE---------------PLVSAAS--LDSQFEAFERVRLHPSM------------WVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPREGGAGVFSSFGNLSNAQLLNSYGFV 696
G RGV+A +DI G L+ I SCC+ T + +++ AG +A+ K P ++ TVL LL+E G G S FSA+L LP +H + W++ ++ L+GT+ E P++ A+ ++ + +E L+ + W+ A + L L M + + + R+ T+ + + ++ E + G + ++G+LS+AQLL +YGFV
Sbjct: 29 GDRGVVAEEDIKEGQQLMLIPMSCCLHMPT------QQEYSLSQAGY--SAAVKHLKEKHPGISPFLATVLLLLYEMGQGSKSKFSAFLQTLPQEHDCVLCWSKGQLSELQGTAIEIAGDSTRTVFEREVLPIMQQATDIWSAEVQTYEAFELYAGLVQSRAFHMLQENWITGSAQEGVELYMLPAIDMINHSTQPDKRNTLLRKSNAEHTVKVDGEAMTIQGFFTMKAERDIAK--GEQLLHTYGDLSDAQLLQTYGFV 278
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A3F2RVL3_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVL3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.340e-7 Identity = 55/188 (29.26%), Postives = 87/188 (46.28%), Query Frame = 1
Query: 208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERV--RLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSVCSSQP 738
T + LL E G+ S FS Y+ LP D LP+ WN E+LK T+A P++ + + ++ + P++W P + L ++ + A I +EP I ++ + N ++R +DG+ + E V S+G+LSNAQLL YGFVL T DS+ + P
Sbjct: 91 TTMALLAEYTRGEKSDFSGYIQQLPTDISLPLTWNAKHREMLKHTTAFPIIDDKLVLKMYSSYAEPLEKSFPTIW-------PSEVSTLERFMWAYSVVSSRAFKIVGEQEPTLLPVIDMANHAVENPAAHIVRADDGSFQLTTLRKVEKNEPVTISYGDLSNAQLLCRYGFVLSTRASSDSILITSP 271
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A8K1C4W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4W9_PYTOL) HSP 1 Score: 62.4 bits (150), Expect = 6.110e-7 Identity = 60/183 (32.79%), Postives = 81/183 (44.26%), Query Frame = 1
Query: 208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAF--ERVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YR-EPICSTTIPTSSRSRLNRWRRLLRNEDG-----APRE--GGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
TVL LL+E+ G+AS F YL LP +PM W LLK T+A P+V + S F+ + +W P S+ LT ++ + A I R EP I ++ + + R +G A R V S+G LSNAQLL YGFVL T P DS+
Sbjct: 95 TVLALLNEKSKGEASAFHGYLQQLPSRVAVPMTWTAESRALLKDTAASPIVDFELVQSLFQRYLSPLAASFSELW-------PASVASLTEFIWAYSVISSRAFAINDRQEPTLLPVIDMANHDPTDSNAIIQRTPEGNYTLSATRAIASDEAVTISYGELSNAQLLCRYGFVLPTTVPTDSI 270
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: V9FCG7_PHYPR (SET domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FCG7_PHYPR) HSP 1 Score: 60.1 bits (144), Expect = 3.220e-6 Identity = 54/183 (29.51%), Postives = 81/183 (44.26%), Query Frame = 1
Query: 208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER--VRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*YR-EPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
T L L E G S F Y+ LP LP W+E E+LK T+A P++ + +E + + P++W P + L ++ + A + EP I ++ S N +++ + G+ + E G V S+GNLSNAQLL YGFVL T P DS+
Sbjct: 90 TTLALWAELARGDKSDFHGYIQQLPTTISLPFSWDEKHREMLKNTTAFPILDDKLVLKLYEDYAAPLTKEFPAIW-------PTEVSTLKKFQWAYSMVSSRAFKVADAPEPTLLPVIDMANHSAENPAAHIVKTDSGSFQLVALRKVENGEPVTISYGNLSNAQLLCRYGFVLPTLVPSDSI 265
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A7R9VAF8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VAF8_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 6.280e-6 Identity = 80/301 (26.58%), Postives = 122/301 (40.53%), Query Frame = 1
Query: 4 GYRGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQF-EAFERVRLHPSMWVPAYAPK-----PRSLRGLTG*G--------MEHACLRHS-AIHI*YR-------------------EPICSTTIPTSSRSRLNRWRRLLRNE-DG------------APREGGAG--VFSSFGNLSNAQLLNSYGFVLTGNPFDSVCSSQ-----PSW 744
G RGV+A DIA G LV + CC+ ++ + A V P P + VL ++ E G+ SPFS YL+ LP D + W+++E + LKGT+ + ++ ++ E RV P +W PA A P + G G + A L S A H+ + + I +T P + L+++ + E DG A R+ AG V ++G+LS+AQL+ +YGFV G D S + PSW
Sbjct: 53 GDRGVVARADIAKGENLVIVPTDCCMHLPADESDLSDPAPRAARHLVT-------SSPRPSPFLGS---VLMVMSELAAGRDSPFSDYLAALPDDVNCVLGWSQAEKDELKGTTIDDSTQRSAGEAYASEVAPRVAARPDLWPPAAAASAERAAPAGTKTAGGSGGLDGLREFLRVASLVQSRAFHMEAQNWITGVREEGTELFLIPAIDMINHSTDPARRNTSLHKFDVRMEVEVDGRNVVFDAFFAMKADRDIRAGEQVLHTYGDLSDAQLVQTYGFVDLGPGGDPGMSDRCVGIMPSW 343
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: H3GBJ5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBJ5_PHYRM) HSP 1 Score: 58.2 bits (139), Expect = 2.300e-5 Identity = 52/183 (28.42%), Postives = 85/183 (46.45%), Query Frame = 1
Query: 208 TVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER--VRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGA-------PREGGAGVFSSFGNLSNAQLLNSYGFVL-TGNPFDSV 723
T L LL E G+ S F Y+ LP LP W+++ E+L+ T+A P++ + S + ++ ++ P++W P + L ++ + A + +EP I ++ + + ++ E G+ E G V S+GNLSNAQLL YGFVL T P DS+
Sbjct: 1345 TTLALLAELARGEKSDFHGYIQQLPTAISLPFTWDKTLREMLRHTTAFPILDDKLVLSMYTSYAAPLMKEFPAIW-------PSEVSALEKFQWAYSIVSSRAFTVADVQEPTLLPVIDMANHTAEDPVAHIVETEAGSFQLTALRKAEKGEPVTISYGNLSNAQLLCRYGFVLPTLAPSDSI 1520
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A5D6XTL9_9STRA (SET domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTL9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 3.540e-5 Identity = 72/258 (27.91%), Postives = 106/258 (41.09%), Query Frame = 1
Query: 10 RGVMATKDIAAGVTLVRIARSCCIGPETADASSGEWREAM-------ASAGVVGAASADGQKPMGP----PLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERVRLHPSMWVPAYAPKPRSLRGLTG*GMEHACLRHSAIHI*-YREPICSTTIPTSSRSRLNRWRRLLRNEDGAPR-------EGGAGVFSSFGNLSNAQLLNSYGFVLTGNPFDSVC 726
R ++A I A TL+ ++ + G W + + AG V ++A+ Q+ G L+ VL LLHER + S F Y++ LP LPM W+ LK T+A L +F A R P++W P LT +A + A I EP I ++ + N ++R +DG+ + G V S+G+LSNA+LL YGFVL P S C
Sbjct: 43 RSIVARDAIPAAQTLITLSSGAFVA-------GGAWLHGLETLQRKESEAGAVRFSAAELQELRGELQRLQLSPTLQLVLALLHERARRQQSRFDGYIAQLPAHVSLPMNWSVHGRRQLKRTAA--------LFERF-AVPLARRFPALW-------PADETTLTDFQWAYAVVSSRAFTISGASEPALLPVIDMANHASENPAATIVRADDGSFQLVTLRAVAKGEAVTISYGDLSNAELLCRYGFVLP-EPVPSDC 276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8527.19917.1 >prot_F-serratus_M_contig8527.19917.1 ID=prot_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=polypeptide|length=153bp MATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGback to top mRNA from alignment at F-serratus_M_contig8527:2162..6029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8527.19917.1 ID=mRNA_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=mRNA|length=3868bp|location=Sequence derived from alignment at F-serratus_M_contig8527:2162..6029+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8527:2162..6029+ >mRNA_F-serratus_M_contig8527.19917.1 ID=mRNA_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=CDS|length=918bp|location=Sequence derived from alignment at F-serratus_M_contig8527:2162..6029+ (Fucus serratus male)back to top |