prot_F-serratus_M_contig8527.19917.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8527.19917.1
Unique Nameprot_F-serratus_M_contig8527.19917.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length153
Homology
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BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: D7FPV0_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV0_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.090e-50
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 0 
Query:    1 MATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADGQ--KPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFERV-RLHPSMWVPAYAPKPRSLRGL 150
            +ATKDI     LVRIARSCC+GPET D S   W +AM+++ V    +  G+  KP  P LTRAC TVLRLLHERGLG++SPF +YLSVLP DHRLP+EW E+EV LL+GTSAEPLV A SLDSQFEAF+ V   HP++W P+   K    +G+
Sbjct:   71 VATKDIPRDAVLVRIARSCCLGPETTDESKNSWTKAMSTSAVDATKTTQGESSKPPAPRLTRACLTVLRLLHERGLGESSPFHSYLSVLPQDHRLPLEWTEAEVGLLQGTSAEPLVGAGSLDSQFEAFQSVVAQHPTVWEPSVCTKAAFAKGV 223
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BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Match: A0A836C8N7_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N7_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.340e-32
Identity = 70/149 (46.98%), Postives = 88/149 (59.06%), Query Frame = 0 
Query:    1 MATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGV-----------VGAASADGQKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNESEVELLKGTSAEPLVSAASLDSQFEAFER-VRLHPSMWV 137
            +A  DI  G  L+RI+R CCIGP T DAS+ +WR AM  AG+                          LT ACFTVLRLLHE G G  + FS YLS+LP DHR+P+EWN  E  LL+GT+AEPLV + +L+ Q+  FE  V+ HP +W 
Sbjct:   50 VAKDDIPEGTELLRISRECCIGPATDDASAEQWRRAMGQAGIGNXXXXXXXXXXXXXXXXXXXXXXXKLTSACFTVLRLLHELGEGGKAHFSNYLSILPRDHRIPLEWNAEERALLQGTAAEPLVLSGNLEGQYSVFEELVKEHPGLWA 198
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8527.19917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPV0_ECTSI2.090e-5059.48SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836C8N7_9STRA5.340e-3246.98SET domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10coord: 1..144
e-value: 1.9E-15
score: 58.8
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 1..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8527contigF-serratus_M_contig8527:2180..3535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8527.19917.1mRNA_F-serratus_M_contig8527.19917.1Fucus serratus malemRNAF-serratus_M_contig8527 2162..6029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8527.19917.1 ID=prot_F-serratus_M_contig8527.19917.1|Name=mRNA_F-serratus_M_contig8527.19917.1|organism=Fucus serratus male|type=polypeptide|length=153bp
MATKDIAAGVTLVRIARSCCIGPETADASSGEWREAMASAGVVGAASADG
QKPMGPPLTRACFTVLRLLHERGLGKASPFSAYLSVLPLDHRLPMEWNES
EVELLKGTSAEPLVSAASLDSQFEAFERVRLHPSMWVPAYAPKPRSLRGL
TG*
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