mRNA_F-serratus_M_contig69.17987.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig69.17987.1
Unique NamemRNA_F-serratus_M_contig69.17987.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 3.700e-96
Identity = 151/256 (58.98%), Postives = 191/256 (74.61%), Query Frame = 2
Query:  269 PRFLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTG-LIREPPYSQGFPVKVTGPGTVFIQSTHAARMWRHRLVQRP---GASGYEMMKAAAF----MIGILVLLSW 1012
            PRFLSLG+G+E+LQ+AL   D+ILA E+ F YRGLGL+ E+QP   +GP+ RALGW+G+++DRV+K+TNEGN+P+Y+ L A +PGKV+PV LA+SG +L KP +FLCSV END+ST K+KL  EG   Q  VEMR+++G+GMCYI  GGAA QK LGR ESMVVE GC+AA+S +CKI  EE  G LIREPPY QGF VK+TGPG+VFIQSTH  R+ R     R    G+ G +MMKAA      MI +  +L W
Sbjct:   18 PRFLSLGEGSEVLQVALCPGDAILANEKAFVYRGLGLQQELQP---TGPMGRALGWIGVKNDRVVKFTNEGNSPTYLGLTASLPGKVIPVSLAKSGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIVVFTVLDW 270          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: D8R929_SELML (Altered inheritance of mitochondria protein 24, mitochondrial n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R929_SELML)

HSP 1 Score: 102 bits (254), Expect = 9.050e-21
Identity = 80/263 (30.42%), Postives = 131/263 (49.81%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQ-PFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPE----GPFPQH--HVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQGFPVK--VTGPGTVFIQSTHAARMWRHRLVQRPGASGYEMMKAAAFMIGILVLLSWMFIIYNI 1033
            F   G   ++LQI L  ++ I A   + CY    ++AEV  P  N+G     L WM  R D    +TN G+   Y+ L AP   +++P+DLA   G I+ +   FL SV  NDV+   L  TP     G F      +  ++L G G+ +I AGG+  QK L R E +VV++GC+ A++++ +   ++ +   R   +    P +  +TGPG VFIQS  + R+  H++ +   A  +          G+ + L++  I  ++
Sbjct:   26 FQIFGFEAQVLQIMLKPQEKIQAKSGSMCYTSGSIQAEVNVPQENAGVG--VLQWMMGRPDTSTTFTNAGSEDGYIGLGAPSLARILPIDLAVFGGEIICQREAFLGSV--NDVTVKHL--TPRRVRVGYFGADVGGLLTQKLVGQGLAFITAGGSVLQKKLSRGELLVVDIGCLVAMTSAVECEIKQASPAARRAFFGGECPFQAHLTGPGVVFIQSLPSQRL-AHKIARTISAPHFRDNPRFFISAGVFLFLAYAMIFASL 281          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A2R6XQA1_MARPO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XQA1_MARPO)

HSP 1 Score: 101 bits (252), Expect = 1.570e-20
Identity = 68/211 (32.23%), Postives = 106/211 (50.24%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQ-PFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPR-IFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQGF-PVKVTGPGTVFIQS 898
            F  LG   ++LQI L  ++ + A   + CY    ++ E   P  N+G V     W+  + D +  + N G    Y+ L AP   +V+P+DLA  G  ++  R  FLCS+ +  VS    +    G F      M++L G G+ +I AGG+  QK L R E +VV+ GC+ A++TS ++  +    L R     +      +TGPG VF+QS
Sbjct:   25 FQILGGEAQVLQIMLKPQEKVTARTGSMCYMSDAVQTETNVPAENAGNV--IWQWLFGKVDAISTYVNNGTQDGYIGLGAPSLARVLPIDLAVFGEEIICQRDSFLCSINDVSVSPVATRRARPGMFGGEGFMMQKLVGRGLAFITAGGSIIQKHLARGEVLVVDAGCLVAMTTSVELELKYAGPLKRAFFGGENLLHAHLTGPGVVFVQS 233          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A0K9PRK4_ZOSMR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PRK4_ZOSMR)

HSP 1 Score: 99.8 bits (247), Expect = 7.720e-20
Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAE-VQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGP--FPQHHVEMR-RLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG---FPVKVTGPGTVFIQSTHAARMWRH 925
            F  LG   +++QI L S   + A   + CY    ++ + V      G V + L W+  +    I   N G+   YV +AAP PG+++P+DLA   G +L +P  FLCSV  NDV+ +     P G    P   + +R +L G G+ ++ +GG+ +QKTL   E++V++  CI A++++     + +    R      G     V +TGPG VFIQS    R+ +H
Sbjct:   25 FQILGGEAQIVQIMLKSLQKVTAKPGSMCYMSGSIQMDNVYALEQDGGVWQ-LQWIFGKTAISINLLNSGSDDGYVGIAAPSPGRILPIDLANFGGELLCQPDAFLCSV--NDVTVSNSLEHPRGRNIMPGAEIVLRQKLVGQGLAFLVSGGSVAQKTLQPGETLVMDSACIIAMTSTISFQIKNMNA--RRAIIFGGENHMTVSLTGPGVVFIQSLPFYRLSKH 244          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: K4ADH9_SETIT (Altered inheritance of mitochondria protein 24, mitochondrial n=40 Tax=Poaceae TaxID=4479 RepID=K4ADH9_SETIT)

HSP 1 Score: 93.6 bits (231), Expect = 1.050e-17
Identity = 80/263 (30.42%), Postives = 125/263 (47.53%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFP-NSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVS-TNKLKLTPEG-PFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGAS---GYEMMKAAAFMIGILVL--LSWMFIIYNI 1033
            F   G   ++LQ+ L S++ + A   T CY    ++ +    P N G V +   W+  +      + N G+   YV +AAP PG+++PVDLA   G +L     FLCSV  NDVS T+ ++  P         +  ++L G GM ++  GG+  QK L   E + V+  CI A++T+     +    L R     +      +TGPG VFIQS        HRL QR  +    G  +     F I I++   L+++ I+ +I
Sbjct:   25 FQISGGDVQVLQVMLKSQEKLTAKPGTMCYMSGNMQMDNNYLPENDGGVWQ---WIFGKSVSSTVFFNTGSDDGYVGIAAPFPGRILPVDLANFGGELLCHADAFLCSV--NDVSVTSTVEPRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPQEVITVDAACIVAMTTTINFQLKSPNQLRRAVFGGENQLTASLTGPGVVFIQSLPF-----HRLSQRIASRSVVGPSLRDNPKFFIQIVMFFFLAYVMIVSSI 277          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A2A8D1C1_9BACT (TIGR00266 family protein n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D1C1_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.220e-17
Identity = 66/215 (30.70%), Postives = 102/215 (47.44%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARM 916
            F   GD  +L+++ L   +++ A   T  Y   G+  E+Q     G  +     +      +  +T  G +   VA AAP PGK+VPVDL+Q    L +   FLC+  + +V     K    G F      ++RL+G G  ++ AGG   +  L   E++ V+ GCIAA S +       + G        +G F  K+TGPGTV++QS   AR+
Sbjct:   11 FALKGDDMQLVEVELDPGEAVRAEAGTMLYMSDGV--EMQTDTGGGMFKGFKRMISGESFFITSFTYSGPSKGRVAFAAPYPGKIVPVDLSQHDGFLCQKDAFLCADQDVEVEVAFNKKLGAGLFGGEGFILQRLTGQGWAFVHAGGTIVEHKLEAGETLRVDTGCIAAFSGTVDYDINFVGGFRNALFGGEGVFLAKLTGPGTVYLQSLPFARL 223          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A521RJ11_9GAMM (TIGR00266 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ11_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 5.610e-17
Identity = 62/212 (29.25%), Postives = 100/212 (47.17%), Query Frame = 2
Query:  287 GDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARM 916
            GD  +L+++ L   + + A   T  Y   G+  E+Q     G  +     +      +  + N G A   VA AAP PGK+VP DL    G +L +   FLC+    ++     K    G F      +++LSG+GM ++ AGG   +K L   E + V+ GC+ A + +     + + G        +G F  K+TGPGTV++QS   +R+
Sbjct:   11 GDDLQLVEVELDPGEGVRAEAGTMTYMEQGI--EMQTDTGGGVFQGFKRMLTGESFFITTFMNSGKAKRRVAFAAPYPGKIVPFDLDSFGGQVLCQKDSFLCAARGTEIEIAFTKKIGAGLFGGEGFILQKLSGNGMVFVHAGGTVIRKDLAAGEELRVDTGCLVAFAMTVDYDIQFIGGFKNALFGGEGLFLAKMTGPGTVYLQSLPFSRL 220          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A7C7S3W1_9BACT (TIGR00266 family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A7C7S3W1_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 1.920e-16
Identity = 66/234 (28.21%), Postives = 109/234 (46.58%), Query Frame = 2
Query:  284 LGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIK--------WTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASG 955
            +GD  +++++ L   ++++A      Y   G+  E +    S P E   G +     RV+         ++NEG +   VA AAP PGK++P+ LA   G ++ +   FLC+    ++     K    G F      ++RL G GM ++  GG   +KTL  +E + V+ GC+AA ++      E    L       +G F   ++G GTV++QS   +RM    L   P A G
Sbjct:   11 IGDDMQIVEVELDPGETVIAEAGAMNYMDDGITFEAKMGDGSNPGEGIFGKLLNVGKRVLTGESIFLTHFSNEGRSKKRVAFAAPYPGKIIPIHLADVQGELMCQKDAFLCAAFGTEIGIAFTKRLGAGFFGGEGFILQRLRGDGMTFVHVGGTVIRKTL-NNERIRVDTGCLAAFTSGIHYDIERAGSLKSMFFGGEGLFLATLSGTGTVWLQSLPFSRMADRILQHAPAAGG 243          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A7C3BJY5_9CHLR (TIGR00266 family protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BJY5_9CHLR)

HSP 1 Score: 89.4 bits (220), Expect = 2.180e-16
Identity = 65/233 (27.90%), Postives = 106/233 (45.49%), Query Frame = 2
Query:  287 GDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIK--------WTNEGNAPSYVALAAPIPGKVVPVDLAQSG-PILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASG 955
            GD  + ++I L  +++++A      Y   G+  + +    S P     G +G    R I         +TN G    +VA  AP PGK+V VDL  +G  +L +   FLC+    +++ +  K    G F      +++L G G  +I AGG   +K L   E ++V+ GCIAA  +S +   + + GL       +G F   + G G V++QS   +R+    L   P   G
Sbjct:   13 GDDLQFVEIELDPQETVVAEAGAMMYMEDGISFDAKMGDGSNPKSGFFGALGSMAKRAITGESLFMTHFTNNGQGKKHVAFGAPYPGKIVAVDLDDTGGELLCQKNAFLCAALGTEITISFQKKFGAGLFGGEGFILQKLRGDGNIFIHAGGMVVEKQL-NGEKLMVDTGCIAAFESSIQYDIQRVGGLKSMALGGEGLFFATLQGTGRVWLQSLPFSRLADRVLANAPSVGG 244          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A3L6TGM2_PANMI (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6TGM2_PANMI)

HSP 1 Score: 89.7 bits (221), Expect = 2.180e-16
Identity = 76/236 (32.20%), Postives = 111/236 (47.03%), Query Frame = 2
Query:  275 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFP-NSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEM---RRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASGYEM 964
            F   G   ++LQ+ L S++ + A   T CY    ++ +    P N G V +   W+  +      + N G+   YV +AAP PG+++PVDLA   G +L +   FLCSV  NDVS     + P     +   EM   ++L G GM ++  GG+  QK L   E + V+  CI A++ +     +    L R            +TGPG VFIQS        HRL QR   + YEM
Sbjct:   25 FQISGGDVQVLQVMLKSQEKLTAKPGTMCYMSGNMQMDNNYLPENDGGVWQ---WIFGKSVSSTVFFNPGSDDGYVGIAAPFPGRILPVDLANFGGELLCQADAFLCSV--NDVSVAST-VEPRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPREVITVDAACIVAMTITINFQLKSPNQLRRAVFGGDNQLTASLTGPGVVFIQSLPF-----HRLSQR--IARYEM 247          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ3_ECTSI3.700e-9658.98Altered inheritance of mitochondria protein 24, mi... [more]
D8R929_SELML9.050e-2130.42Altered inheritance of mitochondria protein 24, mi... [more]
A0A2R6XQA1_MARPO1.570e-2032.23Altered inheritance of mitochondria protein 24, mi... [more]
A0A0K9PRK4_ZOSMR7.720e-2032.00Altered inheritance of mitochondria protein 24, mi... [more]
K4ADH9_SETIT1.050e-1730.42Altered inheritance of mitochondria protein 24, mi... [more]
A0A2A8D1C1_9BACT1.220e-1730.70TIGR00266 family protein n=1 Tax=Longibacter salin... [more]
A0A521RJ11_9GAMM5.610e-1729.25TIGR00266 family protein n=1 Tax=Gammaproteobacter... [more]
A0A7C7S3W1_9BACT1.920e-1628.21TIGR00266 family protein n=1 Tax=Nitrospira sp. Ta... [more]
A0A7C3BJY5_9CHLR2.180e-1627.90TIGR00266 family protein n=2 Tax=Chloroflexi TaxID... [more]
A0A3L6TGM2_PANMI2.180e-1632.20Altered inheritance of mitochondria protein 24, mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig69contigF-serratus_M_contig69:718145..721129 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score106.7
Seed ortholog evalue1.8e-20
Seed eggNOG ortholog88036.EFJ34258
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial biogenesis AIM24
EggNOG OGs2QVFQ@2759,37M7G@33090,3GGP2@35493,COG2013@1
Ec32 ortholog descriptionTryptophan RNA-binding attenuator protein-like domain
Ec32 orthologEc-07_005040.1
COG Functional cat.S
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons5
Model size1431
Cds size819
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932108.910407-UTR-F-serratus_M_contig69:718144..7183671622932108.910407-UTR-F-serratus_M_contig69:718144..718367Fucus serratus maleUTRF-serratus_M_contig69 718145..718367 +
1690964151.2888198-UTR-F-serratus_M_contig69:718144..7183671690964151.2888198-UTR-F-serratus_M_contig69:718144..718367Fucus serratus maleUTRF-serratus_M_contig69 718145..718367 +
1622932109.0081964-UTR-F-serratus_M_contig69:720740..7211291622932109.0081964-UTR-F-serratus_M_contig69:720740..721129Fucus serratus maleUTRF-serratus_M_contig69 720741..721129 +
1690964151.3694642-UTR-F-serratus_M_contig69:720740..7211291690964151.3694642-UTR-F-serratus_M_contig69:720740..721129Fucus serratus maleUTRF-serratus_M_contig69 720741..721129 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932108.926082-CDS-F-serratus_M_contig69:718367..7185791622932108.926082-CDS-F-serratus_M_contig69:718367..718579Fucus serratus maleCDSF-serratus_M_contig69 718368..718579 +
1690964151.3018677-CDS-F-serratus_M_contig69:718367..7185791690964151.3018677-CDS-F-serratus_M_contig69:718367..718579Fucus serratus maleCDSF-serratus_M_contig69 718368..718579 +
1622932108.9427965-CDS-F-serratus_M_contig69:719210..7193661622932108.9427965-CDS-F-serratus_M_contig69:719210..719366Fucus serratus maleCDSF-serratus_M_contig69 719211..719366 +
1690964151.3123033-CDS-F-serratus_M_contig69:719210..7193661690964151.3123033-CDS-F-serratus_M_contig69:719210..719366Fucus serratus maleCDSF-serratus_M_contig69 719211..719366 +
1622932108.9587915-CDS-F-serratus_M_contig69:719739..7198581622932108.9587915-CDS-F-serratus_M_contig69:719739..719858Fucus serratus maleCDSF-serratus_M_contig69 719740..719858 +
1690964151.3233476-CDS-F-serratus_M_contig69:719739..7198581690964151.3233476-CDS-F-serratus_M_contig69:719739..719858Fucus serratus maleCDSF-serratus_M_contig69 719740..719858 +
1622932108.9748971-CDS-F-serratus_M_contig69:720134..7202961622932108.9748971-CDS-F-serratus_M_contig69:720134..720296Fucus serratus maleCDSF-serratus_M_contig69 720135..720296 +
1690964151.3353493-CDS-F-serratus_M_contig69:720134..7202961690964151.3353493-CDS-F-serratus_M_contig69:720134..720296Fucus serratus maleCDSF-serratus_M_contig69 720135..720296 +
1622932108.9938586-CDS-F-serratus_M_contig69:720570..7207401622932108.9938586-CDS-F-serratus_M_contig69:720570..720740Fucus serratus maleCDSF-serratus_M_contig69 720571..720740 +
1690964151.3576026-CDS-F-serratus_M_contig69:720570..7207401690964151.3576026-CDS-F-serratus_M_contig69:720570..720740Fucus serratus maleCDSF-serratus_M_contig69 720571..720740 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig69.17987.1prot_F-serratus_M_contig69.17987.1Fucus serratus malepolypeptideF-serratus_M_contig69 718368..720740 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig69.17987.1

>prot_F-serratus_M_contig69.17987.1 ID=prot_F-serratus_M_contig69.17987.1|Name=mRNA_F-serratus_M_contig69.17987.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MDDQTTESANDTKTTPRFLSLGDGNELLQIALASEDSILAGERTFCYRGL
GLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPG
KVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMR
RLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTG
LIREPPYSQGFPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASGYEMMKA
AAFMIGILVLLSWMFIIYNIPS*
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mRNA from alignment at F-serratus_M_contig69:718145..721129+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig69.17987.1 ID=mRNA_F-serratus_M_contig69.17987.1|Name=mRNA_F-serratus_M_contig69.17987.1|organism=Fucus serratus male|type=mRNA|length=2985bp|location=Sequence derived from alignment at F-serratus_M_contig69:718145..721129+ (Fucus serratus male)
GAGGGATAGCTCTGTATTAATCCAGGAGAGCTCTTTTGCCGGTGTGACCC ACGATCATTTGATTACACTACCCCAGCACCTGATATATTCGTGTTTGAGT TAGCCTGCCGTCGTGATTCACTGCCAAGCTGCGAGTCTGTTCGTTCGTCT TTGAACAGAACAGCCTTCCCGGACTTGATACAAATCTCCCCGCATCTTAC AGCCTACTAGTGCCGACCGAGTTATGGACGACCAGACAACTGAATCTGCC AATGACACGAAGACGACACCACGATTTCTTTCGCTGGGGGATGGAAACGA ACTGCTTCAGATTGCTCTGGCATCCGAGGACTCCATCCTTGCAGGCGAAC GTACGTTTTGCTATCGAGGTCTTGGCTTGCGGGCAGAGGTACAGCCCTTC CCCAACAGTGGTCCGGTTGAAAGGGCCCTAGGATGGTGAGCGACCAAATT ACTGCTGGTAGATCCTCAGCAATAAAGAGTGGAAAGGTGCAAGCATAATT TTCTCAACATATCTCTCCCTGCTTGTTGAAAATAATGTGATAAATCTCAA AAGTCGAGTAGGCAGCAAATACTCTATTAAATCGCAGCTCTTGGTACTGC CACCGGTGTTCTGTAACGGCTCCAACCCATCGCTCGCCTGAAGGAATCCG TATGCCCTATCATATTTAACTCATCCTGGTGCGTAATGATTGCCTGAGAT TGCGTGGAGCCCGGGACTTAAGATGCAGCCCACCGTCGCGAATAATATGT GAAGGAGAGCGGTTTCAGCAGTAATGCAAACCTGTCCTTTCTTACGGGTA GAGCAAGCGGCGGTACGTCTTGGGTCCGATCGTACAGCTGCTGCCGCACC GCTGGTGTAACCCGCCCGGAAGAAAATTTCGTGTCATGTTTACAGACCTC TGTCTTTTATAGCAGTCAGAGGCGTCACCCCCGCATCCATGGAACACATA GACTAACCTGCTCGTCAAGACGCAAGACGGATCTCTCTCTGTTATAGCAG TCAAAGGTGACACCCCCGCATCCATTGACAATGGTCGAACTTTTCGTGCC GCGCCGCCTTGCAAAGGATGGGATTGAGGGACGATAGAGTAATAAAATGG ACGAACGAGGGCAACGCTCCGTCGTACGTTGCGCTCGCCGCTCCCATCCC CGGCAAAGTTGTTCCCGTCGACTTGGCGCAATCGGGGCCCATTCTCGTTA AGCCGCGGATCTTCCTCTGCAGGTACACAGTATTAGAGCTACGGTACATA TTTTGTAAAACTAATATGTAATTCGTGCGGTGCATTTGGTCCCAAGATCA TGCAATGGACAATCGAACGGGCTGCACGAGACTTTGCGGATCTCGCCACG CTATGCCATGCCATGCCATGCCGGTGCTTGGAATGCGTGATCGTCGCTCT AGAGTGAGGCAATCTTGAAACTATTGAGTACGTTTTCTTCAGAACAAAGG TTAAAGGCTCATCAGCTACCGCAATGTGCCCTTTTCTCACGAGATGCTCG CTTCACTAAGAGTGGTCGAGGAAAATATGAGCTAGTTTGTCCTTTGGGAA GTCGCTTACTTGCACTGTTCTTCGATTCTTACGTTGCAACAACAGTGTGG CAGAAAACGACGTCTCAACGAACAAGTTGAAGCTCACCCCGGAAGGACCT TTTCCTCAGCACCACGTTGAGATGCGACGGTTATCAGGTTCTGGAATGTG CTATATTCAAGCAGGTACCGCGTATGCGATGGGTTGCGGTTTCGGAGTAC CGTAGTTGCCAATGAGTGAACGCATACATGTTCGTGACTTTTGGGCTTGT TAACCCGCAGGAATCTTGCGCTCGGTGAGCTGGTCGACTCCGTAGAGAGC TAGCTCGACACGCTCTGAAAACTGCCCTTCAACCACCCAGATTCTGAGTC ACTCGTCTCAAGTTCTTCGGGTTTCTGCCGTTCTTTCAGGCAAGAAACGC CTGCTGACTTTTCTCGCAATCATTTTCGCGTCACGTGCAGGAGGGGCAGC GAGTCAGAAAACGCTGGGGCGTTCTGAATCGATGGTTGTAGAGATGGGTT GCATCGCGGCAATCTCTACGTCGTGCAAAATCGCCGCAGAAGAGCTAACG GGTCTCATTCGGGAACCGCCTTACTCCCAGGGTTTTCCGGTCAAAGTCAC GGGTGAGAGCGCCCGCAATGTGTTAGCCTACACAACTACCTCTCTGGGCT TATGAGTTTGCAATATACTGGTAACTATTAATTGATCTCCTCTTTCGCTT TTTTTTGTGGCACCGCGAGATCACTCTGTGAAGTGTGAGAATCCCGATGA ACCGGCAGCACCAGTCTACGGATTTTGACGATTTTGACGGACGCCCCTGA CGAGGAGGGGCGAAACCCTTGCCCTCACACTCTTGAGGATCTGTTCAACA CTTTTGCGAAACAATATCGCTTACAGGTCCTGGGACTGTTTTCATACAGT CAACGCACGCGGCGCGCATGTGGAGGCATCGGTTGGTACAACGACCTGGG GCCAGCGGGTACGAAATGATGAAGGCAGCAGCGTTCATGATCGGGATCTT GGTGCTGTTATCATGGATGTTCATAATATATAATATCCCGAGCTGACCAG TTAGCGGAAGAAAAGACGGCGTGTTACATTCTCCCGGCTAGTCACGCGTC GGGTTACCGAGGGCTGCGGCAGTTGGGCAATGGCTGCGCCGCGTCGTGCT TGTGTAGCGAGATGTCATCGTTCTATAAGATATGTTCGCTGAAGGATACA TTTGTAACTATCCAGCTTGAACCCCGTGATTGTGTGTAATATCGTTAGAC TTTGTTGAGTTACCGTCGTCCCCAAAGTTGCACGTAAGAGTGCCAATCCA GACGCTAAAGGAAATATAATTACCTCGTCAATCGAACCCTTCACTAAATT TGTATTGAAAGTAATCGAGCCCCACCCCCGTGCAGGCCAAGTGTCTCCTC AGCTAGAGCTTCAAAGCGCGTTTCCTCTCGTAGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig69:718145..721129+

>mRNA_F-serratus_M_contig69.17987.1 ID=mRNA_F-serratus_M_contig69.17987.1|Name=mRNA_F-serratus_M_contig69.17987.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig69:718145..721129+ (Fucus serratus male)
ATGGACGACCAGACAACTGAATCTGCCAATGACACGAAGACGACACCACG
ATTTCTTTCGCTGGGGGATGGAAACGAACTGCTTCAGATTGCTCTGGCAT
CCGAGGACTCCATCCTTGCAGGCGAACGTACGTTTTGCTATCGAGGTCTT
GGCTTGCGGGCAGAGGTACAGCCCTTCCCCAACAGTGGTCCGGTTGAAAG
GGCCCTAGGATGATGGACGACCAGACAACTGAATCTGCCAATGACACGAA
GACGACACCACGATTTCTTTCGCTGGGGGATGGAAACGAACTGCTTCAGA
TTGCTCTGGCATCCGAGGACTCCATCCTTGCAGGCGAACGTACGTTTTGC
TATCGAGGTCTTGGCTTGCGGGCAGAGGTACAGCCCTTCCCCAACAGTGG
TCCGGTTGAAAGGGCCCTAGGATGGATGGGATTGAGGGACGATAGAGTAA
TAAAATGGACGAACGAGGGCAACGCTCCGTCGTACGTTGCGCTCGCCGCT
CCCATCCCCGGCAAAGTTGTTCCCGTCGACTTGGCGCAATCGGGGCCCAT
TCTCGTTAAGCCGCGGATCTTCCTCTGCAGGATGGGATTGAGGGACGATA
GAGTAATAAAATGGACGAACGAGGGCAACGCTCCGTCGTACGTTGCGCTC
GCCGCTCCCATCCCCGGCAAAGTTGTTCCCGTCGACTTGGCGCAATCGGG
GCCCATTCTCGTTAAGCCGCGGATCTTCCTCTGCAGTGTGGCAGAAAACG
ACGTCTCAACGAACAAGTTGAAGCTCACCCCGGAAGGACCTTTTCCTCAG
CACCACGTTGAGATGCGACGGTTATCAGGTTCTGGAATGTGCTATATTCA
AGCAGTGTGGCAGAAAACGACGTCTCAACGAACAAGTTGAAGCTCACCCC
GGAAGGACCTTTTCCTCAGCACCACGTTGAGATGCGACGGTTATCAGGTT
CTGGAATGTGCTATATTCAAGCAGGAGGGGCAGCGAGTCAGAAAACGCTG
GGGCGTTCTGAATCGATGGTTGTAGAGATGGGTTGCATCGCGGCAATCTC
TACGTCGTGCAAAATCGCCGCAGAAGAGCTAACGGGTCTCATTCGGGAAC
CGCCTTACTCCCAGGGTTTTCCGGTCAAAGTCACGGGAGGGGCAGCGAGT
CAGAAAACGCTGGGGCGTTCTGAATCGATGGTTGTAGAGATGGGTTGCAT
CGCGGCAATCTCTACGTCGTGCAAAATCGCCGCAGAAGAGCTAACGGGTC
TCATTCGGGAACCGCCTTACTCCCAGGGTTTTCCGGTCAAAGTCACGGGT
CCTGGGACTGTTTTCATACAGTCAACGCACGCGGCGCGCATGTGGAGGCA
TCGGTTGGTACAACGACCTGGGGCCAGCGGGTACGAAATGATGAAGGCAG
CAGCGTTCATGATCGGGATCTTGGTGCTGTTATCATGGATGTTCATAATA
TATAATATCCCGAGCTGAGTCCTGGGACTGTTTTCATACAGTCAACGCAC
GCGGCGCGCATGTGGAGGCATCGGTTGGTACAACGACCTGGGGCCAGCGG
GTACGAAATGATGAAGGCAGCAGCGTTCATGATCGGGATCTTGGTGCTGT
TATCATGGATGTTCATAATATATAATATCCCGAGCTGA
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