prot_F-serratus_M_contig69.17987.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig69.17987.1
Unique Nameprot_F-serratus_M_contig69.17987.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length273
Homology
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 5.100e-99
Identity = 151/256 (58.98%), Postives = 191/256 (74.61%), Query Frame = 0
Query:   16 PRFLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTG-LIREPPYSQGFPVKVTGPGTVFIQSTHAARMWRHRLVQRP---GASGYEMMKAAAF----MIGILVLLSW 263
            PRFLSLG+G+E+LQ+AL   D+ILA E+ F YRGLGL+ E+QP   +GP+ RALGW+G+++DRV+K+TNEGN+P+Y+ L A +PGKV+PV LA+SG +L KP +FLCSV END+ST K+KL  EG   Q  VEMR+++G+GMCYI  GGAA QK LGR ESMVVE GC+AA+S +CKI  EE  G LIREPPY QGF VK+TGPG+VFIQSTH  R+ R     R    G+ G +MMKAA      MI +  +L W
Sbjct:   18 PRFLSLGEGSEVLQVALCPGDAILANEKAFVYRGLGLQQELQP---TGPMGRALGWIGVKNDRVVKFTNEGNSPTYLGLTASLPGKVIPVSLAKSGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIVVFTVLDW 270          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A2R6XQA1_MARPO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XQA1_MARPO)

HSP 1 Score: 101 bits (252), Expect = 7.960e-22
Identity = 68/211 (32.23%), Postives = 106/211 (50.24%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQ-PFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPR-IFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQGF-PVKVTGPGTVFIQS 225
            F  LG   ++LQI L  ++ + A   + CY    ++ E   P  N+G V     W+  + D +  + N G    Y+ L AP   +V+P+DLA  G  ++  R  FLCS+ +  VS    +    G F      M++L G G+ +I AGG+  QK L R E +VV+ GC+ A++TS ++  +    L R     +      +TGPG VF+QS
Sbjct:   25 FQILGGEAQVLQIMLKPQEKVTARTGSMCYMSDAVQTETNVPAENAGNV--IWQWLFGKVDAISTYVNNGTQDGYIGLGAPSLARVLPIDLAVFGEEIICQRDSFLCSINDVSVSPVATRRARPGMFGGEGFMMQKLVGRGLAFITAGGSIIQKHLARGEVLVVDAGCLVAMTTSVELELKYAGPLKRAFFGGENLLHAHLTGPGVVFVQS 233          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: D8R929_SELML (Altered inheritance of mitochondria protein 24, mitochondrial n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R929_SELML)

HSP 1 Score: 100 bits (248), Expect = 3.200e-21
Identity = 79/256 (30.86%), Postives = 128/256 (50.00%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQ-PFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPE----GPFPQH--HVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQGFPVK--VTGPGTVFIQSTHAARMWRHRLVQRPGASGYEMMKAAAFMIGILVLLSW 263
            F   G   ++LQI L  ++ I A   + CY    ++AEV  P  N+G     L WM  R D    +TN G+   Y+ L AP   +++P+DLA   G I+ +   FL SV  NDV+   L  TP     G F      +  ++L G G+ +I AGG+  QK L R E +VV++GC+ A++++ +   ++ +   R   +    P +  +TGPG VFIQS  + R+  H++ +   A  +          G+ + L++
Sbjct:   26 FQIFGFEAQVLQIMLKPQEKIQAKSGSMCYTSGSIQAEVNVPQENAGVG--VLQWMMGRPDTSTTFTNAGSEDGYIGLGAPSLARILPIDLAVFGGEIICQREAFLGSV--NDVTVKHL--TPRRVRVGYFGADVGGLLTQKLVGQGLAFITAGGSVLQKKLSRGELLVVDIGCLVAMTSAVECEIKQASPAARRAFFGGECPFQAHLTGPGVVFIQSLPSQRL-AHKIARTISAPHFRDNPRFFISAGVFLFLAY 274          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A0K9PRK4_ZOSMR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PRK4_ZOSMR)

HSP 1 Score: 99.8 bits (247), Expect = 4.300e-21
Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAE-VQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGP--FPQHHVEMR-RLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG---FPVKVTGPGTVFIQSTHAARMWRH 234
            F  LG   +++QI L S   + A   + CY    ++ + V      G V + L W+  +    I   N G+   YV +AAP PG+++P+DLA   G +L +P  FLCSV  NDV+ +     P G    P   + +R +L G G+ ++ +GG+ +QKTL   E++V++  CI A++++     + +    R      G     V +TGPG VFIQS    R+ +H
Sbjct:   25 FQILGGEAQIVQIMLKSLQKVTAKPGSMCYMSGSIQMDNVYALEQDGGVWQ-LQWIFGKTAISINLLNSGSDDGYVGIAAPSPGRILPIDLANFGGELLCQPDAFLCSV--NDVTVSNSLEHPRGRNIMPGAEIVLRQKLVGQGLAFLVSGGSVAQKTLQPGETLVMDSACIIAMTSTISFQIKNMNA--RRAIIFGGENHMTVSLTGPGVVFIQSLPFYRLSKH 244          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A2A8D1C1_9BACT (TIGR00266 family protein n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D1C1_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 9.690e-19
Identity = 66/215 (30.70%), Postives = 102/215 (47.44%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARM 231
            F   GD  +L+++ L   +++ A   T  Y   G+  E+Q     G  +     +      +  +T  G +   VA AAP PGK+VPVDL+Q    L +   FLC+  + +V     K    G F      ++RL+G G  ++ AGG   +  L   E++ V+ GCIAA S +       + G        +G F  K+TGPGTV++QS   AR+
Sbjct:   11 FALKGDDMQLVEVELDPGEAVRAEAGTMLYMSDGV--EMQTDTGGGMFKGFKRMISGESFFITSFTYSGPSKGRVAFAAPYPGKIVPVDLSQHDGFLCQKDAFLCADQDVEVEVAFNKKLGAGLFGGEGFILQRLTGQGWAFVHAGGTIVEHKLEAGETLRVDTGCIAAFSGTVDYDINFVGGFRNALFGGEGVFLAKLTGPGTVYLQSLPFARL 223          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: K4ADH9_SETIT (Altered inheritance of mitochondria protein 24, mitochondrial n=40 Tax=Poaceae TaxID=4479 RepID=K4ADH9_SETIT)

HSP 1 Score: 93.2 bits (230), Expect = 1.100e-18
Identity = 73/227 (32.16%), Postives = 109/227 (48.02%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFP-NSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVS-TNKLKLTPEG-PFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQR 239
            F   G   ++LQ+ L S++ + A   T CY    ++ +    P N G V +   W+  +      + N G+   YV +AAP PG+++PVDLA   G +L     FLCSV  NDVS T+ ++  P         +  ++L G GM ++  GG+  QK L   E + V+  CI A++T+     +    L R     +      +TGPG VFIQS        HRL QR
Sbjct:   25 FQISGGDVQVLQVMLKSQEKLTAKPGTMCYMSGNMQMDNNYLPENDGGVWQ---WIFGKSVSSTVFFNTGSDDGYVGIAAPFPGRILPVDLANFGGELLCHADAFLCSV--NDVSVTSTVEPRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPQEVITVDAACIVAMTTTINFQLKSPNQLRRAVFGGENQLTASLTGPGVVFIQSLPF-----HRLSQR 241          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A521RJ11_9GAMM (TIGR00266 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ11_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 4.920e-18
Identity = 62/212 (29.25%), Postives = 100/212 (47.17%), Query Frame = 0
Query:   22 GDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARM 231
            GD  +L+++ L   + + A   T  Y   G+  E+Q     G  +     +      +  + N G A   VA AAP PGK+VP DL    G +L +   FLC+    ++     K    G F      +++LSG+GM ++ AGG   +K L   E + V+ GC+ A + +     + + G        +G F  K+TGPGTV++QS   +R+
Sbjct:   11 GDDLQLVEVELDPGEGVRAEAGTMTYMEQGI--EMQTDTGGGVFQGFKRMLTGESFFITTFMNSGKAKRRVAFAAPYPGKIVPFDLDSFGGQVLCQKDSFLCAARGTEIEIAFTKKIGAGLFGGEGFILQKLSGNGMVFVHAGGTVIRKDLAAGEELRVDTGCLVAFAMTVDYDIQFIGGFKNALFGGEGLFLAKMTGPGTVYLQSLPFSRL 220          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A7C7S3W1_9BACT (TIGR00266 family protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A7C7S3W1_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 1.820e-17
Identity = 66/234 (28.21%), Postives = 109/234 (46.58%), Query Frame = 0
Query:   21 LGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIK--------WTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASG 244
            +GD  +++++ L   ++++A      Y   G+  E +    S P E   G +     RV+         ++NEG +   VA AAP PGK++P+ LA   G ++ +   FLC+    ++     K    G F      ++RL G GM ++  GG   +KTL  +E + V+ GC+AA ++      E    L       +G F   ++G GTV++QS   +RM    L   P A G
Sbjct:   11 IGDDMQIVEVELDPGETVIAEAGAMNYMDDGITFEAKMGDGSNPGEGIFGKLLNVGKRVLTGESIFLTHFSNEGRSKKRVAFAAPYPGKIIPIHLADVQGELMCQKDAFLCAAFGTEIGIAFTKRLGAGFFGGEGFILQRLRGDGMTFVHVGGTVIRKTL-NNERIRVDTGCLAAFTSGIHYDIERAGSLKSMFFGGEGLFLATLSGTGTVWLQSLPFSRMADRILQHAPAAGG 243          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A3L6TGM2_PANMI (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6TGM2_PANMI)

HSP 1 Score: 89.7 bits (221), Expect = 1.990e-17
Identity = 76/236 (32.20%), Postives = 111/236 (47.03%), Query Frame = 0
Query:   18 FLSLGDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFP-NSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPGKVVPVDLAQ-SGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEM---RRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASGYEM 247
            F   G   ++LQ+ L S++ + A   T CY    ++ +    P N G V +   W+  +      + N G+   YV +AAP PG+++PVDLA   G +L +   FLCSV  NDVS     + P     +   EM   ++L G GM ++  GG+  QK L   E + V+  CI A++ +     +    L R            +TGPG VFIQS        HRL QR   + YEM
Sbjct:   25 FQISGGDVQVLQVMLKSQEKLTAKPGTMCYMSGNMQMDNNYLPENDGGVWQ---WIFGKSVSSTVFFNPGSDDGYVGIAAPFPGRILPVDLANFGGELLCQADAFLCSV--NDVSVAST-VEPRPRNIEIGAEMILKQKLRGQGMAFLVGGGSVMQKILAPREVITVDAACIVAMTITINFQLKSPNQLRRAVFGGDNQLTASLTGPGVVFIQSLPF-----HRLSQR--IARYEM 247          
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Match: A0A7C3BJY5_9CHLR (TIGR00266 family protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BJY5_9CHLR)

HSP 1 Score: 89.4 bits (220), Expect = 2.060e-17
Identity = 65/233 (27.90%), Postives = 106/233 (45.49%), Query Frame = 0
Query:   22 GDGNELLQIALASEDSILAGERTFCYRGLGLRAEVQPFPNSGPVERALGWMGLRDDRVIK--------WTNEGNAPSYVALAAPIPGKVVPVDLAQSG-PILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMRRLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTGLIREPPYSQG-FPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASG 244
            GD  + ++I L  +++++A      Y   G+  + +    S P     G +G    R I         +TN G    +VA  AP PGK+V VDL  +G  +L +   FLC+    +++ +  K    G F      +++L G G  +I AGG   +K L   E ++V+ GCIAA  +S +   + + GL       +G F   + G G V++QS   +R+    L   P   G
Sbjct:   13 GDDLQFVEIELDPQETVVAEAGAMMYMEDGISFDAKMGDGSNPKSGFFGALGSMAKRAITGESLFMTHFTNNGQGKKHVAFGAPYPGKIVAVDLDDTGGELLCQKNAFLCAALGTEITISFQKKFGAGLFGGEGFILQKLRGDGNIFIHAGGMVVEKQL-NGEKLMVDTGCIAAFESSIQYDIQRVGGLKSMALGGEGLFFATLQGTGRVWLQSLPFSRLADRVLANAPSVGG 244          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ3_ECTSI5.100e-9958.98Altered inheritance of mitochondria protein 24, mi... [more]
A0A2R6XQA1_MARPO7.960e-2232.23Altered inheritance of mitochondria protein 24, mi... [more]
D8R929_SELML3.200e-2130.86Altered inheritance of mitochondria protein 24, mi... [more]
A0A0K9PRK4_ZOSMR4.300e-2132.00Altered inheritance of mitochondria protein 24, mi... [more]
A0A2A8D1C1_9BACT9.690e-1930.70TIGR00266 family protein n=1 Tax=Longibacter salin... [more]
K4ADH9_SETIT1.100e-1832.16Altered inheritance of mitochondria protein 24, mi... [more]
A0A521RJ11_9GAMM4.920e-1829.25TIGR00266 family protein n=1 Tax=Gammaproteobacter... [more]
A0A7C7S3W1_9BACT1.820e-1728.21TIGR00266 family protein n=1 Tax=Nitrospira sp. Ta... [more]
A0A3L6TGM2_PANMI1.990e-1732.20Altered inheritance of mitochondria protein 24, mi... [more]
A0A7C3BJY5_9CHLR2.060e-1727.90TIGR00266 family protein n=2 Tax=Chloroflexi TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 20..226
e-value: 3.4E-26
score: 92.3
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 14..240
e-value: 4.7E-29
score: 103.1
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 15..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..249
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 271..272
NoneNo IPR availableTMHMMTMhelixcoord: 251..270
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 21..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig69contigF-serratus_M_contig69:718368..720740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig69.17987.1mRNA_F-serratus_M_contig69.17987.1Fucus serratus malemRNAF-serratus_M_contig69 718145..721129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig69.17987.1 ID=prot_F-serratus_M_contig69.17987.1|Name=mRNA_F-serratus_M_contig69.17987.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MDDQTTESANDTKTTPRFLSLGDGNELLQIALASEDSILAGERTFCYRGL
GLRAEVQPFPNSGPVERALGWMGLRDDRVIKWTNEGNAPSYVALAAPIPG
KVVPVDLAQSGPILVKPRIFLCSVAENDVSTNKLKLTPEGPFPQHHVEMR
RLSGSGMCYIQAGGAASQKTLGRSESMVVEMGCIAAISTSCKIAAEELTG
LIREPPYSQGFPVKVTGPGTVFIQSTHAARMWRHRLVQRPGASGYEMMKA
AAFMIGILVLLSWMFIIYNIPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom