mRNA_F-serratus_M_contig149.3352.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 77.8 bits (190), Expect = 5.060e-15 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 ETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E E+ + V+++V RP+D+ +IG+K ++K K G DG+VEKYK RLVAQGF QVEG+ Y E ++P + + S R
Sbjct: 1015 EAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIR 1089
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR) HSP 1 Score: 77.4 bits (189), Expect = 6.810e-15 Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 7 EMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E+L V+ +Y +V RP+D+ V+G K +++ K G DG++EKYK R+VA+GF QVEGV YT+ ++P + AS R
Sbjct: 304 ELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIR 376
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI) HSP 1 Score: 75.5 bits (184), Expect = 3.270e-14 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 7 EMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E+L + Y +V RP+++ V+G K +++ K G DG VE+YK RLVAQGF QVEG+ Y+E ++P S AS R
Sbjct: 952 ELLAFAKAEPYDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIR 1024
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY) HSP 1 Score: 74.7 bits (182), Expect = 5.850e-14 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 7 EMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
EML V+ ++ +V PK++ V+G+K +++ K G +GK+EKYK RLVAQGF QV+G+ YTE ++P + S R
Sbjct: 16 EMLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIR 88
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A) HSP 1 Score: 67.8 bits (164), Expect = 1.460e-12 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 ETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E E+ + N + V RP+ + V+ K ++KRK +DG+VE+YK RLVA+G+ QVEG+ Y E +SP T S R
Sbjct: 51 EEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIR 125
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: UPI0015ADBDF9 (uncharacterized protein LOC118188897 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADBDF9) HSP 1 Score: 67.8 bits (164), Expect = 5.010e-12 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 ETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E E+ + N + V RP+ + V+ K ++KRK +DG+VE+YK RLVA+G+ QVEG+ Y E +SP T S R
Sbjct: 2 EKELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIR 76
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A1X1QSJ2_9GAMM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. M TaxID=1840537 RepID=A0A1X1QSJ2_9GAMM) HSP 1 Score: 65.5 bits (158), Expect = 9.950e-12 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 ETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
+ EM + +N V++ V PKD+ +G+K ++K K +DG VE YK RLVAQGF QV+G Y E + P S R
Sbjct: 2 KAEMRLLQDNDVWELVELPKDRKNVGSKWVFKVKTNEDGDVEHYKARLVAQGFMQVKGADYDEMFCPVVRLESLR 76
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A2I4GRT0_JUGRE (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Juglans regia TaxID=51240 RepID=A0A2I4GRT0_JUGRE) HSP 1 Score: 65.1 bits (157), Expect = 1.400e-11 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 ETEMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E E++ + N +K V+R D VIG+K +YK K DG +E+ K RLVA+GF QV+GV ++E +SP A+ R
Sbjct: 46 EEELVALAVNQTWKLVSRTADMNVIGSKWVYKAKLKADGTLERLKARLVAKGFSQVDGVDFSETFSPVVKPATIR 120
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 67.8 bits (164), Expect = 1.640e-11 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 7 EMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E+ + N +K V P +K IG K IYK K DG +E+YK RLVAQGF Q+EG+ Y E +SP + S R
Sbjct: 103 EIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVR 175
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 67.8 bits (164), Expect = 1.680e-11 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 7 EMLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 225
E+ + N +K V P +K IG K IYK K DG +E+YK RLVAQGF Q+EG+ Y E +SP + S R
Sbjct: 572 EIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVR 644 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig149.3352.1 >prot_F-serratus_M_contig149.3352.1 ID=prot_F-serratus_M_contig149.3352.1|Name=mRNA_F-serratus_M_contig149.3352.1|organism=Fucus serratus male|type=polypeptide|length=72bp MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFback to top mRNA from alignment at F-serratus_M_contig149:301194..301418+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig149.3352.1 ID=mRNA_F-serratus_M_contig149.3352.1|Name=mRNA_F-serratus_M_contig149.3352.1|organism=Fucus serratus male|type=mRNA|length=225bp|location=Sequence derived from alignment at F-serratus_M_contig149:301194..301418+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig149:301194..301418+ >mRNA_F-serratus_M_contig149.3352.1 ID=mRNA_F-serratus_M_contig149.3352.1|Name=mRNA_F-serratus_M_contig149.3352.1|organism=Fucus serratus male|type=CDS|length=432bp|location=Sequence derived from alignment at F-serratus_M_contig149:301194..301418+ (Fucus serratus male)back to top |