prot_F-serratus_M_contig149.3352.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig149.3352.1
Unique Nameprot_F-serratus_M_contig149.3352.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length72
Homology
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 77.4 bits (189), Expect = 6.090e-15
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            V+++V RP+D+ +IG+K ++K K G DG+VEKYK RLVAQGF QVEG+ Y E ++P + + S R
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIR 1089          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 75.9 bits (185), Expect = 2.100e-14
Identity = 34/72 (47.22%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +L  V+  +Y +V RP+D+ V+G K +++ K G DG++EKYK R+VA+GF QVEGV YT+ ++P +  AS R
Sbjct:  305 LLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIR 376          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 73.9 bits (180), Expect = 1.010e-13
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +L   +   Y +V RP+++ V+G K +++ K G DG VE+YK RLVAQGF QVEG+ Y+E ++P S  AS R
Sbjct:  953 LLAFAKAEPYDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIR 1024          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 73.2 bits (178), Expect = 1.810e-13
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            ML  V+  ++ +V  PK++ V+G+K +++ K G +GK+EKYK RLVAQGF QV+G+ YTE ++P +   S R
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIR 88          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 72.8 bits (177), Expect = 2.580e-13
Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +Y +V +P+ + V+G K ++K K G DG +EKYK RLVA+GF QVEG+ YT+ ++P S  AS R
Sbjct: 1020 LYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIR 1083          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 72.4 bits (176), Expect = 3.520e-13
Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +L   +  +Y +V RP+++ V+  K +++ K+G DGK++KYK RLVA+GF QVEGV YT+ ++P +  AS R
Sbjct:  987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIR 1058          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 71.2 bits (173), Expect = 8.970e-13
Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +L   +  +Y +V RP+++ V+G K ++K K G DG++EKYK RLVA+GF QVE V Y E ++PT+  ++ R
Sbjct:  972 LLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIR 1043          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 70.9 bits (172), Expect = 1.220e-12
Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            +Y +V RP+D+ V+  K ++K K G DG+++KYK RLVA+GF QVEG+ +TE ++P +  AS R
Sbjct:  655 LYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVR 718          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 67.8 bits (164), Expect = 3.310e-12
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
            M  + +N  +  V  PKD+  IG K ++KRK   +GK+ KYK RLVA+G+ Q+EGV Y E +SP +   S R
Sbjct:  101 MKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIR 172          
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 68.6 bits (166), Expect = 7.990e-12
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    3 GMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTSSTASFR 72
              V+  +Y +V RP+++ VI  K ++K K G DG++EKYK RLVA+GF QVEG+ + E ++P +  AS R
Sbjct:  951 AFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVR 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig149.3352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK6.090e-1553.13Integrase catalytic domain-containing protein (Fra... [more]
A0A1C7MSU6_GRIFR2.100e-1447.22Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SUY4_PYCCI1.010e-1347.22Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A2R6NNP3_9APHY1.810e-1345.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VV58_TRAPU2.580e-1350.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI3.520e-1344.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY8.970e-1344.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H7NTQ9_9APHY1.220e-1248.44Integrase catalytic domain-containing protein n=1 ... [more]
UPI001CB79F243.310e-1244.44hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
A0A401G4V0_9APHY7.990e-1245.71Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..68
e-value: 9.3E-13
score: 48.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..64
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 12..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig149contigF-serratus_M_contig149:301203..301418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig149.3352.1mRNA_F-serratus_M_contig149.3352.1Fucus serratus malemRNAF-serratus_M_contig149 301194..301418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig149.3352.1 ID=prot_F-serratus_M_contig149.3352.1|Name=mRNA_F-serratus_M_contig149.3352.1|organism=Fucus serratus male|type=polypeptide|length=72bp
MLGMVENCVYKQVARPKDKLVIGTKMIYKRKNGQDGKVEKYKCRLVAQGF
WQVEGVHYTEKYSPTSSTASFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like