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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FT57 |
| ProteomeId | EsuBft559_9 |
| Protein domains | IPR006689 |
| Protein domains | IPR005225 |
| Protein domains | IPR027417 |
| Protein domains | IPR006687 |
| Protein domains | IPR024156 |
| Protein domains | PTHR11711 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | adp-ribosylation factor-like protein 8b os:macaca fascicularis gn:arl8b pe:2 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 983 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.14e-123 |
| EggNOG OGs | COG1100@1|root,KOG0075@2759|Eukaryota |
| Ec32 ortholog description | ARL8, ARF-like Ras superfamily GTPase |
| Ec32 ortholog | Ec-19_003510.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Preferred name | ARL8A |
| KEGG ko | ko:K01197,ko:K07955,ko:K07977 |
| KEGG Reaction | R07824,R07825,R10905 |
| KEGG Pathway | ko00531,ko01100,map00531,map01100 |
| KEGG Module | M00076,M00077 |
| GOs | GO:0000166,GO:0000306,GO:0000323,GO:0000819,GO:0001666,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005819,GO:0005856,GO:0005886,GO:0006810,GO:0006887,GO:0006928,GO:0006950,GO:0006955,GO:0006996,GO:0007017,GO:0007018,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0008088,GO:0008092,GO:0008150,GO:0008333,GO:0009628,GO:0009987,GO:0010008,GO:0010970,GO:0012505,GO:0012506,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019898,GO:0022402,GO:0030141,GO:0030496,GO:0030659,GO:0030667,GO:0030705,GO:0031090,GO:0031312,GO:0031410,GO:0031902,GO:0031982,GO:0032418,GO:0032419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032940,GO:0035577,GO:0035639,GO:0036094,GO:0036230,GO:0036293,GO:0042119,GO:0042582,GO:0043014,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045202,GO:0045321,GO:0046903,GO:0046907,GO:0048487,GO:0048786,GO:0050896,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051640,GO:0051641,GO:0051649,GO:0070482,GO:0070820,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098588,GO:0098793,GO:0098805,GO:0098813,GO:0098852,GO:0099111,GO:0099503,GO:0101002,GO:0101003,GO:1901265,GO:1901363 |
| EC | 3.2.1.35 |
| Description | Belongs to the small GTPase superfamily. Arf family |
| COG category | L |
| BRITE | ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042,ko04031,ko04131 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0006886 |
| GO | 0005525 |
| GO | 0007059 |
| GO | 0007264 |
| GO | 0019003 |
| GO | 0030496 |
| GO | 0043014 |
| GO | 0048487 |
| GO | 0070062 |
| GO | 0005765 |
| GO | 0051233 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft559_9a-0001 ID=EsuBft559_9a-0001|Name=EsuBft559_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=983bp|location=Sequence derived from alignment at Scaffold_230:246226..249601- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AACAAGAGAGCGGAGCGCCGAGAGCACCCACGACGTATCATTTAGTCTTC
ATTGGATAGCCCTTCAAGCGACGCGACTGCAGTCGGTCTTCTCTACCAAA
GTATTCCTACGAGTGACTCTGCGACGGCTGCTGTGTTGGCTGTCGGCTGC
TGCGACAACAGCAGTGCACCTTGCGCGGGAGCAAGTGTTCCCGTCGTTCC
TCTCCTCTCTCTCTCGACTCCTTCCTCTCCGTCTATCTTGTTCCAGCGGG
CACAACAACCTCTGCCCAACCGCAGCTGTGAAAAGAATTCCTTTTGTTTG
GGCTGCCTTAGAATTGTGGGTAGGCGACAGCGTTACTGTGATACCGAGCA
CGGCGGATAGCCGGCATACATACACCCGGCGGGCGCAACTAGCAGGGAGG
GTTTGGGGACGAAATCATCAATCATGGGGGCCGCCTTCCAGCGCATGCTC
TCGGCGTTCTACACGCGACAGCTGGAAGTGGTGCTGGTCGGTCTGGAGAA
CAGCGGGAAGACGACCTTGATGAATGTTCTCGCTAGCGGTCACCCGGTGG
ACACGGTTCCCACCATCGGGCTCAACGTCAAGATGATCAAGCGGGGCGGG
GTGCAAATGAAGTGCTGGGACATCGGGGGACAGGCCCAGTACCGTGGCGA
GTGGGGCCGCTACACCAGAGGGTGCGACGTGATCGTCTACGTTGTTGATG
CTCACGCCGAGGAGAAGGCGGCGCTCGCCAGACGAGAACTGCATCGATTA
CTGGAGGACGAGGAGCTGGCGTCTACGCCGCTGCTGGTGTTGGCGAACAA
GGTTGATCTGGAGCCGCATATGAGCGAGGACCAGGTCATCCGGGAGTTGA
ATCTCGACTACGTGACCGCAAACCCTTGGATTCTTATCCCGATATCTGCG
CTCAAGGTGATAAACATTGACCAGGTTTTGCAATGGCTCGTCAAGCAGTC
CCGAGGCTAGGCCGCATGCTCCTACCCCCCCCC back to topprotein sequence of EsuBft559_9a-0001 >EsuBft559_9 ID=EsuBft559_9|Name=EsuBft559_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=178bp
MGAAFQRMLSAFYTRQLEVVLVGLENSGKTTLMNVLASGHPVDTVPTIGL
NVKMIKRGGVQMKCWDIGGQAQYRGEWGRYTRGCDVIVYVVDAHAEEKAA
LARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTAN
PWILIPISALKVINIDQVLQWLVKQSRG back to topmRNA from alignment at Scaffold_230:246226..249601- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft559_9a-0001 ID=EsuBft559_9a-0001|Name=EsuBft559_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3376bp|location=Sequence derived from alignment at Scaffold_230:246226..249601- (Ectocarpus subulatus male Bft15b)
AACAAGAGAGCGGAGCGCCGAGAGCACCCACGACGTATCATTTAGTCTTC
ATTGGATAGCCCTTCAAGCGACGCGACTGCAGTCGGTCTTCTCTACCAAA
GTATTCCTACGAGTGACTCTGCGACGGCTGCTGTGTTGGCTGTCGGCTGC
TGCGACAACAGCAGTGCACCTTGCGCGGGAGCAAGTGTTCCCGTCGTTCC
TCTCCTCTCTCTCTCGACTCCTTCCTCTCCGTCTATCTTGTTCCAGCGGG
CACAACAACCTCTGCCCAACCGCAGCTGTGAAAAGAATTCCTTTTGTTTG
GGCTGCCTTAGAATTGTGGGTAGGCGACAGCGTTACTGTGATACCGAGCA
CGGCGGATAGCCGGCATACATACACCCGGCGGGCGCAACTAGCAGGGAGG
GTTTGGGGACGAAATCATCAATCATGGGGGCCGCCTTCCAGCGCATGCTC
TCGGCGTTCTACACGCGACAGCTGGAAGTGGTGCTGGTCGGTCTGGAGAA
CAGCGGGAAGACGACCTTGATGAATGGTGAGCGCGAAGCAAGTGCTTGGT
ATGCATCCGCCAAAGAGACCCAGCAGTACAACTTACAATTATCCCCTTGT
TGCAGGTACAGGGCGTTCAGCTGTTGCTGCATAAAGCGGTACGGTAATGG
CCTGTGGTGTTATGTTACAACACCAGAGTGCCCATGCAACCATGGCAGAT
GTTAAGCTTCGATCAGTGTGTACTTAATTTGCCCGATGCTTGCAGCCAGC
CCTCCGATAGGTCGACAAAGGTACTGCCGTACCTTTCGGCATTTAATGCG
GCGAGACTTTTGCAACACAGTTCCAGTGCGGCGAGACTCCACACACACCT
GGCCTAGGTTGCGGGGAAGTAACTGGTATGCCATCCGAGAGGAAGAAATC
ACGCGGTGCTCTCTCTGTGCTAGCACCGATAGCCAAGTCCATAAGATAGC
ATAAGACAGCACACAATCAAATAATGGCGTAGGGCTTAGAGTAGCGGTCA
CGGATTTTTTACATTTCTTCCTCGGCTTTCTGCAGACACATACGCCGCGT
TGCCGGCAACGTACTGCTGTACTGGGTACAAGGGTGCGCTGATCGCAGCT
GTATGTTGGGCTTTTGGGGGGGAGAGTGGTATCCTCAGGTCCGACAATTA
AAGGACAGGACAAAAATTGCGCAACTTCGTCCCGCACGGCGGTTGCCACA
AACTACTTCGGTTTTCCTACCTTTGTTGCGTGTGGAAGGGAGCAGTTACA
GGGTCAGTGCGGTCTGCTTTCGTCGTGAACAGTCCTCTAAACTTGCTTTC
TCGCGTACTGCATAGTTCGTTCTTTCAACAGGTCTGCTGTGTGTCTACGG
CGACAAAACGGTAAAAGCATACCCTATGCGTAGGACCAATCGCAACGCCT
CACGTACACCTCCGCGTGTTCGTGCGATGCTGCTATTCTGTCCGCTCCGC
CCCAGTTCTCGCTAGCGGTCACCCGGTGGACACGGTTCCCACCATCGGGC
TCAACGTCAAGGTGCAGTTGTCTTGGGCCTTTCCCTTCGTAGTTGTGATT
TCGGCGATCGCTTTGGTTAGTGGTCAGCGAATCTGGTGGCATGGGTTTAG
CGCAGTTGGCGACAGTAATCTCAAAAAATTTTGGCGTTCAGTCTTGTGAT
GCGGTGCAATCGCGCGCGCGAAAAAGGAGCTTATACGCGCACCTCGTGCG
CCTCTGGCGTCAACACATGCCGCGTCTCATCCCAACCCGACCTGGTTGTG
TCGCCCGGCTGTATGGCTTTCCTGGTACCAATGTCGTTTCAGTCGAGCAT
TTTCAGTCAAACTCAGCCAAACGTTTCGCCCAGGTCCTCTCCAGAGGCAC
ATATTGGCCCAAGTTTGACTACGCGCCGAAATGGCTGATGAATGGCTTCC
CCCATCCAATAAGGTTAGGCTTGCAACAGGTGGCGTGCGCTCATCTTTCA
AACGCGAGAACTGACCCCCCCGGACCAAAAAAAAATAATCAGATGATCAA
GCGGGGCGGGGTGCAAATGAAGTGCTGGGACATCGGGGGACAGGCCCAGT
ACCGTGGCGAGTGGGGCCGCTACACCAGAGGGTGCGACGTGATCGTCTAC
GTTGTTGATGCTCACGCCGAGGAGAAGGTGAAAACCCGCCAAAACGAAAA
GTATTTGTCCGGCTTCCAGGAGCCGGTCTTTCTCCCACTCACTTGGGCAA
TAGGACGGACGGCTGCTGTTATCTAGAACGGGTGGTCTTTTCTGGGGTTG
TATGTATGTTTTCTGAAAACGTCGCTTGCAAGAAATGGGCGCGTGCTTGT
CCCTCTCCTTTTAGTAAGATTGGTTGGAGAGGACCGTTGTTTATGGCTCT
AATCGGGCCAGGCAGGTGTCCTCCATGTTACTCGATCAAGCGATGCATAT
GAAAAACAATCTCCCCTCCCTAACACCCAACACCTACACCCACACGCCTT
CTGCTCCGCCTCGTCCCCCCCCCCCNNNNNNNNNNNNNNNNNNCCCCCCC
CCCCGCCGAGGGCCGCGCGAGCGAAGTGATAGCTTTCGCTCTGGTTAAAA
TGAGAGTGATTGCCCGGCTCAACCCCTCGACGACGTCCCGCTACTGATTC
GTCGCACCCACCTCCAGCATGACCATGCGCCTACACCCATGCCCCCCCCA
AAAATCAAACGTGTTGATGACCAGCTTCAGGTCCTTGTGAAGCGTAGCCT
GGGTCGGTGAAAACCGGGCATACCGCTCCCCCCCCCCCATTGTAGGGATG
CTTGGTGAACGGTCTTATCACGTTACGGCCTGCGTTGACGTGAGTACCAC
CCCCCTCCCCCCCCCCATTGGAAACCCCTCTGCCCAGGCGGCGCTCGCCA
GACGAGAACTGCATCGATTACTGGAGGACGAGGAGCTGGCGTCTACGCCG
CTGCTGGTGTTGGCGAACAAGGTTGATCTGGAGCCGCATATGAGCGAGGA
CCAGGTCATCCGGGAGTTGAATCTCGACTACGTGACCGCAAACCCTTGGA
TTCTTATCCCGATATCTGCGCTCAAGGTAAATCATGTTGCTTTTGGTGGG
TGGTGATGGTGATGGTGATGGTGCTGCTGCCGCTGCCGCTGCCGCCGCTG
CCGCTGTGACAATTGGTCCATGGTTCCTTTTTTGTAGTTCAAGTTTGTTA
TTGTGTGCCACTTCTTTGAGGTCGTCCATCCATGTGGCACGCGCAAGACA
GCCAGAACCAAATACAGTTGTTCATGTTTTTAGCTGGACGCATAACTTCG
CGATCCTTCCTCTCTCGCTCTGCCGCTGTTGAACGGAACGTGACAAAAGG
TGATAAACATTGACCAGGTTTTGCAATGGCTCGTCAAGCAGTCCCGAGGC
TAGGCCGCATGCTCCTACCCCCCCCC back to topCoding sequence (CDS) from alignment at Scaffold_230:246226..249601- >EsuBft559_9a-0001 ID=EsuBft559_9a-0001|Name=EsuBft559_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=537bp|location=Sequence derived from alignment at Scaffold_230:246226..249601- (Ectocarpus subulatus male Bft15b)
ATGGGGGCCGCCTTCCAGCGCATGCTCTCGGCGTTCTACACGCGACAGCT
GGAAGTGGTGCTGGTCGGTCTGGAGAACAGCGGGAAGACGACCTTGATGA
ATGTTCTCGCTAGCGGTCACCCGGTGGACACGGTTCCCACCATCGGGCTC
AACGTCAAGATGATCAAGCGGGGCGGGGTGCAAATGAAGTGCTGGGACAT
CGGGGGACAGGCCCAGTACCGTGGCGAGTGGGGCCGCTACACCAGAGGGT
GCGACGTGATCGTCTACGTTGTTGATGCTCACGCCGAGGAGAAGGCGGCG
CTCGCCAGACGAGAACTGCATCGATTACTGGAGGACGAGGAGCTGGCGTC
TACGCCGCTGCTGGTGTTGGCGAACAAGGTTGATCTGGAGCCGCATATGA
GCGAGGACCAGGTCATCCGGGAGTTGAATCTCGACTACGTGACCGCAAAC
CCTTGGATTCTTATCCCGATATCTGCGCTCAAGGTGATAAACATTGACCA
GGTTTTGCAATGGCTCGTCAAGCAGTCCCGAGGCTAG back to top
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