mRNA_Ecto-sp9_F_contig11096.948.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11096.948.1
Unique NamemRNA_Ecto-sp9_F_contig11096.948.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB0_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 6.410e-157
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 1
Query:    1 QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS 696
            QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDAL MSF+GRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS
Sbjct:   34 QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALFMSFVGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS 265          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH17_9STRA)

HSP 1 Score: 290 bits (742), Expect = 3.490e-95
Identity = 146/230 (63.48%), Postives = 184/230 (80.00%), Query Frame = 1
Query:    7 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A   A +DG+ LVEVEFPPL  D++ED+ SSAYD+S ANVRLAS+F + F+ EGK VS+LLPDE EL++A +DEG  E+   V L T RS+ K TA +LD +   F G  +G + PI  TD+YVA++FSCQELPDL++L++  P+  IVFFNL+LD+ RGDLGLPAFPPKSLHY+FLSQIKPVYLLRTRAYS+++++ P+LVNYQGAQFRVYPG YQ LLD+GS RYK+V
Sbjct:   35 AANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQV 264          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJG4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 8.600e-69
Identity = 123/230 (53.48%), Postives = 159/230 (69.13%), Query Frame = 1
Query:   19 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSG---KRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A +DG+ L+EVEFPPL  + LE    SAYDV+ AN+ LA  FA+SFA   K V+I+LPDE EL  A +D+G      GVT+ +LR S    K      D L ++  G G+ G ++ +EGTD+YV +V S QELPD++EL++L P+  IVF+NL+LD LRGDLG PAFP K     FLSQ+KPVY LRTR YSR+ ++ PF+VNYQG  FR YPG+YQ LLD G+ RY+RV
Sbjct:   89 AMDDGYRLIEVEFPPLPANVLEMDDVSAYDVAKANLNLAIDFAKSFAQNNKRVTIMLPDEDELGIALEDQGTDTPYPGVTVSSLRRSEGEEKERVFKPDQLFLNLFGTGSSGSVKAMEGTDVYVCIVASAQELPDIEELSELEPNKTIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSQVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQYQTLLDTGNGRYRRV 318          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWU4_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.020e-68
Identity = 117/220 (53.18%), Postives = 150/220 (68.18%), Query Frame = 1
Query:   40 LVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGV-IEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            ++E+EFPPL  D++E    SAYDVSSANVRLA  FA+SFA EGK V+I+ PD AE D+A +  G  E    + LR L      T ++   ++M   G+  G  +  +   D+Y+ LVFS QELPDL+ L+   P   +V  NL+LDTLRGDLGLPAFPPK L Y FLSQ+ PVY LRTR YS++I+K PFLVNYQGA FR +PG +Q +LDVG  +Y+RV
Sbjct:    1 MMEIEFPPLPTDFMESPECSAYDVSSANVRLAIDFAKSFATEGKRVAIMFPDRAESDRAIETHGADEPFTNIILRPLAGPAPGTTSSPVDIVMGLFGKQGGRNVNAVPDADMYICLVFSAQELPDLEALHMADPSKPLVMMNLKLDTLRGDLGLPAFPPKDLQYRFLSQVLPVYYLRTRTYSKSITKPPFLVNYQGALFRAFPGGWQSMLDVGGGKYRRV 220          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIG6_TRICV)

HSP 1 Score: 222 bits (566), Expect = 2.410e-68
Identity = 122/230 (53.04%), Postives = 156/230 (67.83%), Query Frame = 1
Query:   19 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSG---KRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A +DG  L+EVEFPPL    LE    SAYD++ ANV LA  FA+SFA  GK V+I+LPDEAE + A D +G      GV + +LR S    K      D L ++  G G+ G ++ +EGTD+Y+ LV S QELPD++EL++L PD  IVF+NL+LD LRGDLG PAFP K     FLS +KPVY LRTR YSR+ ++ PF+VNYQG  FR YPG++Q LLD G+ RY+RV
Sbjct:   52 AIDDGHKLIEVEFPPLPAQVLEMDDVSAYDIAKANVNLAVDFAKSFAQNGKRVTIMLPDEAEAEIAVDSQGTDAPYPGVAISSLRRSEGEEKDRVFKPDQLFLNLFGGGSQGSVKAVEGTDMYIILVASAQELPDVEELSELEPDKTIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSSVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQFQTLLDTGNGRYRRV 281          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QDH7_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.320e-67
Identity = 123/230 (53.48%), Postives = 159/230 (69.13%), Query Frame = 1
Query:   19 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEIS-KGVTLRTLRSSGKRTAATL--DALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A +DGF LVEVEFPPL    LE    SAYDVS AN++LA  FA+SFA + K+V+ILLPDEAE + A DD G  ++   GV + +LR S +    +   + + +S  G+G+G  ++ +E  D+YV +V S QELPD++EL+ L P+  IVF+NL+LD LRGDLG PAFPPK     FLS++KPVY LRTR YSR+    PFLVNYQG  FR YPG++Q LLD GS  Y+RV
Sbjct:   83 AIDDGFRLVEVEFPPLPASVLEMDDVSAYDVSQANLKLAIDFAKSFAQDNKKVAILLPDEAEANIAIDDLGLSDVPYPGVKISSLRKSDEDDDRSFKPEQIFLSLFGQGSGGTVKAMEDVDMYVCIVASAQELPDIEELSLLEPEKPIVFYNLKLDVLRGDLGAPAFPPKDFQDRFLSRVKPVYYLRTRQYSRSTPNPPFLVNYQGCLFRSYPGQFQTLLDTGSGNYRRV 312          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSK6_NANGC)

HSP 1 Score: 221 bits (562), Expect = 2.590e-67
Identity = 115/227 (50.66%), Postives = 154/227 (67.84%), Query Frame = 1
Query:   19 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A +DG+ L+EVEFPPL    +    SSA  + SAN+ LA+  AQ F  EGK+V IL+PD+ ELD   +  G +  S  VT+R +R+    +A T+  L++    R   G + P    DIY++++ S QELPDL+ L++  P   ++FFNL L+T RGDLGLPAFP K LHY FLS IKPVYLLRTR Y++T+S+ PF++NYQGA FR YPG YQC+LD G+ RY+RV
Sbjct:   92 AIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLANEMAQYFVREGKQVVILVPDKDELDLIEEGLGTLSPSPNVTIRAVRARNSESADTMGELILGIFSRAAKGKVLPWYNADIYISVISSGQELPDLEALHQADPTKPLIFFNLNLETHRGDLGLPAFPSKDLHYRFLSNIKPVYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRV 318          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VXL7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.950e-66
Identity = 117/234 (50.00%), Postives = 165/234 (70.51%), Query Frame = 1
Query:    7 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADD-EGGVEISKGVTLRTLRSS--GKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIV-FFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A + A +DG  L+E+EFPPL    LE    SAY+V+ AN++LA  ++++FAAEGK+V+ILLPDEAE +   ++  GG     GV++ +LR S  G       + L +S +G  +GV++P++GTD+Y+ +V S QELPD++EL K + D K++  +NL+LD LRGDLG PAFP K  H  FLSQ++PVY LRTR YSR+I++ P+LVNYQG  FR YPG++Q LLD G+  Y+RV
Sbjct:   44 ATKQAIDDGERLIEIEFPPLPAQVLEMDDVSAYEVTEANLKLAIDYSKAFAAEGKKVTILLPDEAEANIVTENIGGGRNPHPGVSISSLRRSEEGDDRIFKPEQLFLSLLGGKSGVVKPVDGTDMYIIIVASAQELPDVEELAKQLDDDKVICMYNLKLDILRGDLGAPAFPSKEFHDRFLSQVRPVYYLRTRQYSRSIAQPPYLVNYQGCLFRTYPGQFQTLLDAGNGSYRRV 277          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=2 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PW18_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.750e-64
Identity = 119/230 (51.74%), Postives = 160/230 (69.57%), Query Frame = 1
Query:   19 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEIS-KGVTLRTLRSSGKRTAATL--DALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A  DG  L+EVEFPPL  + LE    SAYDV+ AN++LA  FA++FA EGK+V++LLPDEAE + A ++ GG +     VT+ +LR S +        + +L+S  G G+G +++ I  T++YV +V S QELPD++EL+ L PDA IVF+NL+LD LRGDLG PAFP K     FLS++KPVY LRTR YSR+    PF+VNYQG  FR YPG++Q LLD G+ +Y+RV
Sbjct:  124 AMADGNKLIEVEFPPLPANVLELDDVSAYDVAQANLKLALDFAKNFAQEGKKVAVLLPDEAEANIAIENNGGTDNPYPDVTISSLRRSDENDERIFKPEQVLLSLFGNGSGGLVKVIPDTNMYVCIVASAQELPDIEELHGLDPDATIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSEVKPVYYLRTRQYSRSTPNPPFMVNYQGCLFRSYPGQFQTLLDTGNGKYRRV 353          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6X7_THAPS)

HSP 1 Score: 212 bits (540), Expect = 2.090e-64
Identity = 122/241 (50.62%), Postives = 164/241 (68.05%), Query Frame = 1
Query:    7 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADD-EGGVEISKGVTLRTLRSS--GKRTAATLDALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAK-------IVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 693
            A ++A  DG+ L+EVEFPPL  + LE    SAYDV+ ANV LA  FA+SFA+ G +V+I+LPDE+E +   +D + G +   GVTL +LR S  G       + LL+  +GRG+G  ++PIEGT++Y+ +V S QELPD++EL   + D K       IVF+NL+LD LRGDLG PAFP K     FLS++KPVY LRTR YSR+ +K PF++N+QG  FR YPG YQ LLD G+ RY++V
Sbjct:   40 AAQNAIGDGYRLLEVEFPPLPANVLEMDDVSAYDVAKANVNLALDFAKSFASTGSQVAIMLPDESECNIMLEDLKVGDKPYPGVTLTSLRRSEEGDTRVFEPENLLIGLMGRGSGGTVKPIEGTNMYIVIVASAQELPDVEELYDQIKDTKEGEEQPVIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSRVKPVYYLRTRQYSRSTNKPPFILNFQGCIFRSYPGHYQTLLDTGTGRYRKV 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DUF19956.410e-15799.14domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
DUF19953.490e-9563.48domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical8.600e-6953.48protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Hypothetical2.020e-6853.18protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical2.410e-6853.04protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical2.320e-6753.48protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
DUF19952.590e-6750.66domain-containing protein n=3 Tax=Monodopsidaceae ... [more]
Hypothetical1.950e-6650.00protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Hypothetical1.750e-6451.74protein n=2 Tax=Asterionellopsis glacialis TaxID=3... [more]
DUF19952.090e-6450.62domain-containing protein n=1 Tax=Thalassiosira ps... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11096contigEcto-sp9_F_contig11096:644..3997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.0
Seed ortholog evalue8.5e-125
Seed eggNOG ortholog2880.D8LBB0
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896
EggNOG free text desc.Domain of unknown function (DUF1995)
EggNOG OGs28PEZ@1,2QW2X@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF1995
Ec32 orthologEc-27_004580.1
Exons5
Model size696
Cds size696
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11096.948.1prot_Ecto-sp9_F_contig11096.948.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11096 644..3997 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928349.2550507-CDS-Ecto-sp9_F_contig11096:643..8141622928349.2550507-CDS-Ecto-sp9_F_contig11096:643..814Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 644..814 +
1692277841.2041373-CDS-Ecto-sp9_F_contig11096:643..8141692277841.2041373-CDS-Ecto-sp9_F_contig11096:643..814Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 644..814 +
1622928349.268862-CDS-Ecto-sp9_F_contig11096:1530..16401622928349.268862-CDS-Ecto-sp9_F_contig11096:1530..1640Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 1531..1640 +
1692277841.21636-CDS-Ecto-sp9_F_contig11096:1530..16401692277841.21636-CDS-Ecto-sp9_F_contig11096:1530..1640Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 1531..1640 +
1622928349.2856674-CDS-Ecto-sp9_F_contig11096:2184..22541622928349.2856674-CDS-Ecto-sp9_F_contig11096:2184..2254Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 2185..2254 +
1692277841.2264113-CDS-Ecto-sp9_F_contig11096:2184..22541692277841.2264113-CDS-Ecto-sp9_F_contig11096:2184..2254Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 2185..2254 +
1622928349.2977264-CDS-Ecto-sp9_F_contig11096:2998..31631622928349.2977264-CDS-Ecto-sp9_F_contig11096:2998..3163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 2999..3163 +
1692277841.234385-CDS-Ecto-sp9_F_contig11096:2998..31631692277841.234385-CDS-Ecto-sp9_F_contig11096:2998..3163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 2999..3163 +
1622928349.3103778-CDS-Ecto-sp9_F_contig11096:3817..39971622928349.3103778-CDS-Ecto-sp9_F_contig11096:3817..3997Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 3818..3997 +
1692277841.2446303-CDS-Ecto-sp9_F_contig11096:3817..39971692277841.2446303-CDS-Ecto-sp9_F_contig11096:3817..3997Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11096 3818..3997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11096.948.1

>prot_Ecto-sp9_F_contig11096.948.1 ID=prot_Ecto-sp9_F_contig11096.948.1|Name=mRNA_Ecto-sp9_F_contig11096.948.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=232bp
QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQ
SFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAAT
LDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKI
VFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKK
PFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS
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mRNA from alignment at Ecto-sp9_F_contig11096:644..3997+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11096.948.1 ID=mRNA_Ecto-sp9_F_contig11096.948.1|Name=mRNA_Ecto-sp9_F_contig11096.948.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3354bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11096:644..3997+ (Ectocarpus species9 EcSCA_722f female)
CAGGGTGCGGTGGAGGACGCCTTCGAGGACGGCTTTAACCTGGTCGAGGT GGAGTTCCCCCCCCTGCAGCAGGACTACCTGGAGGACTCGGGAAGCTCGG CGTACGACGTCTCCAGCGCCAACGTCCGCCTCGCCTCGCGCTTCGCGCAG AGCTTCGCCGCGGAGGGAAAGGTGGGATTAGCTAGCTCGCAAGGGACGAT ACGGCCAGGTGCACTGGCACAAACGATCTATAATAGTCCAGCTGTGCGTC ACGTGGAATCACAGCCGGTTGTCGACCATCCCAAGCGGGAGGCGGGGCTG ACTTGGGGCCGCCCTCTGGGCTAATTCGATAAAACTTTGGTTGTATCCCC ATCCTCCATTATGTTATTGGTCGGTTCACGTCGATCCCGTGCCTATCGTT TTTCTGTCAATTGCTCATTCATCATTCCCGCCACTCCAGTCCAGTCTTTC ACCAGGTACGCTAGTAGAGCCGAGCTGGGGGCATTAGAAACCGCAATCAA AGCACTGGACTAGGCTGTCTAGTCTAATGGTTTGATTTCGGTTTCTAAAA GGCAGAACAAATTTGTTTCCTCTCCCGCCCTCCCCTGCGGCTCCTTCTGC GCACATGCCTTCAGATTTAGAAAATTTTGTTGGTCTTTCTTTCGGGTCTT TCGAAGACACCGCACTATGCCCTTGTTGCCTTTCTATGTCTGCCACAAAT GGTCGTGATCCTGCCCAATAGAGCAGGCCGGGACCGTACGCCAGCTGGGA AAACCGCGGCGAGTTCTTCTCCAAAACCCAATTGTTTTGCGCCGTTACCT AATTTGTTGTAAAGACAGACGTTTGTTTGTTTGTTTGTTTGTTTTTCTGC TCGCGATGGCTTGTTTGTTGTTTCTTTTTTTTTTTAGGAAGTGTCGATCC TCCTGCCGGATGAGGCGGAGTTAGACCAAGCCGCGGACGACGAGGGTGGG GTGGAGATTTCCAAGGGGGTCACGCTGCGCACGCTGCGCAGCAGTGGGTA AGACACACCACAGGTGTACAGAAGGAGGGACACAGATGTACAGAGAGAAG GACAAGAGAGCCGAGCGGGGGCAGGGGCAGGGAGGAGGGAAAGTGAATGA TGGTCCCATTCGCGGGTGGCTGGGTTGTGGTTTGGTTGTCAGTTGGGAAC TCCGCAGCAGGCGAGAACCAGACGCGGTGCATACCTTCTGCCTTTGATCC ACTTCGGACACTACGGTGTTCGTAGCGCACGGAAAACACTCACGGACCCT GATCTAGACGGCTACAGTACATGTAGCTCGACTCTGTTCCCTGGTCCATG AAGATAGTAGCGCATCTGATGTATGTCCGTGTTACCTGCTAGATCTAGCC GTCATGATCGTTGCTCGAGGACAGCGTTATGATGGGTGCCCTGAAACTGC TGGGTTTTTTTTTCGTCGCGTATTTTCACGCTGCTCACGTTCGATGCTCC CCGCTCCCGGCTTGTCACTTCAATACACGCCACCGCCGTTTTGTTGTGAC TTATATTGTTCTCTATGCTGATTGGTGGTGCGTGCTTCCAGGAAGCGGAC GGCGGCGACTCTAGACGCGCTGCTCATGAGCTTCATCGGCCGCGGCACCG GGGTAATCGAGGTAAGCCAGCCACCCCGGCGAGTGACAGCGTCAATGCTA CTCCTCTCTGTCCTCACTTCCCCATCCCGTTGGAGCGAGCTTTCGTGATT TCGTGATTTGTTGCTTCTTTGTTTTGCGACGTAGGAGGAAGGAGGTTGTG GAACAATGGGTTCGGGGGTACTTTGATGGAAGGCCGTCAGTAGGCTGGGC AGACCGAGCGAGCCCGTGAGCTTTTGAACAGCGGTTAAGAGGGCCTTGCA CTTGTTTTTTCTCTATGGACTATTTCCGTTTGCTACATTGGAGTTGCGAT ATCTTGGCTCAAACTGCCGCCACTATACTACTGATCGCTGTCGCCACTCG TATTTTTGTGTGGTGATCAAGGAAAAAGCGCTGTAGACCCTCTCCAGAAC TCATGGAGCCGCATGCTCGAAAGTACAGCACAGACCAGCGGCAACCAATA CTATTTAGGACTTGTTGGTGTCTCCCCTAAGGGTGATGTTGCACAGCTCT CTTGATTTTCGCAAGCTTTCCGTTTCTGGCGCGTTGCAAAACCCATGAAC CCCCAACCCCCCCCCCGGCCGAATACCTCATGGCGCGTCGCGCTTGGTGA TGTGAGAACCCGGTCCGGTGACAACCCGACGTGCTCCGTCCCGGCTTTGT AGGGATGCGAGGTCAATGGTCTAACCGCTAGGGCATGCAAAACGTAAGAG TACCCCCACCCACCCCCCACCCCCGTCATGCCTCCTTTCGTGCGCGGAAA ACCAGCCAATAGAGGGGACGGACATATACGTGGCCCTGGTGTTCTCGTGC CAGGAGCTGCCCGACCTGCAGGAGCTGAACAAGCTCGTGCCCGACGCGAA GATCGTGTTCTTTAACCTAAGGCTGGACACTCTTCGGGGTGACCTCGGGT TGCCCGCCTTCCCCCCGAAGGTGATTCTTTTTGTCTTTGTTGCGCTTGGC GTTTCTGTCGAAACGAAACGTCGAGCTTGGTCGGGGCTGTCAAGAGCTTG TTTTTGAAAATTGGACGTTCTTGACTGCTGTGTGTCCTCTGACCCGGCTT ACCCCCTGCCTTGGTTGGCGCAGTTTCTGCTGCTTGGCCGTGAGTGCGAT CGTTGTCCTCCCTCACTTGGGCGCGACACGTTTGAGGGGCGACACTGCTC GACTATCGCCCGCCCCCGCCCCCGCCCCCGCTCTCTCCTAAACCAGCTTT GAGAAGTAGCCGGCATTCGAATATTGCGTTCTTTTGATATTCGTGTGTAC TTCCAAATACTATGTGGAAGTCGACAATGGAGAGTGAAATAATAACGAGA ATTGTTGGTTGAGGAAACATCCTACTTCCGACGTCACGTAGAATTCCCTC TTGGTGTCAGGCCTTCCTCTGCCGCAACGTTGTTCTTTGATTTGCGTAAC AAACGTTTGTGGATTTGTCGCGGGGAGAGAGAGGACATGCTATTATTTGG TACGAAAAGCAGCAGTTGGCCTGGAACACATCCAGACACGTTCAACATTC CAGACAAACGCAAGCACCCCTCTCAACAACTCACCCGTCCGCCGCTCGCT GTCCCCCACCCGCGTCACATGCAGAGCCTGCACTACGACTTCCTGTCTCA AATCAAGCCAGTCTACCTGCTCCGCACGCGCGCCTACTCTCGCACCATCT CCAAGAAGCCCTTCCTAGTCAACTACCAAGGAGCGCAGTTCCGCGTGTAC CCGGGAGAATACCAGTGTCTGCTTGATGTCGGGAGCCGATACAAGAGGGT GAGC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11096:644..3997+

>mRNA_Ecto-sp9_F_contig11096.948.1 ID=mRNA_Ecto-sp9_F_contig11096.948.1|Name=mRNA_Ecto-sp9_F_contig11096.948.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11096:644..3997+ (Ectocarpus species9 EcSCA_722f female)
CAGGGTGCGGTGGAGGACGCCTTCGAGGACGGCTTTAACCTGGTCGAGGT
GGAGTTCCCCCCCCTGCAGCAGGACTACCTGGAGGACTCGGGAAGCTCGG
CGTACGACGTCTCCAGCGCCAACGTCCGCCTCGCCTCGCGCTTCGCGCAG
AGCTTCGCCGCGGAGGGAAAGCAGGGTGCGGTGGAGGACGCCTTCGAGGA
CGGCTTTAACCTGGTCGAGGTGGAGTTCCCCCCCCTGCAGCAGGACTACC
TGGAGGACTCGGGAAGCTCGGCGTACGACGTCTCCAGCGCCAACGTCCGC
CTCGCCTCGCGCTTCGCGCAGAGCTTCGCCGCGGAGGGAAAGGAAGTGTC
GATCCTCCTGCCGGATGAGGCGGAGTTAGACCAAGCCGCGGACGACGAGG
GTGGGGTGGAGATTTCCAAGGGGGTCACGCTGCGCACGCTGCGCAGCAGT
GGGAAGTGTCGATCCTCCTGCCGGATGAGGCGGAGTTAGACCAAGCCGCG
GACGACGAGGGTGGGGTGGAGATTTCCAAGGGGGTCACGCTGCGCACGCT
GCGCAGCAGTGGGAAGCGGACGGCGGCGACTCTAGACGCGCTGCTCATGA
GCTTCATCGGCCGCGGCACCGGGGTAATCGAGGAAGCGGACGGCGGCGAC
TCTAGACGCGCTGCTCATGAGCTTCATCGGCCGCGGCACCGGGGTAATCG
AGCCAATAGAGGGGACGGACATATACGTGGCCCTGGTGTTCTCGTGCCAG
GAGCTGCCCGACCTGCAGGAGCTGAACAAGCTCGTGCCCGACGCGAAGAT
CGTGTTCTTTAACCTAAGGCTGGACACTCTTCGGGGTGACCTCGGGTTGC
CCGCCTTCCCCCCGAAGCCAATAGAGGGGACGGACATATACGTGGCCCTG
GTGTTCTCGTGCCAGGAGCTGCCCGACCTGCAGGAGCTGAACAAGCTCGT
GCCCGACGCGAAGATCGTGTTCTTTAACCTAAGGCTGGACACTCTTCGGG
GTGACCTCGGGTTGCCCGCCTTCCCCCCGAAGAGCCTGCACTACGACTTC
CTGTCTCAAATCAAGCCAGTCTACCTGCTCCGCACGCGCGCCTACTCTCG
CACCATCTCCAAGAAGCCCTTCCTAGTCAACTACCAAGGAGCGCAGTTCC
GCGTGTACCCGGGAGAATACCAGTGTCTGCTTGATGTCGGGAGCCGATAC
AAGAGGGTGAGCAGCCTGCACTACGACTTCCTGTCTCAAATCAAGCCAGT
CTACCTGCTCCGCACGCGCGCCTACTCTCGCACCATCTCCAAGAAGCCCT
TCCTAGTCAACTACCAAGGAGCGCAGTTCCGCGTGTACCCGGGAGAATAC
CAGTGTCTGCTTGATGTCGGGAGCCGATACAAGAGGGTGAGC
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