prot_Ecto-sp9_F_contig11096.948.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11096.948.1
Unique Nameprot_Ecto-sp9_F_contig11096.948.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length232
Homology
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB0_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 6.410e-157
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0
Query:    1 QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS 232
            QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDAL MSF+GRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS
Sbjct:   34 QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALFMSFVGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS 265          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH17_9STRA)

HSP 1 Score: 290 bits (742), Expect = 3.490e-95
Identity = 146/230 (63.48%), Postives = 184/230 (80.00%), Query Frame = 0
Query:    3 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A   A +DG+ LVEVEFPPL  D++ED+ SSAYD+S ANVRLAS+F + F+ EGK VS+LLPDE EL++A +DEG  E+   V L T RS+ K TA +LD +   F G  +G + PI  TD+YVA++FSCQELPDL++L++  P+  IVFFNL+LD+ RGDLGLPAFPPKSLHY+FLSQIKPVYLLRTRAYS+++++ P+LVNYQGAQFRVYPG YQ LLD+GS RYK+V
Sbjct:   35 AANKAIQDGYKLVEVEFPPLSVDFMEDTSSSAYDISRANVRLASQFGEFFSIEGKRVSVLLPDEPELERAVEDEGTDELFPRVKLTTARSNIKGTAQSLDQIFSGFFGGKSGEVVPIPNTDMYVAIIFSCQELPDLRKLHEADPEKPIVFFNLKLDSQRGDLGLPAFPPKSLHYEFLSQIKPVYLLRTRAYSKSLARPPYLVNYQGAQFRVYPGAYQSLLDIGSARYKQV 264          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJG4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 8.600e-69
Identity = 123/230 (53.48%), Postives = 159/230 (69.13%), Query Frame = 0
Query:    7 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSG---KRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A +DG+ L+EVEFPPL  + LE    SAYDV+ AN+ LA  FA+SFA   K V+I+LPDE EL  A +D+G      GVT+ +LR S    K      D L ++  G G+ G ++ +EGTD+YV +V S QELPD++EL++L P+  IVF+NL+LD LRGDLG PAFP K     FLSQ+KPVY LRTR YSR+ ++ PF+VNYQG  FR YPG+YQ LLD G+ RY+RV
Sbjct:   89 AMDDGYRLIEVEFPPLPANVLEMDDVSAYDVAKANLNLAIDFAKSFAQNNKRVTIMLPDEDELGIALEDQGTDTPYPGVTVSSLRRSEGEEKERVFKPDQLFLNLFGTGSSGSVKAMEGTDVYVCIVASAQELPDIEELSELEPNKTIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSQVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQYQTLLDTGNGRYRRV 318          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWU4_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.020e-68
Identity = 117/220 (53.18%), Postives = 150/220 (68.18%), Query Frame = 0
Query:   14 LVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGTGV-IEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            ++E+EFPPL  D++E    SAYDVSSANVRLA  FA+SFA EGK V+I+ PD AE D+A +  G  E    + LR L      T ++   ++M   G+  G  +  +   D+Y+ LVFS QELPDL+ L+   P   +V  NL+LDTLRGDLGLPAFPPK L Y FLSQ+ PVY LRTR YS++I+K PFLVNYQGA FR +PG +Q +LDVG  +Y+RV
Sbjct:    1 MMEIEFPPLPTDFMESPECSAYDVSSANVRLAIDFAKSFATEGKRVAIMFPDRAESDRAIETHGADEPFTNIILRPLAGPAPGTTSSPVDIVMGLFGKQGGRNVNAVPDADMYICLVFSAQELPDLEALHMADPSKPLVMMNLKLDTLRGDLGLPAFPPKDLQYRFLSQVLPVYYLRTRTYSKSITKPPFLVNYQGALFRAFPGGWQSMLDVGGGKYRRV 220          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIG6_TRICV)

HSP 1 Score: 222 bits (566), Expect = 2.410e-68
Identity = 122/230 (53.04%), Postives = 156/230 (67.83%), Query Frame = 0
Query:    7 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSG---KRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A +DG  L+EVEFPPL    LE    SAYD++ ANV LA  FA+SFA  GK V+I+LPDEAE + A D +G      GV + +LR S    K      D L ++  G G+ G ++ +EGTD+Y+ LV S QELPD++EL++L PD  IVF+NL+LD LRGDLG PAFP K     FLS +KPVY LRTR YSR+ ++ PF+VNYQG  FR YPG++Q LLD G+ RY+RV
Sbjct:   52 AIDDGHKLIEVEFPPLPAQVLEMDDVSAYDIAKANVNLAVDFAKSFAQNGKRVTIMLPDEAEAEIAVDSQGTDAPYPGVAISSLRRSEGEEKDRVFKPDQLFLNLFGGGSQGSVKAVEGTDMYIILVASAQELPDVEELSELEPDKTIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSSVKPVYYLRTRQYSRSTARPPFMVNYQGCLFRSYPGQFQTLLDTGNGRYRRV 281          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QDH7_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.320e-67
Identity = 123/230 (53.48%), Postives = 159/230 (69.13%), Query Frame = 0
Query:    7 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEIS-KGVTLRTLRSSGKRTAATL--DALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A +DGF LVEVEFPPL    LE    SAYDVS AN++LA  FA+SFA + K+V+ILLPDEAE + A DD G  ++   GV + +LR S +    +   + + +S  G+G+G  ++ +E  D+YV +V S QELPD++EL+ L P+  IVF+NL+LD LRGDLG PAFPPK     FLS++KPVY LRTR YSR+    PFLVNYQG  FR YPG++Q LLD GS  Y+RV
Sbjct:   83 AIDDGFRLVEVEFPPLPASVLEMDDVSAYDVSQANLKLAIDFAKSFAQDNKKVAILLPDEAEANIAIDDLGLSDVPYPGVKISSLRKSDEDDDRSFKPEQIFLSLFGQGSGGTVKAMEDVDMYVCIVASAQELPDIEELSLLEPEKPIVFYNLKLDVLRGDLGAPAFPPKDFQDRFLSRVKPVYYLRTRQYSRSTPNPPFLVNYQGCLFRSYPGQFQTLLDTGSGNYRRV 312          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSK6_NANGC)

HSP 1 Score: 221 bits (562), Expect = 2.590e-67
Identity = 115/227 (50.66%), Postives = 154/227 (67.84%), Query Frame = 0
Query:    7 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALLMSFIGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A +DG+ L+EVEFPPL    +    SSA  + SAN+ LA+  AQ F  EGK+V IL+PD+ ELD   +  G +  S  VT+R +R+    +A T+  L++    R   G + P    DIY++++ S QELPDL+ L++  P   ++FFNL L+T RGDLGLPAFP K LHY FLS IKPVYLLRTR Y++T+S+ PF++NYQGA FR YPG YQC+LD G+ RY+RV
Sbjct:   92 AIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLANEMAQYFVREGKQVVILVPDKDELDLIEEGLGTLSPSPNVTIRAVRARNSESADTMGELILGIFSRAAKGKVLPWYNADIYISVISSGQELPDLEALHQADPTKPLIFFNLNLETHRGDLGLPAFPSKDLHYRFLSNIKPVYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRV 318          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VXL7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.950e-66
Identity = 117/234 (50.00%), Postives = 165/234 (70.51%), Query Frame = 0
Query:    3 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADD-EGGVEISKGVTLRTLRSS--GKRTAATLDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIV-FFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A + A +DG  L+E+EFPPL    LE    SAY+V+ AN++LA  ++++FAAEGK+V+ILLPDEAE +   ++  GG     GV++ +LR S  G       + L +S +G  +GV++P++GTD+Y+ +V S QELPD++EL K + D K++  +NL+LD LRGDLG PAFP K  H  FLSQ++PVY LRTR YSR+I++ P+LVNYQG  FR YPG++Q LLD G+  Y+RV
Sbjct:   44 ATKQAIDDGERLIEIEFPPLPAQVLEMDDVSAYEVTEANLKLAIDYSKAFAAEGKKVTILLPDEAEANIVTENIGGGRNPHPGVSISSLRRSEEGDDRIFKPEQLFLSLLGGKSGVVKPVDGTDMYIIIVASAQELPDVEELAKQLDDDKVICMYNLKLDILRGDLGAPAFPSKEFHDRFLSQVRPVYYLRTRQYSRSIAQPPYLVNYQGCLFRTYPGQFQTLLDAGNGSYRRV 277          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: Hypothetical (protein n=2 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PW18_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.750e-64
Identity = 119/230 (51.74%), Postives = 160/230 (69.57%), Query Frame = 0
Query:    7 AFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEIS-KGVTLRTLRSSGKRTAATL--DALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A  DG  L+EVEFPPL  + LE    SAYDV+ AN++LA  FA++FA EGK+V++LLPDEAE + A ++ GG +     VT+ +LR S +        + +L+S  G G+G +++ I  T++YV +V S QELPD++EL+ L PDA IVF+NL+LD LRGDLG PAFP K     FLS++KPVY LRTR YSR+    PF+VNYQG  FR YPG++Q LLD G+ +Y+RV
Sbjct:  124 AMADGNKLIEVEFPPLPANVLELDDVSAYDVAQANLKLALDFAKNFAQEGKKVAVLLPDEAEANIAIENNGGTDNPYPDVTISSLRRSDENDERIFKPEQVLLSLFGNGSGGLVKVIPDTNMYVCIVASAQELPDIEELHGLDPDATIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSEVKPVYYLRTRQYSRSTPNPPFMVNYQGCLFRSYPGQFQTLLDTGNGKYRRV 353          
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6X7_THAPS)

HSP 1 Score: 212 bits (540), Expect = 2.090e-64
Identity = 122/241 (50.62%), Postives = 164/241 (68.05%), Query Frame = 0
Query:    3 AVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADD-EGGVEISKGVTLRTLRSS--GKRTAATLDALLMSFIGRGTG-VIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAK-------IVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRV 231
            A ++A  DG+ L+EVEFPPL  + LE    SAYDV+ ANV LA  FA+SFA+ G +V+I+LPDE+E +   +D + G +   GVTL +LR S  G       + LL+  +GRG+G  ++PIEGT++Y+ +V S QELPD++EL   + D K       IVF+NL+LD LRGDLG PAFP K     FLS++KPVY LRTR YSR+ +K PF++N+QG  FR YPG YQ LLD G+ RY++V
Sbjct:   40 AAQNAIGDGYRLLEVEFPPLPANVLEMDDVSAYDVAKANVNLALDFAKSFASTGSQVAIMLPDESECNIMLEDLKVGDKPYPGVTLTSLRRSEEGDTRVFEPENLLIGLMGRGSGGTVKPIEGTNMYIVIVASAQELPDVEELYDQIKDTKEGEEQPVIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSRVKPVYYLRTRQYSRSTNKPPFILNFQGCIFRSYPGHYQTLLDTGTGRYRKV 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11096.948.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DUF19956.410e-15799.14domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
DUF19953.490e-9563.48domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical8.600e-6953.48protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Hypothetical2.020e-6853.18protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical2.410e-6853.04protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical2.320e-6753.48protein n=2 Tax=Ditylum brightwellii TaxID=49249 R... [more]
DUF19952.590e-6750.66domain-containing protein n=3 Tax=Monodopsidaceae ... [more]
Hypothetical1.950e-6650.00protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Hypothetical1.750e-6451.74protein n=2 Tax=Asterionellopsis glacialis TaxID=3... [more]
DUF19952.090e-6450.62domain-containing protein n=1 Tax=Thalassiosira ps... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 1..231
e-value: 5.8E-33
score: 114.6
NoneNo IPR availablePANTHERPTHR34051:SF2PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTICcoord: 4..223
NoneNo IPR availablePANTHERPTHR34051FAMILY NOT NAMEDcoord: 4..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11096contigEcto-sp9_F_contig11096:644..3997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11096.948.1mRNA_Ecto-sp9_F_contig11096.948.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11096 644..3997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11096.948.1 ID=prot_Ecto-sp9_F_contig11096.948.1|Name=mRNA_Ecto-sp9_F_contig11096.948.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=232bp
QGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQ
SFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAAT
LDALLMSFIGRGTGVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKI
VFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKK
PFLVNYQGAQFRVYPGEYQCLLDVGSRYKRVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995