Ec-00_007530.4 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_007530.4
Unique NameEc-00_007530.4
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length304
Homology
The following BLAST results are available for this feature:
BLAST of Ec-00_007530.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 121..148
e-value: 3.5
score: 13.3
coord: 212..239
e-value: 220.0
score: 0.6
coord: 149..176
e-value: 1.7
score: 15.6
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 50..255
NoneNo IPR availablePANTHERPTHR24114:SF30LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74Acoord: 50..255
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 98..295
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 211..300
e-value: 2.2E-9
score: 38.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 77..210
e-value: 7.9E-18
score: 66.3
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 240..255
e-value: 0.65
score: 10.2
coord: 121..142
e-value: 0.18
score: 11.9
coord: 149..165
e-value: 0.04
score: 14.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:12035083..12039333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007530.4Ec-00_007530.4Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 12034913..12039412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_007530.4 ID=Ec-00_007530.4|Name=Ec-00_007530.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=304bp
MSISSRSPTSASEHHGRYRGNDIADGYMSDSNFVLTDGKWEVTRVYSETK
WDEDERKRENDVQYQHNQPTGKDAYTAACTRLGIAPSSHILSRLPSSRLS
LRHGLLNPASATALSAGLLGNRCIRSLNLGSNLLRDDSARPLLEAIFGNP
SLTKLDLSRNLLSDDFGVLIARSLSSPVCALKEVVLAENFFSDGFVEALN
KGMRELEEVHGISPLKNLDISNNKISSRVSGALASILGSCANLVRLNLSW
NDLRTDLKTDLFNQRGDCSCPFTTAALWRPGRLVSLELSFNGLSDAFGVE
EKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt