Ec-00_002830.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_002830.1
Unique NameEc-00_002830.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length116
Homology
[Close]
BLAST of Ec-00_002830.1 vs. uniprot
Match: D7FMD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD8_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.560e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MTSAAVSAGNPQQLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGTGWFQDVIFPPGVDVR 115
            MTSAAVSAGNPQQLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGTGWFQDVIFPPGVDVR
Sbjct:    1 MTSAAVSAGNPQQLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGTGWFQDVIFPPGVDVR 115
[Close]
BLAST of Ec-00_002830.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.880e-24
Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 0 
Query:   17 LLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGR-DDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQ 95
            LL AFT+ DN  R+RAE AWED+K RLPD+VLE +CA+LG+ D  E GE  GLRAMAAVLLRTLFD RSDVWFRVQ++TQ
Sbjct:   13 LLGAFTSPDNGVRRRAEEAWEDMKMRLPDQVLEQVCAVLGQADGGEGGE--GLRAMAAVLLRTLFDIRSDVWFRVQQQTQ 90
[Close]
BLAST of Ec-00_002830.1 vs. uniprot
Match: A0A835ZDS9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.240e-16
Identity = 48/103 (46.60%), Postives = 60/103 (58.25%), Query Frame = 0 
Query:   13 QLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGTGWFQDVIFPPGVDVR 115
            +LE LLAAF   DNEAR+ AE  W  +K+  PD V E +C IL           G+RAM+AVLLRTLF  RSD W+R+Q RTQ A      + V+  P   +R
Sbjct:    6 ELEGLLAAFMGLDNEARRAAEERWASIKKSAPDGVAEGLCMILSSTGETQPAYEGIRAMSAVLLRTLFGIRSDFWYRLQPRTQYAVREVLLRSVMEEPVRHIR 108
[Close]
BLAST of Ec-00_002830.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.380e-10
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   46 EVLENMCAILGR-DDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQ 95
            +VLE +CA+LG+ D  E GE  GLRAMAAVLLRTLFD RSDVWFRVQ+ TQ
Sbjct:   47 QVLEQVCAVLGQADGGEVGE--GLRAMAAVLLRTLFDIRSDVWFRVQQETQ 95
The following BLAST results are available for this feature:
BLAST of Ec-00_002830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMD8_ECTSI2.560e-74100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FNE2_ECTSI1.880e-2471.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDS9_9STRA8.240e-1646.60Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A6H5JCW6_9PHAE1.380e-1072.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..101
e-value: 5.7E-7
score: 29.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2968980..2969832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002830.1Ec-00_002830.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 2968980..2969832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_002830.1 ID=Ec-00_002830.1|Name=Ec-00_002830.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=116bp
MTSAAVSAGNPQQLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLEN
MCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGT
GWFQDVIFPPGVDVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold