Ec-28_002390.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002390.1
Unique NameEc-28_002390.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length355
Homology
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BLAST of Ec-28_002390.1 vs. uniprot
Match: A0A6H5L6Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y5_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 1.070e-150
Identity = 276/368 (75.00%), Postives = 282/368 (76.63%), Query Frame = 0 
Query:    1 MLTRLMPLLAFLDAASSWSATATAATTVAFSSPPRMLLDFSTLTSSRRHGGQKHQIEPDNSSSSSR-------------ATFASREXXXXXXRAGERSSATRMSSAPSGEGRREGNRVVGSIARGGGVVAFVTAACSAFPSCSSAVAAAAT-IVGEAGGSEMGARVDPAATTSFAAVVVAFAFLQARIRTAVRARTARRDYEVLFKGMKAKQLAGQADEEEVKLVEERMSQLLREEQEARMVDIFGIPFNLVIPDGGAGGEPGTAAREAQQGRSSGRGEQGXXXXXXXXXXXXXXXXXXXXXQLGIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 354
            MLTRLM LLAFL  ASSWSATATAAT                         QKHQI+PDNSSSSSR             ATFASR        AGERSSATRMSSAPSGEGRREGNRVVGSIARGG VVAFV AACSAFPSCS         IVGEAGGSEMGARVDPAAT SFAAVVVAFAFLQ+RIRTAVRARTARR+YEVLFKGMKAKQLAGQADE+EVKLVEERMSQLL+EEQEAR VDIFGIPFNLVIPDGGAGGEPGTAAREAQQGRSSGRGE G                     QLGIRE+MKAKAESDLR RKAREEEMS GATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD
Sbjct:    1 MLTRLMLLLAFLHTASSWSATATAATXXXXXXXXXXXXXXXXXXXXXXXXXQKHQIDPDNSSSSSRQPWTPMRPLTRGRATFASR--------AGERSSATRMSSAPSGEGRREGNRVVGSIARGGDVVAFVAAACSAFPSCSXXXXXXXXXIVGEAGGSEMGARVDPAATASFAAVVVAFAFLQSRIRTAVRARTARRNYEVLFKGMKAKQLAGQADEKEVKLVEERMSQLLQEEQEARKVDIFGIPFNLVIPDGGAGGEPGTAAREAQQGRSSGRGELGDGGRAAGEGGQQQQ-------QLGIRETMKAKAESDLRGRKAREEEMSTGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 353
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BLAST of Ec-28_002390.1 vs. uniprot
Match: D7FXN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN2_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.610e-33
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:  289 QLGIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 354
            QLGIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD
Sbjct:   69 QLGIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 134
The following BLAST results are available for this feature:
BLAST of Ec-28_002390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Y5_9PHAE1.070e-15075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXN2_ECTSI2.610e-33100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..317
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 341..354
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.597
NoneNo IPR availableTMHMMTMhelixcoord: 318..340
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 155..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2196010..2201013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002390.1Ec-28_002390.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2194783..2203627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002390.1 ID=Ec-28_002390.1|Name=Ec-28_002390.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=355bp
MLTRLMPLLAFLDAASSWSATATAATTVAFSSPPRMLLDFSTLTSSRRHG
GQKHQIEPDNSSSSSRATFASRERATFASRAGERSSATRMSSAPSGEGRR
EGNRVVGSIARGGGVVAFVTAACSAFPSCSSAVAAAATIVGEAGGSEMGA
RVDPAATTSFAAVVVAFAFLQARIRTAVRARTARRDYEVLFKGMKAKQLA
GQADEEEVKLVEERMSQLLREEQEARMVDIFGIPFNLVIPDGGAGGEPGT
AAREAQQGRSSGRGEQGGGGRAAGEGGQQQQQQQQQQQQLGIRESMKAKA
ESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASST
FLQD*
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