Ec-28_001960.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_001960.1
Unique NameEc-28_001960.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length84
Homology
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BLAST of Ec-28_001960.1 vs. uniprot
Match: A0A6H5K0K8_9PHAE (NADH-u_ox-rdase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0K8_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 3.730e-50
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MAFEDPKFPVTDPAPGMGTVFGNLNATDVATVVVATAGSAAWCFKGVKGVRGPNAVVGASLGLMGGLMLAGQSSFGRLTGQRK 83
            MAFEDPKFPVTDPAPGMGTVFGNLNATDVATVVVATAGSAAWCFKGVKG+RGPNAVVGASLGL+GGLMLAGQSSFGRLTGQRK
Sbjct:    1 MAFEDPKFPVTDPAPGMGTVFGNLNATDVATVVVATAGSAAWCFKGVKGIRGPNAVVGASLGLIGGLMLAGQSSFGRLTGQRK 83
The following BLAST results are available for this feature:
BLAST of Ec-28_001960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0K8_9PHAE3.730e-5097.59NADH-u_ox-rdase domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalPFAMPF10785NADH-u_ox-rdasecoord: 6..82
e-value: 4.7E-9
score: 36.8
NoneNo IPR availablePANTHERPTHR34062FAMILY NOT NAMEDcoord: 3..82
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1749771..1750414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001960.1Ec-28_001960.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1748612..1751381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_001960.1 ID=Ec-28_001960.1|Name=Ec-28_001960.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=84bp
MAFEDPKFPVTDPAPGMGTVFGNLNATDVATVVVATAGSAAWCFKGVKGV
RGPNAVVGASLGLMGGLMLAGQSSFGRLTGQRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019721NADH-UbQ_OxRdtase_su21_N