Ec-28_001130.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_001130.1
Unique Name	Ec-28_001130.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	557

Homology

[Close]

BLAST of Ec-28_001130.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 4.590e-125
Identity = 337/438 (76.94%), Postives = 345/438 (78.77%), Query Frame = 0

Query:    1 MGNKMSVSSTFSHASSGGSNSRRGRXXXXXXXXXXXXXXXXXXXXXXXNIDSSSRXXXXXXXXRGVDGGTAYSSSTLTPPRLDDDSGSSGGNTHRFYHPETPRRETAFHCAIWPQLRTPPSAESSETSSLSGGATEGGGSMFVASSTPADSPSRTXXXXXXTASVSTPRGAFGAAAEVGRERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRVSDTGVQGYFTRSRRRFSTQQSGGTREGLALEGWGGSARGAAREQEEVGGAGFSWDSGRA--ARAAPSTTPARRYIPAFSFGSLTSRSRRGSTGVTRSFDERGERRGNAPPRQALHLAPPDWTGTPPRSGPQRCP-------SRATTVTEESTPT 429
            MGNK+SVSSTFS+ASSGGSNSRRGR      XXXXXXX          NIDSSSR  XXXXX RGVDGGTAY+SST TPPRL+DDSGS GGNTHRFYHPETPRRETAFHCA WPQLRTP SAESSETSSLSGGATEGGGSMF A STPADSPS T      TASVSTPR AFGAAA+VG ERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXX                               LALEG GGSARGAAREQ E+GGA FSWDSGRA   RAAPST PARRYIPAF+FGSLTSRSRRGSTGVTRSFDERGE R +APPRQ  HLAPPD TGTP RSGPQR P       SRATTVTEE TPT
Sbjct:    1 MGNKLSVSSTFSYASSGGSNSRRGRGSSYSIXXXXXXXISSI------NIDSSSRSTXXXXXSRGVDGGTAYTSSTRTPPRLNDDSGSGGGNTHRFYHPETPRRETAFHCATWPQLRTPSSAESSETSSLSGGATEGGGSMFAAGSTPADSPSGTAAAAA-TASVSTPRRAFGAAAQVGLERYPMFSLSSLRRVGGVAAAFGGFSTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSICFSXXXXXXXXXXXXX-----------------------------LALEGLGGSARGAAREQREIGGAHFSWDSGRAPATRAAPSTAPARRYIPAFTFGSLTSRSRRGSTGVTRSFDERGESRESAPPRQPPHLAPPDRTGTPHRSGPQRAPCPRALEDSRATTVTEEWTPT 402

The following BLAST results are available for this feature:

BLAST of Ec-28_001130.1 vs. uniprot

BLAST of Ec-28_001130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KTI9_9PHAE	4.590e-125	76.94	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 526..529

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1074615..1077931 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_001130.1	Ec-28_001130.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 1074613..1082620 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_001130.1 ID=Ec-28_001130.1|Name=Ec-28_001130.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=557bp
MGNKMSVSSTFSHASSGGSNSRRGRGSSSSYSRSSNSSSSSISSISSINI
DSSSRSTNIDNSSRGVDGGTAYSSSTLTPPRLDDDSGSSGGNTHRFYHPE
TPRRETAFHCAIWPQLRTPPSAESSETSSLSGGATEGGGSMFVASSTPAD
SPSRTAAAAAATASVSTPRGAFGAAAEVGRERYPMFSLSSLRRVGGVAAA
FGGFSTDSDSGGGGGNGSSDSDSDSSDSSDSDNGDHDSRGFRSAEGSCSD
SSSISCSTRSIGFSDDDDGDGDGGGGGGGGHPRVSDTGVQGYFTRSRRRF
STQQSGGTREGLALEGWGGSARGAAREQEEVGGAGFSWDSGRAARAAPST
TPARRYIPAFSFGSLTSRSRRGSTGVTRSFDERGERRGNAPPRQALHLAP
PDWTGTPPRSGPQRCPSRATTVTEESTPTATPAAASAASPASSSAASASA
SPVGGGGGAGGGGSGGFSAAAAATAASSSPSSSATVLAPTSSSSHSLRTT
AAAATRGTPSTVSMPSSSVSTSSPEEERLXXXXXXXXXXXXXXXXXXXXX
XXXXXXX