Ec-28_003460.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
Overview
Homology
BLAST of Ec-28_003460.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 610 bits (1572), Expect = 9.090e-221 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1 Query: 1 MNVGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDTNHD 891 MNVGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDTNHD Sbjct: 1 MNVGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDTNHD 297
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 283 bits (725), Expect = 4.810e-86 Identity = 146/278 (52.52%), Postives = 189/278 (67.99%), Query Frame = 1 Query: 10 GSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTE 840 GS +KR W+ W+GN FF GRI++G H R L + +L T LFF FI LP+ YG W+F + V+ CL GC +SL ++ +DPGIIPRR A D DV ++ S C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYRAFMAFI +VTIS CA+SV+H V R +VGP+ L + +PGS+ +L +WTA++ VLVG LL FH++L+AKGQTTNEYLR E G+ R F +C ELWCG +P S+L+DM+E Sbjct: 523 GSPKKR---WQRWRGNNKFFCEGRIMLGVHYRQLMTTTMLLFLTWLLFFVFI-LPS--YGRWSF-AMVAACLCTGCFVSLVFSSFLDPGIIPRR--AASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSE 790
BLAST of Ec-28_003460.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 248 bits (632), Expect = 5.090e-76 Identity = 130/272 (47.79%), Postives = 172/272 (63.24%), Query Frame = 1 Query: 10 GSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATI---LLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARP 813 GS +KR W+ W+GN FF GR R ++ + A L ++ +YG W+F + V+ CL GC +SL ++ +DPGIIPRR A D DV ++ S C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYR+FMAFI ++TIS CA+SV+H V R +VGP+ L + +PGS+F +L LWTA++ VLVG LL FH++L+AKGQTTNEYLR E G+ R F +C ELWCG +P Sbjct: 171 GSPKKR---WQRWRGNNKFFCEGRFFFRGGGRGTQGGGSLGSGVGGVAALAWSECCCSLPSYGRWSF-ALVAACLCTGCFVSLVFSSFLDPGIIPRR--AASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 435
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A6H5LMK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMK7_9PHAE) HSP 1 Score: 235 bits (600), Expect = 7.070e-75 Identity = 131/223 (58.74%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 145 TLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARP 813 TL F SLPATTYG AFFSTVSVCLFVGCI+SLASTAMMDPGIIPRRTLALWNSLDPASP +AERK C +CQLARPPRAK+CK GSQF PHLLALWTAVVM+LVGGLL FH+FLV K QTTN YLRREAPSGSRLGRPFL+SCHELW GARP Sbjct: 11 TLPLDFFSLPATTYGVQAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCGSCQLARPPRAKYCK----------------------------------------------------------------------GSQFVPHLLALWTAVVMILVGGLLCFHVFLVTKSQTTNLYLRREAPSGSRLGRPFLASCHELWSGARP 163
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 202 bits (515), Expect = 9.300e-60 Identity = 115/280 (41.07%), Postives = 161/280 (57.50%), Query Frame = 1 Query: 28 RQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS---------CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTE 840 R+ W+ W+GNA F G++++G HC L + +++L T LF F+ A Y GW + V + V C+++LA TA+ +PGIIP + P S D AE S C+TC + RPPRAKHC+ CN CV FDHHCP+ GNCIG RNYR+F+ F+ ++ LS +H + R NVGP L + + +PGS++ L +W +V +VGGLL H++L+ +GQTTNE+L+ E P R GR + C LWC PPSLL E Sbjct: 45 RKWWQQWRGNARFLCDGKLMLGVHCDQLWVTGSLILGTWLLFLVFV---APNYTGW-WCVGVGAAMLVLCLVTLAETAVTEPGIIPPQ---------PRS-DAAEGMSASTRGKLNYCITCHIVRPPRAKHCRHCNVCVRRFDHHCPWIGNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALT-RLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGE-PVHVR-GR-VMRKCLLLWCERLPPSLLPPFDE 306
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 174 bits (440), Expect = 3.650e-48 Identity = 111/290 (38.28%), Postives = 151/290 (52.07%), Query Frame = 1 Query: 34 QWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFT----FISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAER-KSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLL-----------ALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTD 855 +++ W+G F GGRI++G+H L S T+L+ T +LF + +P Y G V L VG + L TA+ +PGIIPRR + L+ S D ++ + C TC++ RPPRAKHC+ C+NCV FDHHCP+TG CIG RNY F FI++ T+S FAC+ S L+V WA G P LL +T +V VLVG LL+FH+FL+ + QTTNE+LR PS S + +L + P S L M E D Sbjct: 85 RYQLWEGKNKFLCGGRIMMGAHSNHLLLSITLLVVTYSLFLLGVVPLLHMPILFYIG--------VGLAVGTLTFLLLTALTEPGIIPRRPPS--KLLESMSEDARQKLQYCHTCRIVRPPRAKHCRYCDNCVEVFDHHCPWTGTCIGVRNYAYFCVFITLATVSAAFACSTSA-------------YLIVQWAE--GRNHEPRLLMYIRDVVAPLVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRGVRPSHSDYKNSTTGNVVKLCNTSIPDSKLLPMWEKCQAD 349
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 167 bits (422), Expect = 1.410e-45 Identity = 89/211 (42.18%), Postives = 115/211 (54.50%), Query Frame = 1 Query: 223 LFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRAD----NVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTE 840 L + L TA+ DPGIIPR + ++ P++ E+ + C TC + RPPR KHC+ CNNC+ FDHHCP+TGNCIG RNYR F F+ +T S + +S ++ D + W +I G QF LL LWT +V LVG LL FHI L+ +GQTTNEYLR E G ++C LWC P S L M E Sbjct: 9 LMAASVAFLLVTALRDPGIIPRHPPS--QLVESMPPEMKEKMNYCPTCHIVRPPRTKHCRHCNNCIQTFDHHCPWTGNCIGRRNYRFFYLFLMSITASSAYVLVMSANYLTRHLTDIDSKYFDAIFKDEW-KIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMPESRLLPMWE 216
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A6A7G8Q1_9CRUS (Palmitoyltransferase n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8Q1_9CRUS) HSP 1 Score: 148 bits (373), Expect = 4.280e-39 Identity = 92/268 (34.33%), Postives = 135/268 (50.37%), Query Frame = 1 Query: 37 WECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVN-WARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRP----FLSSCHELWCGARPPSLL 825 W+ W GN F GRI++GS L + +L +F F+ Y + V LF C++ L A+ DPGI+PR + + P + C TC+L RPPRAKHCK C+NCV +FDHHCP+ G C+G RNYR F+ F+ V ++ F A SV +V ++ +N +A S L ++TA V + V GL S+H+ L+ +GQTTNE +R+ R+ P + +C +C P S + Sbjct: 19 WKQWPGNNIFLCHGRIMLGSDVSFLGVTVVLLTGPFVIFILFVGFEIH-YS----LAIVGAVLFAICLVFLTQAALTDPGILPRSNIPRPDPHQPHQITARGFRYCSTCKLYRPPRAKHCKYCDNCVRQFDHHCPWVGTCVGLRNYRFFVYFVFSVCLTSGFVFATSVAVLVLNTTNSDADGHWINRFADAITSNPASLALVIFTAFVFLSVLGLASYHVNLILQGQTTNENMRQVF---RRVHNPNDHGYKKNCDSTFCSRIPISQI 278
BLAST of Ec-28_003460.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 146 bits (368), Expect = 5.630e-38 Identity = 93/256 (36.33%), Postives = 135/256 (52.73%), Query Frame = 1 Query: 10 GSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPV-LLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRP 771 G R +++E W GN FF GGR+++G C L +A ++ T F F++ P + ++V C + LA+ A DPGI+PR L + L + R + C TCQ+ RPPRAKHC+ C+NCV FDHHCP+ G C+GARNYRAF+ F+ + C+ + ++V R V V++ R + W+AVV + V L++FH++L+ QTTNEYLR E R G P Sbjct: 20 GKARSSFKRYEQWPGNNFFFCGGRLMLGVDCDRLLATALLIATTWAGHF-FVTWPNLDFDERCGAGGIAVL----CFVCLAAAATRDPGIVPR--LPRSDRLSGLPCETQYRMNWCQTCQILRPPRAKHCRYCDNCVRVFDHHCPWLGTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLV--RCSTVHACSAYVDFGR----PIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDE-----RRGHP 257
BLAST of Ec-28_003460.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.120e-36 Identity = 90/248 (36.29%), Postives = 133/248 (53.63%), Query Frame = 1 Query: 7 VGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLAL----WTAVVMVLVGGLLSFHIFLVAKGQTTNEYLR 735 V +L ++ +E W+G +F GRI++G+ L + ++L T +F I +P A +S LF +++L TA+ DPGI+PRR + P + ER C TC + +P R KHC+ C+NCV EFDHHCP+ GNCIGARNYR F+ FI ++ F ++S+ ++ L+V PG+ +LAL WT ++ LVG L FH L+ GQTTNEY++ Sbjct: 107 VSTLDMSKKHFEQWKGRNSFLLRGRIMLGAMAHQLGITLVLMLITWGIFLCLI-VPLLRN---AVLVVLSFMLFTTQLVALLCTALTDPGILPRRPPSAVVESMPMQ--MKERMHYCPTCHIIKPHRTKHCRICDNCVQEFDHHCPWVGNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGG-----LIVQVQDDPGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVK 343 The following BLAST results are available for this feature:
BLAST of Ec-28_003460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_003460.1 ID=Ec-28_003460.1|Name=Ec-28_003460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=298bpback to top spliced messenger RNA >Ec-28_003460.1 ID=Ec-28_003460.1|Name=Ec-28_003460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=894bp|location=Sequence derived from alignment at chr_28:3278045..3281389+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGAACGTGGGATCTCTCCGCAAGCGCAGACAGCAATGGGAGTGCTGGCAback to top protein sequence of Ec-28_003460.1 >Ec-28_003460.1 ID=Ec-28_003460.1|Name=Ec-28_003460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=298bp MNVGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLback to top mRNA from alignment at chr_28:3278045..3281389+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-28_003460.1 ID=Ec-28_003460.1|Name=Ec-28_003460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3345bp|location=Sequence derived from alignment at chr_28:3278045..3281389+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_28:3278045..3281389+ >Ec-28_003460.1 ID=Ec-28_003460.1|Name=Ec-28_003460.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=894bp|location=Sequence derived from alignment at chr_28:3278045..3281389+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-28_003460.1' has the following synonyms
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