|
Homology
BLAST of Ec-28_001410.1 vs. uniprot
Match: D8LGV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV8_ECTSI) HSP 1 Score: 1095 bits (2833), Expect = 0.000e+0 Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 2
Query: 446 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 2287
MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA
Sbjct: 1 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 614
BLAST of Ec-28_001410.1 vs. uniprot
Match: A0A6H5L0M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M1_9PHAE) HSP 1 Score: 886 bits (2290), Expect = 2.510e-311 Identity = 513/664 (77.26%), Postives = 530/664 (79.82%), Query Frame = 2
Query: 446 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEV---------------------------GFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKE-----------------------VESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 2287
MTSLPKRIRPVPLPEAV ATPVPRTRCHAMHGNNYA DDDRAGG DIHNLDAPGQQ++HH+GG PAGIGDDV ASRD FGEQG GFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV DGRVL PSSL+HGPTAV LNVE+AVPVPTAEKAR NRVGALNLGGLP R PPVTRVAGVESEVGA GEASTRRTGPLA+MA DSMSAVRDIAHRAGAIAASR PGRES PGAP PLRTAKPDVHKEP EKTEDS +V DDH TS + G PSA R TT NAVR G QVE GTGAA+KAAR DQLEELENEHTKLFGDSLPLST+PDSFNRAIRRALP++LPPA+AVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEV GFGGG GKRRERGPETP SGGVDA XXX VDT+AGGP+GDS G VAPFAPP TV STERQGFFSKPRQQ PQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKE VESMR+ELERASDDSRR NRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLG+GNPSTQLSPA
Sbjct: 1 MTSLPKRIRPVPLPEAVLATPVPRTRCHAMHGNNYAV-DDDRAGGGDDIHNLDAPGQQQQHHYGGVPAGIGDDVYASRDTFGEQGVGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVGDGRVLGPSSLNHGPTAVHLNVESAVPVPTAEKARNNRVGALNLGGLPTRSPPVTRVAGVESEVGAGGEASTRRTGPLAQMARDSMSAVRDIAHRAGAIAASRTPGRESVPGAPWPLRTAKPDVHKEPSLEKTEDSRLIVRDDHSGTSFEGGAPSAERLTTANAVRFGKQVEHGTGAASKAARPDQLEELENEHTKLFGDSLPLSTMPDSFNRAIRRALPALLPPALAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVANQIVGLQLAHVCGWYPMDLGQEVAQVGFGGGXXXXXXXXXXXGKRRERGPETPLSAFQMFLGGSGGSGGVDAGXXXXXXXVDTKAGGPVGDSPGAVAPFAPPSTV---STERQGFFSKPRQQPPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEAECTRSWPFTKGGREKGKRDPPQVESMRSELERASDDSRRLTDKLCRLEEDNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGEGNPSTQLSPA 660
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 3274 |
Hectar predicted targeting category | chloroplast |
Gene id | Ec-28_001410.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=688bp MPLAFKFSAVASLNAALQLLVLLRCTSITVVDAFVALHPSAAVSEIVWSR HRTDTLRTSATPPPLSPRPSRSHMTSLPKRIRPVPLPEAVPATPVPRTRC HAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAAS RDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV VDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPR RPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIA ASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQ RGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGD SLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLV AVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGP ETPGSAFQMFLGGNGGSGGVDAGGSGHGGDVDTRAGGPMGDSSGGVAPFA PPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQ ELTVMKHSLQKEVESMRNELERASDDSRRLTDKLCRLEEDNRRLEAVVSR LGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA* back to topspliced messenger RNA >Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3274bp|location=Sequence derived from alignment at chr_28:1324922..1333355- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
GTGCGGCAAGACTTGCCACGTTCAAAATTGCCCACGATCTTCAAACGAAA CATTACATACGCACGAAGGGCGGCCCTTTTGCGCCTCTCGGCTACATAAG GGATCGCAAAATATTGCTGTATCTTCGTTGCCGTCGTGGCAGGATTTGCA CTATTAGTGTTCTCTCGTGGCTCTCTCTGTTCTCTCAAAAACACGCCGGA CTAGAGGGGACCGAGGAGCATGCCAACATGCCCCTTGCGTTCAAGTTCAG TGCGGTAGCATCCCTGAATGCCGCCCTCCAGCTGCTTGTGCTCCTTCGGT GTACTTCTATCACGGTCGTAGACGCGTTCGTGGCACTCCATCCGAGCGCT GCCGTCTCGGAAATCGTGTGGAGCCGTCATCGTACGGATACCCTGCGGAC GTCGGCCACACCTCCTCCCTTGAGTCCAAGACCGTCAAGATCCCACATGA CTTCACTCCCAAAGAGGATTAGACCAGTCCCTTTGCCTGAAGCTGTTCCT GCCACCCCAGTGCCTAGGACGCGATGCCACGCCATGCATGGCAACAACTA CGCCGCTCACGATGATGACCGTGCAGGTGGCAGGGCTGATATACACAACC TTGACGCGCCAGGTCAGCAGGAACGGCACCACTTTGGGGGCGCACCGGCA GGGATTGGTGACGATGTTGCTGCCAGCAGGGATATTTTTGGAGAACAAGG AGGAGGGTTCGGGTGGCTCAGAGAGTTTGGAAACGGAAAGACGGACATCG CCGGGCTGGTTCTTTCGACGGTGCTCCTGATGACGGCGGTGGGGGCACCA CTAGGGGCCGCCGCGGACCTGGGAGTCGTGGACGGCCGTGTGCTCGACCC GTCCTCGCTCAGTCATGGACCGACCGCCGTGCGCTTGAACGTTGAGAACG CGGTGCCAGTGCCCACAGCGGAGAAGGCAAGAGCTAATCGTGTCGGCGCC TTGAACCTCGGGGGTCTGCCGCCGAGACGCCCGCCGGTGACTCGCGTTGC TGGTGTCGAAAGCGAGGTCGGGGCAGTCGGCGAGGCGTCGACACGGAGAA CGGGGCCTCTGGCGAAGATGGCGGGAGATTCGATGTCGGCGGTGCGCGAC ATCGCGCACAGGGCGGGAGCGATCGCGGCCTCGCGAGGGCCCGGAAGGGA AAGTGCCCCCGGTGCTCCCGGGCCCCTCCGTACGGCGAAACCAGACGTCC ATAAAGAACCACCCCCCGAAAAGACGGAAGACTCGGGATCTGTCGTAGGC GATGACCATCCTCACACGTCTCTTCAGAGAGGGGTTCCCTCCGCCGGAAG GTCGACAACCGTCAATGCCGTCCGGTCCGGGGGGCAAGTCGAGGACGGAA CTGGGGCGGCTGCTAAGGCTGCTCGTTCGGACCAACTTGAGGAGCTGGAA AACGAGCACACCAAGCTGTTCGGAGATTCCCTGCCGCTATCCACCTTGCC CGACAGCTTCAATCGCGCCATCAGGAGAGCACTCCCGTCCGTGCTCCCGC CGGCGATGGCCGTGTTCCTCACGGTGTCCATGCCGGCCGTGATACTGCTG CTGAAAGGAGTAGGCACTACGCTGGTGGCTGTCGCGAAAGGATACGGGAA GGCAGACCGGCGGCGCTCAGACGACGGGCACGACGTTGGTTCCGCTCTGG AGGTCGGCTTCGGCGGTGGTGGCGGTGTTTTTGGTGGTAGTGTTGGCGGC GAAGGAAAACGCCGTGAACGCGGACCGGAAACCCCTGGTTCGGCCTTCCA AATGTTTCTCGGAGGGAATGGCGGCAGTGGTGGCGTTGATGCGGGCGGAA GCGGACACGGTGGTGATGTAGATACCAGGGCGGGCGGTCCTATGGGGGAC AGCTCCGGGGGAGTCGCGCCGTTCGCGCCTCCTTTGACGGTGCAGCAGGT GAGCACGGAGAGACAGGGGTTCTTCTCCAAGCCGAGGCAGCAGCACCCGC AGTTAAAAGACACCGGTGGTGGGTTCGCGGTGGGAGACGACGCGATGGCA GCAATGGCGATGGCGGCAATGACTCAGGAACTGACAGTCATGAAGCACTC ACTACAAAAAGAGGTTGAATCCATGAGAAACGAGCTCGAGCGCGCGAGTG ACGACTCGAGGCGCCTCACCGACAAGCTTTGCCGCCTAGAGGAAGACAAC CGACGGCTTGAAGCTGTGGTATCACGCTTGGGGGGGCAAGATGCTCGGCG CCTCAAAGCCCAGTTATTTTCGCTGCTAGCTTCGCCTTCGATGGGACAGC TTGGACAAGGCAACCCCTCGACCCAGCTGAGCCCAGCCTGAGAAACTGGA GGACGAGAAATTATTCGTACATTATTACCTGGTTGGCAGTACGTTGTAGT GAGCATGCGGGAGCCTGCATGTTTCAGTCATCCTCGAGAGCACCCTGCTG TATGGTGGAAGTTGGCGCAGCAACTTGTTGTACACTTCAAGGTTCATGTC GATTTAGTGTTCGCATACCAGCCCGTTCTCTGGGTTCGCATATTCTCTCT GTACCCAGGGAACACACTTGCTTGTGGTGCGCGTGGAAGTTACTGTTTGC ACTGATTTCAGAACAGGCATCGCGTGTGGTTCATGGAAGTGCCTGCTAAA TTTGCGCGATCCTTGGTCGAAGACGAAAGTCCAAGAAAAACGCTAAAAAA GCTGTGCTAATCTCTTTGCCTTGCGGAAGGCCCAAGGAAGGGGAGGGCGA AGGTAGCGAGCAGAAAGAAGCGCGAGCGAGAATTCGTCTAGGAAAGACAG CGACAAAGAAACACGCACCCACACAACTCAGCGAGAAAGCGGCTGGCCCG CAGGCCAAGTCAAGGTCAACGAACACACGACCGGTTGCAACAGTCGCTAC GGTGGGGTATTCTTGCTTCGCCGCACTCAAGCTGCGTTCATGCCGCCGCG CGCAGCTGTGGAAGGACGACAAAACCTCGATACACTACACACGTTGCAGA ATGGAGGTCGAATCTAAAGCCCTTAAAGCTACTTTGGGGATCGATAGATT CATGGAGAGAAAAACGACGGGTGCAGCCAATAGAGGGAATTCCGCCACCC GAGAACGGAATGCACACGTCGGATAGTCGGGGCTTGGATGGGATGGGAAC TTGTTATCACCTTTCACGGAACGCGAGCAATGAAACCACAGTAAAGAGTC CATGGCAAGGCAACAACGCAGCAGCCAACTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNN back to topprotein sequence of Ec-28_001410.1 >Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=688bp
MPLAFKFSAVASLNAALQLLVLLRCTSITVVDAFVALHPSAAVSEIVWSR HRTDTLRTSATPPPLSPRPSRSHMTSLPKRIRPVPLPEAVPATPVPRTRC HAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAAS RDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV VDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPR RPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIA ASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQ RGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGD SLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLV AVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGP ETPGSAFQMFLGGNGGSGGVDAGGSGHGGDVDTRAGGPMGDSSGGVAPFA PPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQ ELTVMKHSLQKEVESMRNELERASDDSRRLTDKLCRLEEDNRRLEAVVSR LGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA* back to topmRNA from alignment at chr_28:1324922..1333355- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=8434bp|location=Sequence derived from alignment at chr_28:1324922..1333355- (Ectocarpus species7 Ec32 male_plus_femaleSDR) GTGCGGCAAGACTTGCCACGTTCAAAATTGCCCACGATCTTCAAACGAAA
CATTACATACGCACGAAGGGCGGCCCTTTTGCGCCTCTCGGCTACATAAG
GGATCGCAAAATATTGCTGTATCTTCGTTGCCGTCGTGGCAGGATTTGCA
CTATTAGTGTTCTCTCGTGGCTCTCTCTGTTCTCTCAAAAACACGCCGGA
CTAGAGGGGACCGAGGAGCATGCCAACATGCCCCTTGCGTTCAAGTTCAG
TGCGGTAGCATCCCTGAATGCCGCCCTCCAGCTGCTTGTGCTCCTTCGGT
GTACTTCTATCACGGTCGTAGACGCGTTCGTGGCACTCCATCCGAGCGCT
GCCGTCTCGGAAATCGTGTGGAGCCGTCATCGTACGGATACCCTGCGGAC
GTCGGCCACACCTCCTCCCTTGAGTCCAAGACCGTCAAGATCCCACATGA
CTTCACTCCCAAAGAGGATTAGACCAGTCCCTTTGCCTGAAGCTGTTCCT
GCCACCCCAGTGCCTAGGACGCGATGCCACGCCATGCATGGCAACAACTA
CGCCGCTCACGATGATGACCGTGCAGGTGGCAGGGCTGATATACACAACC
TTGACGCGCCAGGTCAGCAGGAACGGCACCACTTTGGGGGCGCACCGGCA
GGGATTGGTGACGATGTTGCTGCCAGCAGGGATATTTTTGGAGAACAAGG
AGGAGGGTTCGGGTGGCTCAGAGAGTTTGGAAACGGAAAGACGGACATCG
CCGGGCTGGTTCTTTCGACGGTGCTCCTGATGACGGCGGTGGGGGCACCA
CTAGGGTAAGCAAAACACTCGAAATGTGGGGTATTCCACGAGGGTCAGAT
TCGCAGATCGTTGCTCTGCAGTACATCTACTGTAGACGGGAAATCTCCGA
GCATGTTGCATCACTTGCTGTCGCTTTGTTGGAGAAACCACAGCGAAGTC
GAACCGAATACATCCACCAGGACAGCAATCTTGACTACCTTTTCCAGAGG
TTATGTGTAACGAAAACTACAGTATACTTCTATTCCATGCGATGATGGTA
CTACTGTATAGGTCTACAGTAGATCGCTCATGCTTCCCTGTCACCCCCGG
GCGAACAGCCACTCACTCATAAGTCAAGGGCAAATGGTTTGTAAGAACCG
GAAGGCCAAAATCTGAGGAAACTTGTGGAGCACCGAGGACGAACAGCTGT
GGCGTCATCGGGCTCACGATGCTCTCGGGATAGAGGAACCCCTCAAGTTT
TTATCTATAGCCGCGGGTGACACCTTGAGGTGCTTATGCTCTCCAGCAAA
TACCATTTTCAGGCGCACCATGCTTCATATCCACAGAAAAAAAAGTCCTG
CGATGCAGCCCATTTTCCGTCCACCACTAGCACGGTGTCATCGGTGCGCC
CCTGATTCTGGCAACTTCCCCTCTCCACCCGATCGGCACTTTCAGGGCCG
CCGCGGACCTGGGAGTCGTGGACGGCCGTGTGCTCGACCCGTCCTCGCTC
AGTCATGGACCGACCGCCGTGCGCTTGAACGTTGAGAACGCGGTGCCAGT
GCCCACAGCGGAGAAGGCAAGAGCTAATCGTGTCGGCGCCTTGAACCTCG
GGGGTCTGCCGCCGAGACGCCCGCCGGTGACTCGCGTTGCTGGTGTCGAA
AGCGAGGTCGGGGCAGTCGGCGAGGTGAGTCGGGTTGACGTTCACCAATG
CCCCGCGATTCGCCTGATGCGTCGAGGCAGAGAGCATGTGCGCCAACAAG
TAATCGTCCAAAAAGAACATCCTCTTTTTTCGTCACGTCGGAATGAGTGT
GGAGAGAGACTTGCTGCTGGTTTGCGCGTCACCCATCGCAAGCGTAGACA
CCCCGATCCTCAACGAAACTCGCAGGCGTCGACACGGAGAACGGGGCCTC
TGGCGAAGATGGCGGGAGATTCGATGTCGGCGGTGCGCGACATCGCGCAC
AGGGCGGGAGCGATCGCGGCCTCGCGAGGGCCCGGAAGGGAAAGGTACAG
TCATTCATAACACCCAACATTCTGCATTTTATTATCTAGAGTGCAGGAGG
TTGGGAAGTTCGAGTCGTAAGCCGCAGAAAAAATAGGGCCAGGCGGTTTG
TAGTAAAGCCCACGCGATTCGCACGTGTACTTATGTGCTCCGCGTGCCCC
AAGCATTGAAGTACAATGTTTTGAGAGATACATGCACCGCATATCGTGTA
CAACCACATCATTCTGGATCGAGTTTTGAACCTTGATTTTGCCGCAGGAG
GAAAAGGTGTGCAAGTCGAATGGACGGCGCAGAATGGTCAAACAGAGCAT
TACAGAAGCCATCTTGCGCTTTGTCTAATCCGTCCGTTATCGAGATCGAG
ATCCCGAGCTTCGATTGTCGACCCCTAGTATTCATAGTCGTGCATGCTGT
AGTCGTTAGACCGTTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACG
CCGGGTTCGCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGT
GAGGTATTCGGCGAGTCGCATGAAGGGTGCGGTGCATCCTGCTAAGTGTG
TTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGCGTATGA
CTTAATTTATTTTCTGGTGCTTTCACTTCTAGAGACAATTGTAAGCACTG
TGTAACTGCCTCTATGGTGCTTGACTATTATAACACAACGTGGAGCGATC
ATCCCCTTTGTGCGGAGTGAGGGTTCTCGACCCCGCACAACATAATCTAC
TCGACCACCATTCATGGTTACCGCAAAAAAAAAAATGCACAAAATAAGCG
GTAACCTGGTTGCCGAGCTCACGCGGTGATCGGCTTGTTTTACAACATCG
CTGCCAAGCGATGAAAACCCAACCCCGATGGCAAACACCGGGGGGGGCGG
CTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCGATGGCA
AACACCCGGGGGGGGATTGTCGACCCCTAGGGGGGTGACATTTCACGCGT
AGCAAACGGCATGAAACAGTTCTTGTTACAGACAAGCACAACATCATGGT
CAACCATTAACAGCCACCCACTGCAGTTGTGGCAACCACGAAGAAGCAGC
AGCAGCAGCAGTAGCATCAGCAAACACCTGCCCCAATCATGCCTGCCGGA
CATCGGCCGTAACTTGCAGTGCCCCCGGTGCTCCCGGGCCCCTCCGTACG
GCGAAACCAGACGTCCATAAAGAACCACCCCCCGAAAAGACGGAAGACTC
GGGATCTGTCGTAGGCGATGACCATCCTCACACGTCTCTTCAGAGAGGGG
TTCCCTCCGCCGGAAGGTCGACAACCGTCAATGCCGTCCGGTCCGGGGGG
CAAGTCGAGGACGGAACTGGGGCGGCTGCTAAGGCTGCTCGTTCGGACCA
ACTTGAGGAGCTGGAAGTGAGTCCCATGTCCTTTTTTCGTTTGTCACAAA
CCGAGTTGCAGTTTGCACCGGCTGCAAACTTGTCACCTTACACCCCATAG
TGGCACCAATTGCAGATTGCCGCGGCTGCAAAATTTTCGCCAGTAGCTCA
TTTGTGTCACGACTTGTGGCGGTCTGTTCTTGTATATCTTTCATGATTCT
GTGAATGTTGAATCGAAGCAGTGCAAAGAAAGGTCAACCGTCGAGGCTTT
ACGACAGACATTTTCAGGGGAGTGTTGTCTGTGGCTGCCCATGTAAGGGA
AGCCGATAGCTCGGGGAAGCCACAAGAATAGTCGGAGCCCATCACCTACA
TGAACAAACGCGTGCGCTTCCTCTTCGCCCTCGGTACATCTTGAACTAGT
CCGAACCTCAACCAGCCCCGCCCCCTTCGCCCCCCCCCCTCCCGTGTGTG
GGTCTGCCAGGAACTTCCCGAACTGACCCTTTCAACCCGTGTCACACCCG
TTTCTTCGCTTCTCGAGAAAGGATACGATAGCACATATTTTCCATGTCGC
TAGTGCCACATACTCCGGAGCTCCCAATGAGCACACTTTCTAACCCCGCG
GCGCGCGCATGGTTCGACCAACAGAACGAGCACACCAAGCTGTTCGGAGA
TTCCCTGCCGCTATCCACCTTGCCCGACAGCTTCAATCGCGCCATCAGGA
GAGCACTCCCGTCCGTGCTCCCGCCGGCGATGGCCGTGTTCCTCACGGTG
TCCATGCCGGCCGTGATACTGCTGCTGAAAGGAGTAGGTAGGTGCGGGCG
ATAGTGTGTGCTCTGTAAAGGCAGCGGTTGCTGGCTGACCGGGCCGCGTT
CAATTTTCCTAGTTCACGAGGCACACCCCTCGCCCTTCGAGTTTTTTTGG
CGCGTGGCTATCGGTGTGCCTACAAAATCAACCGCACTAGTCTACAGTAA
TCTCCATCATGGCCGATTAATGTCCGCCACCGCTTCTTTTTGGACAAGGG
TGTAGTAGATGGAACAGCAGTGACGGCGCGCCGCATGAACGCTTGCCACA
CGCTGGATCGACATGTCTCGTTTTGTTTCGGAAGCTTTTGACGGTCGCCT
TGAAGACCAAGAACCCATCTTGGCACTGCTTTGTACCAACACGTTGGAGG
CAGAGGTTCAACCCAATGCACATGTTTTTTTGGAAAAACGCCTCAGGCAC
TACGCTGGTGGCTGTCGCGAAAGGATACGGGAAGGCAGACCGGCGGCGCT
CAGACGACGGGCACGACGTTGGTTCCGCTCTGGAGGTAACTAGCCAAAGA
TCCGGCTTACAACAATTGCGCATGTGTGTGCTTGGTACCCGATGGATCTT
GGGCAAGTTGTCCAAGTAAGTACCCTTGGCAACAACATGGTCTTCCTCGA
AAACTCGATCTATGGCCTGTGTGGAGACCACCTTCATAAAGAAGGGTACA
ATCTCCCCAACGCCTGTCGAGGACGATTCCCTCTTTTCACACCTGGTCAT
ATTTAAATACCCGGTGCCGAGCACGTGGACCGCCAGCTGGCTGGGAAATT
CAACGATTGTGTTTTTTTAAATCTCGCTCGGGTAGCGACTCACCGCTTGC
CTTCCAAGCGCTAAGTTTGCCGACGTTCGCGTAACGTCATCCTCACGACA
TGACAGCAGTATCAACCACGATGTATCGATCATGATTGATTTTGTCAGGT
CGGCTTCGGCGGTGGTGGCGGTGTTTTTGGTGGTAGTGTTGGCGGCGAAG
GAAAACGCCGTGAACGCGGACCGGAAACCCCTGGTTCGGCCTTCCAAATG
TTTCTCGGAGGGAATGGCGGCAGTGGTGGCGTTGATGCGGGCGGAAGCGG
ACACGGTGGTGATGTAGATACCAGGGCGGGCGGTCCTATGGGGGACAGCT
CCGGGGGAGTCGCGCCGTTCGCGCCTCCTTTGACGGTGAGGGGACTTGCG
GTGTTTTGCTACGGTCATGTCGAGGAGGCTTGCACGGCTGTCGCCGTACA
AACTTGTGGTGGCGTATGTGCCTTCGCCAAACAACTGAAAAAAAAAACAC
GTTGAGGTTTGATTTTCGTGTCGCGGAAAAGCTTAAAAAGCACATGCCCT
CCGTGTTCTTCAGCGTAATACCCCCATTCAGGGTAGGGGTGCGAATTCTT
GTCGTGTTTTTCGAGCAGGCATCGCCAGAACCTCTTAAGGTCGACTCGAC
TGCAAGGGTATTGCTTGGAGACCGCTTGCCCAACTCTATGAACAGCTTTG
GAAACGATTTCACTGGCACCCCGTTACTCCTTCGAATCAAAACCAAGAGT
GCCCTCCAGTTCAACGTTGTCCAAATATACCTTTCGGGAAATTCCATCCC
GACGAAATTTAATCTCAAATATCGCGGTGCGAAACGGATTTTCTCTCTCA
GTGAAGCGTGTTGTAGCAACCTGATTTTCACCAGTATCTTGACCAACACA
CCCGGTGATGCGCGAGCACCTCTAGGTGCAGCAGGTGAGCACGGAGAGAC
AGGGGTTCTTCTCCAAGCCGAGGCAGCAGCACCCGCAGTTAAAAGACACC
GGTGGTGGGTTCGCGGTGGGAGACGACGCGATGGCAGCAATGGCGATGGC
GGCAATGACTCAGGAACTGACAGTCATGAAGCACTCACTACAAAAAGAGG
TGAGATTGTTGTCGTTTGTTCGAAGACTGCCGGTTTTTCGACTGCCGGCT
TCATCACATCATTGTCGGTGGGGTCGTGCAATTGTCAGAGGTTTGGGACA
ACCCTGATGTAGGCAGAATGCAGCAGGAGCTGGCCTTGCACAAAATGGGG
GAGGTAAAAGGGAAATCGGGACCCCCCCAGGTGTCCTTTCGATTCGGTGT
TTTCCTCCTTTTCGCTTCAAACGAAACTTGTCTGAGAACTGTGGGTTTAT
GGTCTTTTTCCCGCTTCGAACATTATGTCCCTGTCCTCTTGCTCGCGGTG
TCACAAGTGGTCCGACGCTGAAAGTTATTACGAAGGGAAGAGTGCGCACG
ACACATGGAAGGAGCCGTACTTCGAGGAGGTAGATAGGCGGGTGGTTTTT
CGGTGCTCGCGCCGTGTAGGCCATCTGGTGCGATCGAAACCAATCGCTGA
AGCCATAGTCTTGCGTACATGCAGTATGTTGTCATCTGGCCTTTATTATG
ATTGTTGTGCTGGCGACGAGAGGCGCCAGTTTTAACTTCTCTCGGGAAGC
AAGTGTCGGCAACATTCAAGATGCGTCGACCTCAAAGGAGACCGAAGTAG
ACTACTTGCTTTGAGAATCCCCACATTTTCTCGACGGCCAATGAAAAACA
AACCGGCTTGAGTTGACCTTCGCCCCGATCCTGACCCTGCTGGAGCTGGA
AAAAGTAACGGCTCTTTCCTTCTAGAGGGTGAAAAGTGTTTTCGTTGGGC
GAAAGCCCCGAGCTCACTACTGTAGTGTATGGATAAATGCCAATAATCGA
ATCGATTGCGTGAAGACCGAGTGAAAAAGACTGCAGATTGAGCGGAATGC
CTTAAGGTTTCCAACGATGCCATCTTGCAGGTTGAATCCATGAGAAACGA
GCTCGAGCGCGCGAGTGACGACTCGAGGCGCCTCACCGACAAGCTTTGCC
GCCTAGAGGAAGACAACCGACGGCTTGAAGCTGTGGTATCACGCTTGGGG
GGGCAAGATGCTCGGCGCCTCAAAGCCCAGGTATTGTTACGTATGTAAAT
TCCGACAGCGGAACCTCTTTGCTTGATCGGCCCGTCGCACAGTATCCTCA
GGACATCCCCAACAGCATGCTCCCACGTCCTTCGCGCCTCGGTGAATGGT
CGGGAGCCCCGTTCCGGTCGTCTTGCCACAGAAAAAACTTCCCCCACATA
TTGAAATCCGTATTTGGATTGACGACCACCAGGGAGCTTAGTCTCTCTCA
CTTCCTTAACCCTGCCTTACCACGCCCCCGCCTTTGCCTGCCGTCTTTCG
TTTTGCCCCGCCTCGAACAACAGTTATTTTCGCTGCTAGCTTCGCCTTCG
ATGGGACAGCTTGGACAAGGCAACCCCTCGACCCAGCTGAGCCCAGCCTG
AGAAACTGGAGGACGAGAAATTATTCGTACATTATTACCTGGTTGGCAGT
ACGTTGTAGTGAGCATGCGGGAGCCTGCATGTTTCAGTCATCCTCGAGAG
CACCCTGCTGTATGGTGGAAGTTGGCGCAGCAACTTGTTGTACACTTCAA
GGTTCATGTCGATTTAGTGTTCGCATACCAGCCCGTTCTCTGGGTTCGCA
TATTCTCTCTGTACCCAGGGAACACACTTGCTTGTGGTGCGCGTGGAAGT
TACTGTTTGCACTGATTTCAGAACAGGCATCGCGTGTGGTTCATGGAAGT
GCCTGCTAAATTTGCGCGATCCTTGGTCGAAGACGAAAGTCCAAGAAAAA
CGCTAAAAAAGCTGTGCTAATCTCTTTGCCTTGCGGAAGGCCCAAGGAAG
GGGAGGGCGAAGGTAGCGAGCAGAAAGAAGCGCGAGCGAGAATTCGTCTA
GGAAAGACAGCGACAAAGAAACACGCACCCACACAACTCAGCGAGAAAGC
GGCTGGCCCGCAGGCCAAGTCAAGGTCAACGAACACACGACCGGTTGCAA
CAGTCGCTACGGTGGGGTATTCTTGCTTCGCCGCACTCAAGCTGCGTTCA
TGCCGCCGCGCGCAGCTGTGGAAGGACGACAAAACCTCGATACACTACAC
ACGTTGCAGAATGGAGGTCGAATCTAAAGCCCTTAAAGCTACTTTGGGGA
TCGATAGATTCATGGAGAGAAAAACGACGGGTGCAGCCAATAGAGGGAAT
TCCGCCACCCGAGAACGGAATGCACACGTCGGATAGTCGGGGCTTGGATG
GGATGGGAACTTGTTATCACCTTTCACGGAACGCGAGCAATGAAACCACA
GTAAAGAGTCCATGGCAAGGCAACAACGCAGCAGCCAACTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN back to topCoding sequence (CDS) from alignment at chr_28:1324922..1333355- >Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2064bp|location=Sequence derived from alignment at chr_28:1324922..1333355- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGCCCCTTGCGTTCAAGTTCAGTGCGGTAGCATCCCTGAATGCCGCCCT CCAGCTGCTTGTGCTCCTTCGGTGTACTTCTATCACGGTCGTAGACGCGT TCGTGGCACTCCATCCGAGCGCTGCCGTCTCGGAAATCGTGTGGAGCCGT CATCGTACGGATACCCTGCGGACGTCGGCCACACCTCCTCCCTTGAGTCC AAGACCGTCAAGATCCCACATGACTTCACTCCCAAAGAGGATTAGACCAG TCCCTTTGCCTGAAGCTGTTCCTGCCACCCCAGTGCCTAGGACGCGATGC CACGCCATGCATGGCAACAACTACGCCGCTCACGATGATGACCGTGCAGG TGGCAGGGCTGATATACACAACCTTGACGCGCCAGGTCAGCAGGAACGGC ACCACTTTGGGGGCGCACCGGCAGGGATTGGTGACGATGTTGCTGCCAGC AGGGATATTTTTGGAGAACAAGGAGGAGGGTTCGGGTGGCTCAGAGAGTT TGGAAACGGAAAGACGGACATCGCCGGGCTGGTTCTTTCGACGGTGCTCC TGATGACGGCGGTGGGGGCACCACTAGGGGCCGCCGCGGACCTGGGAGTC GTGGACGGCCGTGTGCTCGACCCGTCCTCGCTCAGTCATGGACCGACCGC CGTGCGCTTGAACGTTGAGAACGCGGTGCCAGTGCCCACAGCGGAGAAGG CAAGAGCTAATCGTGTCGGCGCCTTGAACCTCGGGGGTCTGCCGCCGAGA CGCCCGCCGGTGACTCGCGTTGCTGGTGTCGAAAGCGAGGTCGGGGCAGT CGGCGAGGCGTCGACACGGAGAACGGGGCCTCTGGCGAAGATGGCGGGAG ATTCGATGTCGGCGGTGCGCGACATCGCGCACAGGGCGGGAGCGATCGCG GCCTCGCGAGGGCCCGGAAGGGAAAGTGCCCCCGGTGCTCCCGGGCCCCT CCGTACGGCGAAACCAGACGTCCATAAAGAACCACCCCCCGAAAAGACGG AAGACTCGGGATCTGTCGTAGGCGATGACCATCCTCACACGTCTCTTCAG AGAGGGGTTCCCTCCGCCGGAAGGTCGACAACCGTCAATGCCGTCCGGTC CGGGGGGCAAGTCGAGGACGGAACTGGGGCGGCTGCTAAGGCTGCTCGTT CGGACCAACTTGAGGAGCTGGAAAACGAGCACACCAAGCTGTTCGGAGAT TCCCTGCCGCTATCCACCTTGCCCGACAGCTTCAATCGCGCCATCAGGAG AGCACTCCCGTCCGTGCTCCCGCCGGCGATGGCCGTGTTCCTCACGGTGT CCATGCCGGCCGTGATACTGCTGCTGAAAGGAGTAGGCACTACGCTGGTG GCTGTCGCGAAAGGATACGGGAAGGCAGACCGGCGGCGCTCAGACGACGG GCACGACGTTGGTTCCGCTCTGGAGGTCGGCTTCGGCGGTGGTGGCGGTG TTTTTGGTGGTAGTGTTGGCGGCGAAGGAAAACGCCGTGAACGCGGACCG GAAACCCCTGGTTCGGCCTTCCAAATGTTTCTCGGAGGGAATGGCGGCAG TGGTGGCGTTGATGCGGGCGGAAGCGGACACGGTGGTGATGTAGATACCA GGGCGGGCGGTCCTATGGGGGACAGCTCCGGGGGAGTCGCGCCGTTCGCG CCTCCTTTGACGGTGCAGCAGGTGAGCACGGAGAGACAGGGGTTCTTCTC CAAGCCGAGGCAGCAGCACCCGCAGTTAAAAGACACCGGTGGTGGGTTCG CGGTGGGAGACGACGCGATGGCAGCAATGGCGATGGCGGCAATGACTCAG GAACTGACAGTCATGAAGCACTCACTACAAAAAGAGGTTGAATCCATGAG AAACGAGCTCGAGCGCGCGAGTGACGACTCGAGGCGCCTCACCGACAAGC TTTGCCGCCTAGAGGAAGACAACCGACGGCTTGAAGCTGTGGTATCACGC TTGGGGGGGCAAGATGCTCGGCGCCTCAAAGCCCAGTTATTTTCGCTGCT AGCTTCGCCTTCGATGGGACAGCTTGGACAAGGCAACCCCTCGACCCAGC TGAGCCCAGCCTGA back to top
Synonyms
The feature 'Ec-28_001410.1' has the following synonyms
Synonym |
Esi0181_0053 |
Esi_0181_0053 |
|