Ec-28_001410.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_001410.1
Unique Name	Ec-28_001410.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	688

Homology

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BLAST of Ec-28_001410.1 vs. uniprot
Match: D8LGV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV8_ECTSI)

HSP 1 Score: 1095 bits (2832), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0

Query:   74 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 687
            MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA
Sbjct:    1 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 614

[Close]

BLAST of Ec-28_001410.1 vs. uniprot
Match: A0A6H5L0M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M1_9PHAE)

HSP 1 Score: 886 bits (2289), Expect = 0.000e+0
Identity = 513/664 (77.26%), Postives = 530/664 (79.82%), Query Frame = 0

Query:   74 MTSLPKRIRPVPLPEAVPATPVPRTRCHAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAASRDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVVDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPRRPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIAASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQRGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGDSLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEV---------------------------GFGGGGGVFGGSVGGEGKRRERGPETPXXXXXXXXXXXXXSGGVDAXXXXHGGDVDTRAGGPMGDSSGGVAPFAPPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKE-----------------------VESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA 687
            MTSLPKRIRPVPLPEAV ATPVPRTRCHAMHGNNYA  DDDRAGG  DIHNLDAPGQQ++HH+GG PAGIGDDV ASRD FGEQG GFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV DGRVL PSSL+HGPTAV LNVE+AVPVPTAEKAR NRVGALNLGGLP R PPVTRVAGVESEVGA GEASTRRTGPLA+MA DSMSAVRDIAHRAGAIAASR PGRES PGAP PLRTAKPDVHKEP  EKTEDS  +V DDH  TS + G PSA R TT NAVR G QVE GTGAA+KAAR DQLEELENEHTKLFGDSLPLST+PDSFNRAIRRALP++LPPA+AVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEV                           GFGGG           GKRRERGPETP             SGGVDA XXX    VDT+AGGP+GDS G VAPFAPP TV   STERQGFFSKPRQQ PQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKE                       VESMR+ELERASDDSRR           NRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLG+GNPSTQLSPA
Sbjct:    1 MTSLPKRIRPVPLPEAVLATPVPRTRCHAMHGNNYAV-DDDRAGGGDDIHNLDAPGQQQQHHYGGVPAGIGDDVYASRDTFGEQGVGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGVGDGRVLGPSSLNHGPTAVHLNVESAVPVPTAEKARNNRVGALNLGGLPTRSPPVTRVAGVESEVGAGGEASTRRTGPLAQMARDSMSAVRDIAHRAGAIAASRTPGRESVPGAPWPLRTAKPDVHKEPSLEKTEDSRLIVRDDHSGTSFEGGAPSAERLTTANAVRFGKQVEHGTGAASKAARPDQLEELENEHTKLFGDSLPLSTMPDSFNRAIRRALPALLPPALAVFLTVSMPAVILLLKGVGTTLVAVAKGYGKADRRRSDDGHDVGSALEVANQIVGLQLAHVCGWYPMDLGQEVAQVGFGGGXXXXXXXXXXXGKRRERGPETPLSAFQMFLGGSGGSGGVDAGXXXXXXXVDTKAGGPVGDSPGAVAPFAPPSTV---STERQGFFSKPRQQPPQLKDTGGGFAVGDDAMAAMAMAAMTQELTVMKHSLQKEAECTRSWPFTKGGREKGKRDPPQVESMRSELERASDDSRRLTDKLCRLEEDNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGEGNPSTQLSPA 660

The following BLAST results are available for this feature:

BLAST of Ec-28_001410.1 vs. uniprot

BLAST of Ec-28_001410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LGV8_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0M1_9PHAE	0.000e+0	77.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 599..633
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 454..687
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 426..453
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..33
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..425
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..33 score: 0.664

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:1325905..1333128 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_001410.1	Ec-28_001410.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 1324922..1333355 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_001410.1 ID=Ec-28_001410.1|Name=Ec-28_001410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=688bp
MPLAFKFSAVASLNAALQLLVLLRCTSITVVDAFVALHPSAAVSEIVWSR
HRTDTLRTSATPPPLSPRPSRSHMTSLPKRIRPVPLPEAVPATPVPRTRC
HAMHGNNYAAHDDDRAGGRADIHNLDAPGQQERHHFGGAPAGIGDDVAAS
RDIFGEQGGGFGWLREFGNGKTDIAGLVLSTVLLMTAVGAPLGAAADLGV
VDGRVLDPSSLSHGPTAVRLNVENAVPVPTAEKARANRVGALNLGGLPPR
RPPVTRVAGVESEVGAVGEASTRRTGPLAKMAGDSMSAVRDIAHRAGAIA
ASRGPGRESAPGAPGPLRTAKPDVHKEPPPEKTEDSGSVVGDDHPHTSLQ
RGVPSAGRSTTVNAVRSGGQVEDGTGAAAKAARSDQLEELENEHTKLFGD
SLPLSTLPDSFNRAIRRALPSVLPPAMAVFLTVSMPAVILLLKGVGTTLV
AVAKGYGKADRRRSDDGHDVGSALEVGFGGGGGVFGGSVGGEGKRRERGP
ETPGSAFQMFLGGNGGSGGVDAGGSGHGGDVDTRAGGPMGDSSGGVAPFA
PPLTVQQVSTERQGFFSKPRQQHPQLKDTGGGFAVGDDAMAAMAMAAMTQ
ELTVMKHSLQKEVESMRNELERASDDSRRLTDKLCRLEEDNRRLEAVVSR
LGGQDARRLKAQLFSLLASPSMGQLGQGNPSTQLSPA*