Ec-00_002000.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002000.1
Unique NameEc-00_002000.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length460
Homology
BLAST of Ec-00_002000.1 vs. uniprot
Match: A0A6H5KR97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR97_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 5.990e-110
Identity = 209/268 (77.99%), Postives = 213/268 (79.48%), Query Frame = 1
Query:    1 MDYCHVDEGSEAQNIIRQAEAPPDSPFRPRFRRRSGEIAIPAGFATAGAAGGTIGPPXXXXXXXSGTGSSKSDVQRIKLGVLLGKRPVADALSRFLTLRDVFKMGASCRQLMRMLLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAGPLLVHIRGSKEFLSYFRALEQNAAWTQQRMMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN 804
            MD  H D+GSEAQNIIRQAEAPPDSPFRPRFRRRSGEIAIPAGF T  A  GTIGPP        GTGSSKSDVQRIKLGVLLGKRPVADALSRFLTLRDVFKMGASCRQL+RMLL VG                                  XXXXXXXXXXXXXX    GAPAGPLLVHIRGSKEFL+YFRALEQNAAWTQQRMMAVSIVLDYHDSIDGPIP+FLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN
Sbjct:    1 MDNWHADDGSEAQNIIRQAEAPPDSPFRPRFRRRSGEIAIPAGFPTGAA--GTIGPPTTEGGGSGGTGSSKSDVQRIKLGVLLGKRPVADALSRFLTLRDVFKMGASCRQLVRMLLTVGGGAGAAGEPQQLGAAAVGVVKGSNGGGAAAEVGTXXXXXXXXXXXXXX----GAPAGPLLVHIRGSKEFLTYFRALEQNAAWTQQRMMAVSIVLDYHDSIDGPIPAFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN 262          
BLAST of Ec-00_002000.1 vs. uniprot
Match: D8LEE5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEE5_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 3.400e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1
Query:  616 MMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN 804
            MMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN
Sbjct:    1 MMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSIPENLGTLPNLRKLYLAGN 63          
BLAST of Ec-00_002000.1 vs. uniprot
Match: A0A836CHX9_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.360e-11
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 1
Query:  517 APAGPLLVHIRGSKEFLSYFRALEQNAAWTQQRMMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSN 735
            A   PL  HIRG  EF+++FRA E   AW   R+  +SI+LDY DS+ GPIP F+G    V ++ WLDLGRS+
Sbjct:   25 AAGSPLTPHIRGRNEFVAFFRAREVGIAWATDRIQPLSIILDYRDSLAGPIPQFIGQ---VKSLVWLDLGRSD 94          
The following BLAST results are available for this feature:
BLAST of Ec-00_002000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KR97_9PHAE5.990e-11077.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEE5_ECTSI3.400e-30100.00Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A836CHX9_9STRA1.360e-1150.68Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2217787..2229411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.6
Seed ortholog evalue1.9e-27
Seed eggNOG ortholog2880.D8LEE5
Preferred nameSLITRK4
Length2772
Hectar predicted targeting categoryother localisation
Gene idEc-00_002000.1
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs28IKV@1,2QQXQ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002000Ec-00_002000Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2217787..2229411 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002000.1Ec-00_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2217787..2228019 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002000.1.1Ec-00_002000.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2217787..2218313 +
Ec-00_002000.1.2Ec-00_002000.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2224057..2224120 +
Ec-00_002000.1.3Ec-00_002000.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2224587..2224777 +
Ec-00_002000.1.4Ec-00_002000.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2225320..2225472 +
Ec-00_002000.1.5Ec-00_002000.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2226266..2226360 +
Ec-00_002000.1.6Ec-00_002000.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2226617..2226729 +
Ec-00_002000.1.7Ec-00_002000.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2227111..2227285 +
Ec-00_002000.1.8Ec-00_002000.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2227958..2229411 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002000.1CDS:Ec-00_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2217787..2218313 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0020003UTR:Ec-00_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 2228020..2229411 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002000.1 ID=Ec-00_002000.1|Name=Ec-00_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=460bp
MDYCHVDEGSEAQNIIRQAEAPPDSPFRPRFRRRSGEIAIPAGFATAGAA
GGTIGPPTTGGGGSSGTGSSKSDVQRIKLGVLLGKRPVADALSRFLTLRD
VFKMGASCRQLMRMLLAVGGGAEGGAGAAAGEPQQQGAAAVGVVNGSNGG
GAAAGAGVGGAAAAGVAAAAAGAPAGPLLVHIRGSKEFLSYFRALEQNAA
WTQQRMMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSI
PENLGTLPNLRKLYLAGNQLVGPIPSSLGDIATLSDLSLAGNELSGAIPD
SFGNLTLLRYLSLRDNKLSGAIPESLGNLVNLEELWLNANQIEGAIPASL
GNMATARKVFLNNNCIEGTLPATLGNLSSLRILSLRHNRLTGTIPPELGR
LSQLKTLYMEKNELEGNIPDTLANLASLKELNLLGNKFQGKAQTRNLLIG
RLPNCVVYV*
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spliced messenger RNA

>Ec-00_002000.1 ID=Ec-00_002000.1|Name=Ec-00_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2772bp|location=Sequence derived from alignment at chr_00:2217787..2229411+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATTACTGCCACGTTGACGAGGGCTCTGAGGCTCAGAACATCATCCG
CCAGGCCGAAGCACCACCCGACAGCCCCTTCCGCCCGCGCTTCCGTCGAC
GCTCGGGCGAGATCGCCATCCCAGCAGGCTTCGCAACAGCAGGGGCGGCA
GGAGGAACGATAGGTCCGCCAACAACCGGAGGAGGGGGCAGCAGCGGTAC
GGGCAGCAGCAAGAGCGATGTCCAGCGCATCAAGCTGGGCGTGCTGCTGG
GGAAGAGGCCCGTGGCGGACGCCTTGTCGCGCTTCCTGACCCTGCGAGAC
GTGTTCAAGATGGGCGCTTCCTGCCGGCAGCTTATGAGAATGCTCTTGGC
CGTGGGCGGTGGGGCAGAAGGCGGGGCGGGCGCTGCTGCTGGGGAGCCGC
AGCAGCAAGGAGCAGCGGCAGTTGGCGTTGTGAATGGATCGAACGGCGGT
GGAGCTGCAGCAGGGGCAGGGGTGGGGGGGGCTGCGGCCGCTGGTGTTGC
TGCTGCTGCTGCTGGCGCGCCTGCAGGACCCTTGCTGGTGCACATCAGGG
GGTCGAAGGAATTTTTGTCGTATTTTAGAGCGCTGGAGCAGAACGCAGCG
TGGACGCAACAACGCATGATGGCCGTGTCTATCGTGTTGGACTATCACGA
CTCCATCGACGGACCCATCCCTTCTTTCCTTGGAGGGGGAGGCGGCGTGA
ACACGGTGGAGTGGCTTGACCTTGGGCGGAGCAACCTGACAGGAAGCATC
CCGGAGAACCTGGGAACGCTGCCGAACCTTCGGAAGTTGTATCTGGCAGG
GAACCAGCTGGTTGGGCCCATACCCTCCAGCCTGGGCGACATCGCCACGC
TGTCGGACCTCAGCCTAGCGGGAAACGAGTTGTCCGGAGCCATTCCCGAT
AGCTTCGGCAACCTGACGCTGCTGCGGTATCTCAGTCTAAGAGACAACAA
GCTAAGCGGTGCCATCCCGGAGTCTCTGGGGAACCTCGTCAACCTGGAGG
AGCTCTGGTTGAACGCCAACCAGATCGAAGGCGCTATCCCGGCGTCTTTG
GGCAACATGGCCACCGCGCGCAAGGTCTTCCTGAACAACAACTGCATCGA
GGGAACACTGCCTGCCACGCTGGGCAACCTATCCAGTCTACGGATCTTAA
GCTTGCGTCATAACCGCCTGACGGGAACGATTCCGCCCGAGCTTGGTCGA
CTGAGCCAGCTCAAGACTCTCTACATGGAGAAGAATGAGCTGGAGGGCAA
CATCCCCGACACCCTGGCGAACCTGGCCTCCCTCAAGGAGTTGAACCTGC
TGGGCAACAAGTTCCAAGGCAAGGCGCAAACGCGTAACCTCCTTATTGGC
CGCCTCCCGAACTGCGTCGTGTACGTGTGAGCGTGTAATCTTGTGGGGTT
GTGGGTAGGTCTCCCTCCCCTCCCTCGCCGTGCCCCTGCTGACCACCAAC
CAAGGGCACTTGTGCCGTGGGGCTGAGGTAGGTAGGAAGTAAGGCGTGTG
CGTGTGCTTGATGGGGGATGCCCATGTTTCTGCTTGCCTTGGGCGTTCGA
ACATTTTAAGAGCATCTCTCCGTGGGTAACGGAACGGGGGGAGAGGGAAC
GGGGGGGAGGGGTCCGTGGATGGTGTAGTACCAGACGACCCGAGCGCCAC
GCCGTTGGCGGTTGAGGTTGTGTTGCGTTTCTGCGGTCGTACTACGTCGT
TTGTTGAGGCTTGTGTTTGGTCTGGGTTAGGAGAGGGTTCGGGAAGAAGG
TCGTGTTGGTTTGTGCCGGAGCCGCATGCGTTCGTCAACGTCCAACCTGT
CAGCCGAAGCGGTCTGAGGTCGTGTGGAGTTGTCTTGCGTTGTTGCGGCT
TCGTACGGCGGCGATGGCGCCCACGTCGAGCATTGCTCCCCGACCCCCGG
CGGCTGAGAGAACGCGTTAAAGACGCTGGGATCTGTTGGTTGTGCATTTA
CATGTATTTCGGAATCCTCCGACGAATAATGGTTTCGTTTCTCGTGACTT
TGCAATCTGTTTGACAAACGAGAGACATTTTTTTCCTTGGGGGAGGACGG
CTGAAACAGGTAGCTCGGCATTAAGGTACACTAGATTTGGCCACCCCGCA
CGCGCGGGTGTAGGTCGCAGCATGAAAAGAGAAAAGAAAAAGGCCGGCGC
CGTTGTTTGTGCGCAGGTGGGTGTTTATTTTATGTTCTTTGTGTGGTGAA
ACACCTACCATAGCTCAGCGATTTGACGATAATTTTTGTCATGGCGTATG
CCCGCGCACGTGCCAGACACTGGACCTTCGAAGGGTGGGTACTCTAAGTA
TGTGGTATTATGCGTACGTCTTGTCTTGTCCCATGTATGCATCGATGAGC
CTGAGTTTGTGGCCGGGATAGTTTGTAGTTGTACGCGGTGAGGACAAGGC
ATTATTTTTTTCCTCCCTGCTCAAGGGCGCGCCGCATGTATCGTACTGGG
GCTCGGGGATAGAGCATACCTTGCCGCAAAGCGCGTCAGCTCGGTACTTG
ATACAGCAGATACCGTGTGTACCCGAGGTTGACGCGTGTAACATTTTCAA
GAGTCGTTGGAGCTGGCCGCCCTGTGGCGTGTACTACCTCGGCCCTTCCT
GGAGAAGACGGTATGTGGGGGAGAACGTTTTTGTACCACCTTAGGCCAAA
GTAGGAAGGAACGATTGACCATCGGTGATCAGTCCTGTGTGAACAATGCT
CCGTCCGAGGATGCGTGGTCTAACCGCTAAAAGGCATGGGGGAAAAGTGA
GTATGCCCCGCGGGGGGGGGGG
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protein sequence of Ec-00_002000.1

>Ec-00_002000.1 ID=Ec-00_002000.1|Name=Ec-00_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=460bp
MDYCHVDEGSEAQNIIRQAEAPPDSPFRPRFRRRSGEIAIPAGFATAGAA
GGTIGPPTTGGGGSSGTGSSKSDVQRIKLGVLLGKRPVADALSRFLTLRD
VFKMGASCRQLMRMLLAVGGGAEGGAGAAAGEPQQQGAAAVGVVNGSNGG
GAAAGAGVGGAAAAGVAAAAAGAPAGPLLVHIRGSKEFLSYFRALEQNAA
WTQQRMMAVSIVLDYHDSIDGPIPSFLGGGGGVNTVEWLDLGRSNLTGSI
PENLGTLPNLRKLYLAGNQLVGPIPSSLGDIATLSDLSLAGNELSGAIPD
SFGNLTLLRYLSLRDNKLSGAIPESLGNLVNLEELWLNANQIEGAIPASL
GNMATARKVFLNNNCIEGTLPATLGNLSSLRILSLRHNRLTGTIPPELGR
LSQLKTLYMEKNELEGNIPDTLANLASLKELNLLGNKFQGKAQTRNLLIG
RLPNCVVYV*
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mRNA from alignment at chr_00:2217787..2229411+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002000.1 ID=Ec-00_002000.1|Name=Ec-00_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11625bp|location=Sequence derived from alignment at chr_00:2217787..2229411+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATTACTGCCACGTTGACGAGGGCTCTGAGGCTCAGAACATCATCCG CCAGGCCGAAGCACCACCCGACAGCCCCTTCCGCCCGCGCTTCCGTCGAC GCTCGGGCGAGATCGCCATCCCAGCAGGCTTCGCAACAGCAGGGGCGGCA GGAGGAACGATAGGTCCGCCAACAACCGGAGGAGGGGGCAGCAGCGGTAC GGGCAGCAGCAAGAGCGATGTCCAGCGCATCAAGCTGGGCGTGCTGCTGG GGAAGAGGCCCGTGGCGGACGCCTTGTCGCGCTTCCTGACCCTGCGAGAC GTGTTCAAGATGGGCGCTTCCTGCCGGCAGCTTATGAGAATGCTCTTGGC CGTGGGCGGTGGGGCAGAAGGCGGGGCGGGCGCTGCTGCTGGGGAGCCGC AGCAGCAAGGAGCAGCGGCAGTTGGCGTTGTGAATGGATCGAACGGCGGT GGAGCTGCAGCAGGGGCAGGGGTGGGGGGGGCTGCGGCCGCTGGTGTTGC TGCTGCTGCTGCTGGCGCGCCTGCAGGGTGAGTGTGGACTGGCAAGTCTG GCTCCGTAGCGAAGACTGCGTTTTGAGACGAGACATGTTCTGCGACACAC AGCATGTCACCGGCTGTAAACCATTCCTTGCACACAAACACACTGCAATC CCCGAGTGTATTATTTTGGTCTGCGGTTGCCGGCGAAAACGTATATTTTC TCTCTTTCGGCACGGGAAAAGGATTCAAGTTGATGTTCTGTGATGACTCG AAACGATGAAATTTTGCAGACAACAGACGTTGCTTCCTGCGACGAGCCCA CTCAGTTATTTGTTCTGAATGGTTCTCACGGACTTCCGTAAGAGTCGGAG AGATGGCGCCCCCGTGTTAGCGTTTTTGTATAGCGTATTTCTCCACAACC AGGGGGGTACCACTGCCGAAAAGGGTAGTTTTGGAAACATCTCGTCGAGA GCTTTCCTGAGAGGTATCGGTTGGTGTTCGCACCCTCCTAGTTGAGGAGA AATAGGGCATAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCCCTCCCTACTTGTGGAGAAATAGGCTAAACGAAAA CGCTAACATGGGGGTGCCATCTCTCCGACTCTTACGGAAGTAAGGCCTGG TTTCAGAGGTCGTTCGTTCGGTCCTGCTGTGCGTATGTGGGTACCATTGT AGAAGCAGAGTGAGACAGCTCGAAACATGTAATTGCGTGAGCGATATGCT TTCCCAAACTGCATATGGTGGCGGATGTGCCGTGCAGCGAAGGAATAGGA ATGCAGCAGACATCAGTTCTTCCCCACCCTATTGCACTCGCTGCTCCAGC ATGCTGGTGGTGTTTTCTCCTCCTGCCTTTATGCTGTGTATCGCAGCAGG GATCACGCAATCAGAAGTGTAGGTGGTGGGGGGGGCGTACTCTTATGTTT TGCATGCCTTAGCGGTTAGACCATTGACCGCGCGTCCTCGGAGCATTGTT CCCACAGGACCGATCACCGATGGCCAATCGTTCCTTCCTACTTTGCCAAA GGTGGTGGTTGGGGGGCGTTCTATAAAGCCCAACGATGTGTGTGGCACTT ATGTAAGGGCGCGGCGGAGATGCGGGCGGATCTCCTCTTCAAAATAGACG AAAATCGCCGCTGCATATCTTGGTTTTGCAATTCTACTCCAGTGTCAATC TACCATCGCACCCAGACCGCCCACAAATGTCGCGAGTGTGCAATATATGC ATATAGCTAGTAGGCTGATAGCGCTTGTGATACACCACTACAGATTTTGG CGGTCCGCGATTTCCAAAGTGGCCAAAGCAGAATTTTGTATGAAGCCGGC TTCTAGAAAGGTTTTAAACAATCTCTGGGAACTTTCGCACACGAGCACCT GGTATCAAGTGGCACGTTGTTCATCGCTTTCTTTTGGGTGATCAAGTGCC GACACGACAAACAGGAGGCAAGAGAGAGCACGTTTGGAGCGCCACCCGTC CGCCCTCACCGCGCATTTTATGTTTATTAATCCAAGCAATCGGTCGAGAT AAGAAATAGTCGGTGATTGTGTTCGAGAAGCACGCACACTCATCGAAACT TCCTTTTCACGACGGGTGCACCAGCCTAGCTGTCACCACTGCTGCCTTCT CCCTATAGAAGCCGAAATCAAACCATTAGACTAGTCAGCTGTCTCTGACT AGTCTAATGGTTTGATTTCGGCTTCTATATCCCACACTCATATGGAAAAG GATATCCAGTCGCTGTCCGATTTTCAAACGCCTTAAGCACTTCTGGTTGA GGTTAGACCCACGTATACATGATACCCAGGCCTTCAATTTGACTACGGCG ACGACTACATATGTAGGATGCGCGACTCAAGTCGGCGGTCACACGCACTG ACGTAGGCGCTGGTTCGTCGCCAACGTGTGCTTGAAGCGTTCGAAAATCG GACCCAGAGGGGCATCCAAAATCTTGCTTGTAGCACACCGAACTCGATGA TAGAAGGATCGCTCCGAAAGGTCGCTGATGGCGAATCTGTACCATGGTGG TGTATCACAAGGACTACAATCCTAGCTACTTTCAATAGCTACTTTCAAGG GGTGCTTCGCCCTCCCCCCCTGTGGGGGCCGGTCTCGTGTACTACCCGTA GGCAAAGAAATGGAAGGAAATGTTTGAAGGTACTACTGTGCAGTTGTTGA GAAGATCGGCAACTGGTGTGAGTAGATCGAGGATCGGATAGATACTAATA TTTTGCTGTATGTAGGTTCGAATGTTCGCATGGTTTGGAAAAAAGTGCGT CATATCTTAGTCATGGTGCGGGAAGATGTTGCACAGGGCTCATCCCGGGG CACACATGCACACGAGATGGTGATTCTGCGTGCGTGTGTGCCAAAAGTGC CTGTTCTGTGTGTTAGTCTGGCTGATGCTATGGCCGTGTAGGACTACAGC AATGCAGCAGCAGCAACATTAGAAGACGACCTCGGAATCTAGCAAGCTGC GTTTGTTTGTTTGTTTCTCTTCCCATTTTCAGGAAGAGACGTTTTCCCGC TTGGCTCAACAGCAGCAGCAGTGTTTCAGCAGTAGTCCACAACTCTCCGT GCATGGCTTAAAGTGCCCGTGTACCATCTCGTAAGTCATGTACAAAAGGT AGACGTACACCATGAGTACTTGTGTGTTTGCTGTGGTACAGATCACACAC ACGTTCAGTTGAAGTTCGTTCCCAGAAGCACCGGCGCGACAGAAAGAGAG AACGTGCTTCGTACCTACTTGGGGGACGAAAGTGCCCGTGTCCGTGCGGG TAGCTGTCGTGCTGCAGGGCGGGCTACGCGCGCGGGGCGCGCTGTGGGTA CATCATTCCCGTCCGGGAGCCGCAGGAACGAAAGAAAGACTGAGAGTTGT GAGCGGTATAGAGACTGCTGACAGCAGTTGTGAGCGAGGTAGAGACATAC GCTGCCAATATGCTATATTGTGACTTGCTGTGCCTCCGTTATTCGTCATT TAGACTAAATATGACAATAGCTGATTCTGACGTCATACAAGCCGGCAGAC ACAACCACAGAGAACCAAAAAAGCTTGATTTCCAGAAAAAAATGCCGGCG GTCCAGCGCCTGCAGCTCTTGCCACAGCGCACCGCGTGGCGCGACACGCT CGGGACGTGCTGAGTACGTTCTTTCCGTCCGGGAGCCGAGAGCGACAGAA ATCGGTTTCAACGGCGACCCCGACAAAAAACGGATGCACCAGAGAGCAGC ACGCGTGAACCGCCAAAAGGAAATCCTACAGATGGATATTCTAACATTGC ACACTCGCGACCTCTGCGGACGGTCCGGGCGCTATGGTAGATTCGGACTG CAGGTAGACTTTGGAAACCGAAGACATGCAGTCGTTTTCCTAAAAAAAAT TAGGGGGAGAGCTACCAACTCCACCGCTACCTCAAGGGGTTCTTGCCAAA TCGATTTTGACTGATGGTTTCGAAGACGACCCAGGTTAAACACCCAGCAA CCAATCACGATACACAAAGTCGGGGAGGGTCGCACAGTTGGGACTCGTCT CCAACAGCATACTGTGTCACTAGGACAAAACTCTCCACCCCCCTACAATG AAGACAATCAGGCGACACGGCAGGTGCTCCGATAAGTTCATTGCGTTGCG GAGTCCCGACCTTGGCACCTATTCCAGCAGAGGACATCATCGGGCAGTGA CGCGCGCGTTGACACGCCCAGATCTTGTTGCTGGGGCCGTGCTGTTGAAG GCTGCAGCTGCCGTCCGAAAAGTCCGCAAGTCTGGGTCCATACCATTCAT GATCCACGGCTGTACGCGCCGTCACAGGCCAATCAATCCCCCGAACTGCT GGCCATCCAAGGAAAGCTAGTCGTGCGAGCTACCGCTGTAGATTACTGCT TCTGTAGACCAGCGGTTGTGGGGTTGGGTCTGCGTCGGCGCATCCAGCAA TGCATGGTTGCTTGTGTGGACCCAGACCTGCCAACTTCACGGACCGCAGC TTCAGCCTTCGACAGCACGGCCGGCCCCGACAACAGATCTGGGCGTGCCA ACGCGCATGCCGCTACCCCATGATGTCCCGTCTACTGGTACAGAGGAGCA ACGTCGGGACTCCGCAAGCCGGAAGGTTGCTTTTCGATTTTTTGGCTACC AAATGGTCTTGGGTTTATAGCGTAAATAGAAACTTTTGTGTTGAACAGTG GCCTGAGGTCCCAAACGAGGTTGCGCCTGAAGAGCATGAGACCTACCGTC CGGATGTCGTGTTTCTTATGATTCACGCTCGGCTCTTAGCCCTGCTGTAT CCCACTATGGGTGCGGTCTTCGAACCTGTTGGTGTGTCGTACTCTTTGAA TGCGGGGAGTTTCTGACAGTCCCGTGCAGTCAACGAGTACGACACACGCC AGACAGAAGACCTCCTCCATATGGGGACGCATAGCTAGGAGCCGAGCTTC AAGCATCAGAAGTACGAGATGTGAACCGTAGGCCGCATGCTGTCCAGGCG CAAGCTCGTTCTGGACCTCAGGCTGACGACAAACGAGTGGCTTGCCAACC CCGGCAATATATTTGTATTCGCTAAATCCCAAGACTAGCAGGAGGTCAGA GAATCGAAAACAACCTTCCGGCTTGCGGGGCCCCGACGTTGGACGTCTGT TCCAGTAGGGGGGACATCACCCGGCATGCGCGTTGGCACGCCCAGATCTG TTGCTAGGGCTGCGCTGTCGAAGGCTGCAGCTGCTGTTCGAAAACTCGGC CAGTCTGGGTCGATACCATTCATTATCCACTGCTGTACACGCACTCACAG ACCCAATCCCCCGAACTGCTGGTCATTCACGGCAGCTAGTGGTGTGAAGC TACCGGTGTAGACCACTCCTGCTGTAGACCAGCGGTTGGGGGGGGTTGGG TCTGCGACGGCGCGTATAGCAGTCGATCGTGCGCGGCCCAGATTTTTGGA CATTGCGGGCCTCAGCCGCAGCCTCGCCCTGGACGGCGCGGCCACAGCAA CAGATCTGGGCGTGCCAACGCCCATGCCGCTGCCCCTTGATGTCCCCTCT GCTGAGTTCCTGTGTATTGCCCCATTCTGTCCTCGACTGTCTTCCCATGA ACACATCCTAGGGTCTGAGAATTTGTTAAACGTCAAAAGCAGACGCCGTG TCGCCTGTTTGCCTTGAATTTGGAATACTGGAAGATTTTGCATTATTTTA GAAAGAAAATGTGATTGTTGTGCTCGTCGTCTCCGGCCAAAGGCTGACTA CCCCGTCCCCCTAGCCAATGCTGGGTATCTACAGTCTACGGCAGCCAAAT ACCTTTGCGTGTCTTGCGAGTCACATGCGTCCTTTCTCGGCAAAGTGGGG GGCCCTGTTTTGTGCCGGTGTTTTCGGCGGGCACACACTGAATTTCCAAG TTATTCTCAATCCGGTACAATATAGTGCTGGTGAATTTTCTGGGCACACA CCGGCACTAAACAGGGACCTCTACTTTACTGCAGTTGGACACCCCCATTT TCCGGGTGACTCAACGACGTCGTTGAGTTGCCCCGCTGCTGTTTACTCTA AGTCGCCTGAAAACCAGGAACGTGTGTTTTCCAAGGCCCAAGAACAGCTG GCATCGTGCCACACCCACCGTTAGCCTTGACCATCTAGATACATCTGAAC ACTTGCTCACTTGCCGGCTCCATTTTTGTGACGTTTCGTCTCCCCTTTTG TTCCGTTTTTCTGTTCCCAGACCCTTGCTGGTGCACATCAGGGGGTCGAA GGAATTTTTGTCGTATTTTAGAGCGCTGGAGCAGGTGAGAGTGGTCTTGA GGAAATGCCCGCCGTTGTTTTGAAGACACGGGGTTGCGTCGCTGCGTAAA GTGTAGTCGTCGTGTCCCCATTCGGCTCGCGTCCTTGATCACCGAGTGTT GAGGCATCTGGATCGCAATTTGTTCGATTCTTCATTTGGTGCTCCTGGGA CACACGCTACTGTATATACGCAAACCCTTTTTCCGATCGTGCGTTGGAAG TCGGGTGAAAGATGGGATCTCGTTTGCGTTTTGCTTACCGTTGTTCCTTC CTCGTCGGCGTAGCAGCCATATTGTGAGGAGCGCGCGATTTCTGCGTTTC TGCTCCCCCGCCCTTCCCGTCTCTATGAGGGAACCCGCCCGTAGACCCTT CGTCGTACATGCTGCGATTTCTGATCCCTGGCCTGCCTGTTGATTGGAAA CTCCTACCTTCGAACCTCCTCCTTGGTTATTTTGAAAACCAACAAAACAG AACGCAGCGTGGACGCAACAACGCATGATGGCCGTGTCTATCGTGTTGGA CTATCACGACTCCATCGACGGACCCATCCCTTCTTTCCTTGGAGGGGGAG GCGGCGTGAACACGGTGGAGTGGCTTGACCTTGGGCGGAGCAACCTGACA GGAAGCATCCCGGAGAACCTGGGAACGCTGCCGAACCTTCGGTAGGGCGG ATAGATCGATCGATCACGCTGTTTTTGAGCTTGAGCTTGAGGTTTGGTTT TGTTTGCCGAGAGATGTAAAAAATAAAATCTCGCTGGCGAGTAGCGGCGG TGATAGTTGTTGGGCGTTACCGCGTAACGAGGTTGAAAGTATGTTCTGGG TGCACTTGGATACGAGATCCGATCTGAGGGGTATGCGTGTGTTTGGGGTA TGTGTGTGTTTGGGGTTCAAGTGCGGGATGCCTCGAGCGAGCACGCACGT ATAGTTTATTATGTTGGTTGTGTTTGGTGTGTGCTGGAAGGAGCATGGGT ACGTGTTAATAAAGCTTTATGTCATAAACATCGGTCCTGGGTTAGCCTAG TCCCCACACTCAACCCAAGTACCGCGGGAAGGCGGGGTGGCCTTTTCTCA CTCCTGCCGAAAGTAAAGGCCTTTCGTATCCACGCACCATGTAGCGTTCC TTGATAGTACTTGCGGTGATGGTTCACATTTGACATTTTGTTTGATCTTT TTTTGTGTGTTTGGTTATTTTCCTGGCATGCAGGAAGTTGTATCTGGCAG GGAACCAGCTGGTTGGGCCCATACCCTCCAGCCTGGGCGACATCGCCACG CTGTCGGACCTCAGCCTAGCGGGAAACGAGTTGTCCGGAGCCATTCCCGA TAGCTTCGGCAACCTGACGCTGCTGCGGTATCTCAGGTGCGTCTTTCTCT CTCTCTCTCTCTCTCTCTGCTCAACTGGTGCTCTCTGCTTCGTGTTTTGC TCCACGCAACACTGGTGCGGATAATCGTATTGATCTTTGCCCTGTGCTAC CGGCTGTTTAGTGTTCACTCTCTGGAGCACATTCATCGGTTTTAGAATCG CACAGGGAGGGACCACAGACGCCCATTACCTATTTTTGCTCGTAGTAGTT GATCTTCGAACCTAATTTAGCAGCGGCCCGTTTTCCAAGACTGAGGAAGA AAAATATTTCGGCGTGCTTGGGCGCACCATTGCTGCCAGCGAAACCGCGG CTCTTCAATGCTTGATTGCGCACGAGGGGTGGTCAGGGTTTGTTGCGCGT CTTTAGCAGTGTTGAAAATAGTGGTTTCTGTATTAGGCCGGCGAAATCGC GTGACACGCGGATTGAACGTTCACGTTGTTTCAATACTCTTTGAATAGGG CAACTGGTGCCGTGATTTTAGTCGGAATACGGGAAATCTTTTTCGGGATT AGCGGTGGGAAATTGCACTCTGTCAGGGATACGCCTTGAGTCTTTTTTAA AGCAACACCTACATACTTTGCGGACGTTGGCTACATTATCCTTGGCGTTC TTCGTGCCCAAGCTGCATCTACTATTGTGCCGCCGAGAGATACCAAAGGG GATTCGGCGCGTTAGCATCTATCCCTCCGCCATGCCTTCCAGCGTTATCT TTGTGATATTTTTTGTGTCTGACGTTGTGTCTGCACGTTCCTGCGGTGTT GTCGATCTTGTGTTTTTTCCCCCCCGCAGTCTAAGAGACAACAAGCTAAG CGGTGCCATCCCGGAGTCTCTGGGGAACCTCGTCAACCTGGAGGAGCTCT GGTTGAACGCCAACCAGATCGAAGGTGCGAGTCATGAAAACAACAATTCA TCATACAAATGTAGCCCCACTTGTCGGTGCAGCAGGCGAGGAATATCCCT CCCTTTACGGCAGTGGCGACAGCAACTACAGGAGATAATTGTAACCGCCA TGGTGTTGACGCACCTACGGAGCCACCACACGGTTGTGGGTCTATCTACA TCACGTGTTCTCAACTTGTTTTGCGGCATTTTCCGTTCTTGCGTTTGGTT TTGTATGTGATGCGGTGTTGGTTGATGCAGGCGCTATCCCGGCGTCTTTG GGCAACATGGCCACCGCGCGCAAGGTCTTCCTGAACAACAACTGCATCGA GGGAACACTGCCTGCCACGCTGGGCAACCTATCCAGTCTACGGGTGAGCT GGAAGCAAGCACGCTCAATAGAGGAGAATGTTATGCTGAGGGAGGGGTGG GACACCGGTTTGTAGGATACGGTAGTGGTCCCACTATTATGCTTACAGGT GCCAGCCGCTTTGAACCGGTATTGTAGCGGGCAACCGGCATTATTATTCA AAAGTATGGGACATCTTGAATATTCCATCTGCGTCACGCAATTTTACTGT ACACGTACTGAATGCTGAAAACTAGGACGTATTGATTTTAACGCCGTAGT CAGCACGTCCCTCGGGGGTTCCGTCGCTATAGCCTCCGTCAACCCCCCCC CCCCCCCAACCCCCCAGAAAAAAATGTTGTTGTCCACTTGAAACCGACAT GGTGTGTTGTCGCTTTCGCGGCAGATCTTAAGCTTGCGTCATAACCGCCT GACGGGAACGATTCCGCCCGAGCTTGGTCGACTGAGCCAGCTCAAGACTC TCTACATGGAGAAGAATGAGCTGGAGGGCAACATCCCCGACACCCTGGCG AACCTGGCCTCCCTCAAGGAGTTGAACCTGCTGGGCAACAAGTTCCAAGG TGTGGAAGGCAGCGGTAGTGGTAGAGGTGATATTTCGTGTTGCTGTTTTG GCGCGTGGGGTGTCGTCCTAGTTGTGACAATTGTTGTTGTGACATCGACA AACGTTGCGCTTAACACGCCATTTTTGTTTTCTTTCGGAAGGCTAAACAC CGACTTGGTCCGTTGTGGTCAATGGAGGGTTTTGTCGAACGGTGTGTAAC AGCTGGACAGACCGTCGAGCGTGGGCTGCGCGGTATAGTCGCTACAGTAG CAACTGTGGCAAAGGCGGTGCACGCAACTCTGGTTTTGCTTGCGGCCACT GGTTGGCGTGCTCCCTGCACTGCTGTTGGAGAGACGGGTGTGCCATGGGG GGAGGGTGGAAAGCTTGTCTGAAGTTTTCTGTCAAGTGGTGCCGCAACTT GAAATAGTTTATACCCCCTACTCGCACACAATGCTCCGTCCTCTGGAGGA CGCGCGGTCAATCGGCCCAACCGCTAAGGCATGCAAAACATGAGAACGCT CTCCCCACACACACAATCCCTCCACCTATCACGCGCTCCCGTCGTCTTGC GTCTGCCTGACCTTGCGTCCTCAATCCCTCGCCTCTCGCTCGCTCGCCGC TTTTTTTTTTTTTTTTGGGGGGGGGGGCGGGGGTGTCGTTTCCCCTTCTT TTTTTCTTGCTGTCTTACCAGGCAAGGCGCAAACGCGTAACCTCCTTATT GGCCGCCTCCCGAACTGCGTCGTGTACGTGTGAGCGTGTAATCTTGTGGG GTTGTGGGTAGGTCTCCCTCCCCTCCCTCGCCGTGCCCCTGCTGACCACC AACCAAGGGCACTTGTGCCGTGGGGCTGAGGTAGGTAGGAAGTAAGGCGT GTGCGTGTGCTTGATGGGGGATGCCCATGTTTCTGCTTGCCTTGGGCGTT CGAACATTTTAAGAGCATCTCTCCGTGGGTAACGGAACGGGGGGAGAGGG AACGGGGGGGAGGGGTCCGTGGATGGTGTAGTACCAGACGACCCGAGCGC CACGCCGTTGGCGGTTGAGGTTGTGTTGCGTTTCTGCGGTCGTACTACGT CGTTTGTTGAGGCTTGTGTTTGGTCTGGGTTAGGAGAGGGTTCGGGAAGA AGGTCGTGTTGGTTTGTGCCGGAGCCGCATGCGTTCGTCAACGTCCAACC TGTCAGCCGAAGCGGTCTGAGGTCGTGTGGAGTTGTCTTGCGTTGTTGCG GCTTCGTACGGCGGCGATGGCGCCCACGTCGAGCATTGCTCCCCGACCCC CGGCGGCTGAGAGAACGCGTTAAAGACGCTGGGATCTGTTGGTTGTGCAT TTACATGTATTTCGGAATCCTCCGACGAATAATGGTTTCGTTTCTCGTGA CTTTGCAATCTGTTTGACAAACGAGAGACATTTTTTTCCTTGGGGGAGGA CGGCTGAAACAGGTAGCTCGGCATTAAGGTACACTAGATTTGGCCACCCC GCACGCGCGGGTGTAGGTCGCAGCATGAAAAGAGAAAAGAAAAAGGCCGG CGCCGTTGTTTGTGCGCAGGTGGGTGTTTATTTTATGTTCTTTGTGTGGT GAAACACCTACCATAGCTCAGCGATTTGACGATAATTTTTGTCATGGCGT ATGCCCGCGCACGTGCCAGACACTGGACCTTCGAAGGGTGGGTACTCTAA GTATGTGGTATTATGCGTACGTCTTGTCTTGTCCCATGTATGCATCGATG AGCCTGAGTTTGTGGCCGGGATAGTTTGTAGTTGTACGCGGTGAGGACAA GGCATTATTTTTTTCCTCCCTGCTCAAGGGCGCGCCGCATGTATCGTACT GGGGCTCGGGGATAGAGCATACCTTGCCGCAAAGCGCGTCAGCTCGGTAC TTGATACAGCAGATACCGTGTGTACCCGAGGTTGACGCGTGTAACATTTT CAAGAGTCGTTGGAGCTGGCCGCCCTGTGGCGTGTACTACCTCGGCCCTT CCTGGAGAAGACGGTATGTGGGGGAGAACGTTTTTGTACCACCTTAGGCC AAAGTAGGAAGGAACGATTGACCATCGGTGATCAGTCCTGTGTGAACAAT GCTCCGTCCGAGGATGCGTGGTCTAACCGCTAAAAGGCATGGGGGAAAAG TGAGTATGCCCCGCGGGGGGGGGGG
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Coding sequence (CDS) from alignment at chr_00:2217787..2229411+

>Ec-00_002000.1 ID=Ec-00_002000.1|Name=Ec-00_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1380bp|location=Sequence derived from alignment at chr_00:2217787..2229411+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGATTACTGCCACGTTGACGAGGGCTCTGAGGCTCAGAACATCATCCG
CCAGGCCGAAGCACCACCCGACAGCCCCTTCCGCCCGCGCTTCCGTCGAC
GCTCGGGCGAGATCGCCATCCCAGCAGGCTTCGCAACAGCAGGGGCGGCA
GGAGGAACGATAGGTCCGCCAACAACCGGAGGAGGGGGCAGCAGCGGTAC
GGGCAGCAGCAAGAGCGATGTCCAGCGCATCAAGCTGGGCGTGCTGCTGG
GGAAGAGGCCCGTGGCGGACGCCTTGTCGCGCTTCCTGACCCTGCGAGAC
GTGTTCAAGATGGGCGCTTCCTGCCGGCAGCTTATGAGAATGCTCTTGGC
CGTGGGCGGTGGGGCAGAAGGCGGGGCGGGCGCTGCTGCTGGGGAGCCGC
AGCAGCAAGGAGCAGCGGCAGTTGGCGTTGTGAATGGATCGAACGGCGGT
GGAGCTGCAGCAGGGGCAGGGGTGGGGGGGGCTGCGGCCGCTGGTGTTGC
TGCTGCTGCTGCTGGCGCGCCTGCAGGACCCTTGCTGGTGCACATCAGGG
GGTCGAAGGAATTTTTGTCGTATTTTAGAGCGCTGGAGCAGAACGCAGCG
TGGACGCAACAACGCATGATGGCCGTGTCTATCGTGTTGGACTATCACGA
CTCCATCGACGGACCCATCCCTTCTTTCCTTGGAGGGGGAGGCGGCGTGA
ACACGGTGGAGTGGCTTGACCTTGGGCGGAGCAACCTGACAGGAAGCATC
CCGGAGAACCTGGGAACGCTGCCGAACCTTCGGAAGTTGTATCTGGCAGG
GAACCAGCTGGTTGGGCCCATACCCTCCAGCCTGGGCGACATCGCCACGC
TGTCGGACCTCAGCCTAGCGGGAAACGAGTTGTCCGGAGCCATTCCCGAT
AGCTTCGGCAACCTGACGCTGCTGCGGTATCTCAGTCTAAGAGACAACAA
GCTAAGCGGTGCCATCCCGGAGTCTCTGGGGAACCTCGTCAACCTGGAGG
AGCTCTGGTTGAACGCCAACCAGATCGAAGGCGCTATCCCGGCGTCTTTG
GGCAACATGGCCACCGCGCGCAAGGTCTTCCTGAACAACAACTGCATCGA
GGGAACACTGCCTGCCACGCTGGGCAACCTATCCAGTCTACGGATCTTAA
GCTTGCGTCATAACCGCCTGACGGGAACGATTCCGCCCGAGCTTGGTCGA
CTGAGCCAGCTCAAGACTCTCTACATGGAGAAGAATGAGCTGGAGGGCAA
CATCCCCGACACCCTGGCGAACCTGGCCTCCCTCAAGGAGTTGAACCTGC
TGGGCAACAAGTTCCAAGGCAAGGCGCAAACGCGTAACCTCCTTATTGGC
CGCCTCCCGAACTGCGTCGTGTACGTGTGA
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Synonyms
The feature 'Ec-00_002000.1' has the following synonyms
Synonym
Esi0013_0194
Esi_0013_0194