Ec-00_001760.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001760.1
Unique Name	Ec-00_001760.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	518

Homology

[Close]

BLAST of Ec-00_001760.1 vs. uniprot
Match: D8LEC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC8_ECTSI)

HSP 1 Score: 1009 bits (2609), Expect = 0.000e+0
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 1

Query:  625 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA 2175
            MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA
Sbjct:    1 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA 517

[Close]

BLAST of Ec-00_001760.1 vs. uniprot
Match: A0A6H5JSB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB6_9PHAE)

HSP 1 Score: 914 bits (2363), Expect = 0.000e+0
Identity = 458/519 (88.25%), Postives = 465/519 (89.60%), Query Frame = 1

Query:  625 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXN---VVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLN 2172
            M SRRGLWGWDDRTR SCGLPA PERLRRIGLESAVSSSRFRVRDH PWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVG G GGDA LRGFAPRWGG RK EERVLLTAAS RWRSQVSDIKFRGH  EWACATASLG GGQPGGVTARFWTGRGDLVNVFSE RLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQR IP+AKLSGDVFSMSFLPAAAPGAG+ALVCGLRDGTVVLVD RQPY H T AAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRF GHRGGALEVLVPPG QGKRAPWPAKFALDATETVVATPVA                 VVGGGERFPP PHAW+RF+SS+I GLPNGIGGS+YD RNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATV G E        RREEVRFWGTALAPGRGAAVFEA MTTSEDGYGREQ SG+TQ N
Sbjct:  229 MSSRRGLWGWDDRTRRSCGLPARPERLRRIGLESAVSSSRFRVRDHVPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGGGDGGDAQLRGFAPRWGGARKEEERVLLTAASRRWRSQVSDIKFRGHGAEWACATASLGDGGQPGGVTARFWTGRGDLVNVFSEGRLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRVIPVAKLSGDVFSMSFLPAAAPGAGNALVCGLRDGTVVLVDPRQPYRHRTPAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFFGHRGGALEVLVPPGRQGKRAPWPAKFALDATETVVATPVAAEAAAAARADGGTGAATVVGGGERFPPHPHAWQRFSSSTIGGLPNGIGGSMYDFRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVDGWE-EDGGGCCRREEVRFWGTALAPGRGAAVFEACMTTSEDGYGREQPSGSTQQN 746

The following BLAST results are available for this feature:

BLAST of Ec-00_001760.1 vs. uniprot

BLAST of Ec-00_001760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEC8_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JSB6_9PHAE	0.000e+0	88.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1974792..1980699 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	3688
Hectar predicted targeting category	other localisation
Gene id	Ec-00_001760.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760	Ec-00_001760	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 1974792..1980699 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760.1	Ec-00_001760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 1976300..1979703 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760.1.6	Ec-00_001760.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1974792..1977169 -
Ec-00_001760.1.5	Ec-00_001760.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1977617..1977748 -
Ec-00_001760.1.4	Ec-00_001760.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1978186..1978344 -
Ec-00_001760.1.3	Ec-00_001760.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1978501..1978838 -
Ec-00_001760.1.2	Ec-00_001760.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1979649..1980204 -
Ec-00_001760.1.1	Ec-00_001760.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 1980575..1980699 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760	3UTR:Ec-00_001760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_00 1974792..1976299 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760.1	CDS:Ec-00_001760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 1976300..1977169 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760	5UTR:Ec-00_001760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 1979704..1980204 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:1974792..1980699-
coding sequence from alignment at chr_00:1974792..1980699-

mRNA sequence

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=518bp
MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWA
HTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDA
PLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATAS
LGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTP
ARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSAL
VCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTR
CLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATE
TVVATPVAAAAAAADGGAGAANVVGGGERFPPQPHAWERFTSSSIDGLPN
GIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWV
SLARGAGATVGGREGGGGGDCCRREEVRFWGTALAPGRGAAVFEARMTTS
EDGYGREQRSGTTQLNA*

spliced messenger RNA

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3688bp|location=Sequence derived from alignment at chr_00:1974792..1980699- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
AAGCACCACGGCTCCAGGGCCCCCCACTGCAAGCTGGCAGCGGACAAACC
ATGCCCACCTTCAACGCAAATAAAAACAGAAGAGGGACTGGGAAGAAGAG
AAGAAACAACAGATCCCGACCAACGGAGACTGCGCCCCATATCCTGGCCG
CACTGGAGGCTCAGCGGGCCAGAACTGCGCAGCAGGTGCCTGCACCGCCA
TCAGCAGCAGCAGCAGCAGCAGCAACGACGACCCCGGGAAGCGGCAGTCC
TCCACAGCCACCGCCGCCGCTCCCCCAAGCATTACCGGGCCACATGTTCG
ACCCTGCTCGCAACCGATACTTCCGGTGTGTCAAGGACTGCCAGGGGACC
CCCGGGATAGTAGTGGCCGACAGCAAGTCGAAGCAAAACCTCAGAATCAA
GATCGGCAGTGGGAAAAGCAAAAGCTCTGGGCCGCCGACCCCGCCGGCGC
GAAGCAGCAAGGCCGGCGGAGGCGAAGCACGGAGTAACTTCGTGGCAAAT
CACGGTGGCAATGGCCGTACTTATGTCGCTGTCGCTGCCTCTGCGGGATG
CCCTGCGGATGCTGCCCCTTGGGCCGGGCACTTGGATAGCCGTTCGGTCG
CGAGAAGAGGGCTCCACCCGTACGCCATGAGGAGTCGACGTGGGCTTTGG
GGTTGGGACGATAGAACCCGGAGTTCGTGCGGCTTGCCGGCCGGTCCGGA
ACGACTGCGCCGGATAGGGCTCGAGTCGGCAGTCTCCAGCTCTCGTTTCC
GGGTTCGGGACCACGCGCCCTGGGCGCACACCAGCGTTATCCACGGCGCC
GGTTACTCGGCCGTTGACTGGGATGCCGGGCGGGGGGTCCTCATCGCTGG
CAGAAAGAACGGCGGGCTTGCAGTGATGATGACCGGGGCCCCGATGAATG
TCGGCGACGGGGGTGGTGGTGATGCCCCGCTTCGGGGGTTCGCTCCACGG
TGGGGCGGGGTTCGGAAAGTGGAGGAGCGCGTGCTCTTGACAGCTGCATC
AACACGCTGGAGGAGCCAGGTTTCCGACATCAAGTTCCGTGGACACGCAG
AGGAATGGGCCTGCGCGACAGCGTCGTTGGGCGGCGGTGGCCAGCCAGGC
GGGGTGACTGCAAGGTTTTGGACCGGACGTGGGGATTTGGTTAACGTTTT
TTCCGAGGCGCGCCTGGTCGATCAACAGCTGCACCGGGGCTCCGCCTGGT
GCACGGAGTGGGACCCCTTAACCCCGGCGAGACTGGCCATCGGGCCGAGC
ACCTGCAGCCCCGTGGTGTTCTTCGACGTAGATCAGCAGCGACCGATACC
GATAGCCAAGTTGTCGGGGGACGTCTTCTCCATGTCCTTCCTGCCCGCCG
CCGCCCCGGGCGCCGGCAGCGCGCTCGTCTGCGGCCTGCGCGACGGCACC
GTTGTCCTCGTCGACTCCCGACAGCCGTATCACCACGGGACCGCGGCCGC
CGCCGGGACCCTGCTGGCCCCCCGAGCGGACCCCTCCTCTGTAGACCACA
CGCACATCCTGCGCGACGGGACACGGTGCCTCGTCAAGGACCGCTCGGGC
TGTTTGCAGGTCACCGATCTGCGGTTCTCCGGGCATAGGGGGGGGGCGCT
GGAGGTCCTGGTTCCGCCCGGGGGGCAAGGGAAGCGGGCGCCTTGGCCAG
CGAAGTTCGCCTTGGACGCAACGGAGACCGTAGTCGCGACGCCGGTAGCG
GCGGCAGCGGCGGCAGCGGACGGCGGTGCCGGCGCTGCCAACGTAGTCGG
CGGCGGCGAGCGCTTCCCACCTCAACCCCATGCTTGGGAAAGGTTTACCT
CTTCGAGTATCGACGGCCTCCCAAACGGTATCGGCGGGAGCATCTACGAC
GTCAGGAACGATCACGGCGGCGGGTACGGCGCCGAGCCGGTGCCTGCGGA
GGGGGACAGCGTGCGACTGCTGAACGTGTCTTCGGGGGAAGTGCTTAACG
ACATCCAGACTCCCTGGCCGTGGGTGTCACTCGCGAGGGGAGCAGGAGCA
ACGGTAGGCGGTCGGGAGGGCGGCGGCGGCGGCGACTGCTGTCGCCGCGA
AGAGGTCCGGTTTTGGGGGACAGCGTTGGCACCCGGGCGCGGAGCTGCTG
TGTTTGAGGCTCGCATGACCACGTCTGAGGATGGATACGGGCGGGAACAA
CGAAGTGGTACAACTCAGCTAAATGCGTAGCTCGGCAGGGTGCTACGTGA
TGCCCCTCCTTGTCCATTTATCGCGGGTGAGACCGCTCGCAATGGTATAT
GCCAGCGTCAGCGGCGTACCCCCGCTGGAAGCTGGGTCGTGAAGGACATA
CGGAGTAATTTGGACCAAAAGCACAACAGGTGTCAAGACCAGCCTGGCGA
GGGGATACTTCCTTCCCTACGTTGCAAAAGCATTAGCCACAAGAACGCGT
GTGGGTCAGTGAGGTCGGTACGCGGAAGGTACATATGTGTAGACCCCGGG
GTGTCGCTGGAAATAGTGCATGTGAAACAGTGCCAATATCCAGAGAGGAC
AGTGGGGAAAGCGCCAGTCGAATATACGCGCTTAGTCTATGTGTTCGTCA
GGTGGAAACTTGCCGGGAATTGAACACTTGTGGTGTCCAGCCCGGCGCCA
CAGACGGCTGCAGCGCTCAGGCCGAAGAGCTCGCTGCTCTATGTACGATG
TACACGACATGCGTTGAAGAGGGTACACGATGGGTATTTTGGTAGCGGAC
TATTTCAGTTGTCTTTAGCGCATGTCTCGTTGGCAGCTTGTCCCACCCCC
TTCCGAAAAGGGTTTTCCATACCGAAGGCCCCCTCAATAACCGCAGCAGT
AGCGCTCCGCATCTGCTGCAGTGCCCCAAGTTGAGAGGCCCATGAGGTTC
ACACCGTCATGGTCGATGTAACCCTACGTTTACAGTCATGGTAGCGGAGC
TGCTGCAGTTGTTCGCACGAAGCCGGCGCCACAAAGAACACCACCGCCGC
TGCTTGTGCGTTGGACGCCTACTAATATCTTCTTGTTCGAATGCATGATG
ACCAGATAAAGCTGCACGTGACTTGCCCTGCATGCAAAGTTGTCCACTAA
ATTGGGGGGGGTCGCGCAACAGCTGAAGTTGGATTCATCAGTCTTCGGGC
CTTCCTTGAGTACCAAGTCTGTGTTGATACGCCCAAATATTCTGAGCACG
AGTCTACAATTTTCGGAACATGTTTGAACCCACCACCCGGGTTTACACAG
GAAGAACCCTGGAGCTTTTTTTCGCTCCACCTTTCCCGATGCGGTGCTTG
GTTTTTGGACGCGATGGGGGTTCAGTAGTATCTGCCCTCGCGTTGTGCTG
CTCACGGCCGTACGCTTTCCGCCTCTACATGGCGATGTCTCTACTCCAAC
GGGATTTCGAACCCGCCATCTGGCGACGCGAAGGCAACGAGGTTGCCAAC
TGAGCCATCGGGGCGGCCGGCGTCATGCGTGTCCGGAGGTATGTGTGTGC
TAAATTCCGGCTGCCTTTCGTTCTCGCTTCTCTTTCCTCTGGAATTGTTC
CAAGCCTCAGCCAAGCGCCTCACCGCCCAAGTCCCGCAAGGAGAAAGATT
GCATCATGTGTAGCGTTGCGATGCGATGTACAGCAGGGTTCCACAAGCCC
CACCAAAACGAATGTTGCAATGCATACATACATGGATTATTTTCTCGCGG
ACGGCAGAGTGTCTATTGTACGTGATGTATAATATCCA

protein sequence of Ec-00_001760.1

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=518bp
MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWA
HTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDA
PLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATAS
LGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTP
ARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSAL
VCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTR
CLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATE
TVVATPVAAAAAAADGGAGAANVVGGGERFPPQPHAWERFTSSSIDGLPN
GIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWV
SLARGAGATVGGREGGGGGDCCRREEVRFWGTALAPGRGAAVFEARMTTS
EDGYGREQRSGTTQLNA*

mRNA from alignment at chr_00:1974792..1980699-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5908bp|location=Sequence derived from alignment at chr_00:1974792..1980699- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
AAGCACCACGGCTCCAGGGCCCCCCACTGCAAGCTGGCAGCGGACAAACC
ATGCCCACCTTCAACGCAAATAAAAACAGAAGAGGGACTGGGAAGAAGAG
AAGAAACAACAGATCCCGACCAACGGTAGGGCATGTTCTCTTTGACATTT
TTTTTTTTTGCTTCTACGTTGCCGCCGTGACAGTCAAGAAAATCGAGACA
GCGCGGTAGAAATGCATATTCATACCAGGAGCAGAGTATGTGGGGAAGTT
AGTGCTTTACAGCTGCCCCAAACGTGTCCGCGTTGCTGCAATTTTGCCCT
GTAGCGGTGTTTCGCTTCAAAGAATATGATCAGACTACTGCTGTACTGCC
CGAGCATGAGCATTCACTACAGTAGTCACTGTACTTCAATAACTGCTGTG
CCGCGATCAAGCGAATGGTTGCCACGCTTTATCCTATCGTTTTGTAACAA
CCCCCACCTGCGTTCGTACTTTTCGCTGCTGCCACACGTATGAAGGAGAC
TGCGCCCCATATCCTGGCCGCACTGGAGGCTCAGCGGGCCAGAACTGCGC
AGCAGGTGCCTGCACCGCCATCAGCAGCAGCAGCAGCAGCAGCAACGACG
ACCCCGGGAAGCGGCAGTCCTCCACAGCCACCGCCGCCGCTCCCCCAAGC
ATTACCGGGCCACATGTTCGACCCTGCTCGCAACCGATACTTCCGGTGTG
TCAAGGACTGCCAGGGGACCCCCGGGATAGTAGTGGCCGACAGCAAGTCG
AAGCAAAACCTCAGAATCAAGATCGGCAGTGGGAAAAGCAAAAGCTCTGG
GCCGCCGACCCCGCCGGCGCGAAGCAGCAAGGCCGGCGGAGGCGAAGCAC
GGAGTAACTTCGTGGCAAATCACGGTGGCAATGGCCGTACTTATGTCGCT
GTCGCTGCCTCTGCGGGATGCCCTGCGGATGCTGCCCCTTGGGCCGGGCA
CTTGGATAGCCGTTCGGTCGCGAGAAGAGGGCTCCACCCGTACGCCATGA
GGAGTCGACGTGGGCTTTGGGGTTGGGACGATAGAACCCGGAGTTCGTGC
GGTAAGGTCCTAGTGGACGTGAGGAGGAAATCTGCCGTGCTGCGGTACAG
CAGACGAGTTAAATCACCCCCCATCGGCCGCCAAATCCAGATTACGAATC
ACCACGCACGGCCGTTGCAACACCCAGAACACAACACCTCTACCCCCCCG
CTCACCCCGTGAAAACTGAGACAGATAGTTCTCCTGCCTATGAGGTTCGA
AGGTGGAGTGGTCGAGGAAGGGTAGACTCTTGTGGCGTGGAGCTGTCAAA
CTGCTGTATTGGGGATGGGGGTTGTTTTTGCGGTATATCCTGTGAGCTTG
TGGACTTCGGTCCTAGAGTGAAGAGTGTACACGCTATAGGATGTCCGCTG
CATTATGGGTAGTTCGAACGCTCTTTGCAACTAGAAGTATGAGCTACTCC
GTCTGAGTTTTCCACTTGGAGTGTACAAGAAAGATTGTTCTTCAAGTGTA
TCACACGTGAAGCGCGACTTGGTTCCCTATGTGTGGCGCGCCTGTTGTGT
ACAAGCGGGCAAAGATCGACCCCCTATGCTTTTAAGTATAGTCGTGCCTG
CCGAAAGTGAAACCTTTGGTTAGCCTGGATGCCCAATCAACTCATGGCAC
ATCTGGTTTGGCACAGCAAAATGCAAGGATGACGCCCAGCTTCTGGTTCA
TCCTTGTAAAACGTCGATAGCCTGGTCCGACGTATATCGCTCCGTCCCGG
CAGTTGTGTAGGGCTGCGAGGTCTACGGCCTACCGACCACGGCCTGCGTT
TACAAGAGCACCCCCCCCGGATTCGCGTCCCCGCCCATCGCCCGGTTTGC
CGCTCTCGCAGGCTTGCCGGCCGGTCCGGAACGACTGCGCCGGATAGGGC
TCGAGTCGGCAGTCTCCAGCTCTCGTTTCCGGGTTCGGGACCACGCGCCC
TGGGCGCACACCAGCGTTATCCACGGCGCCGGTTACTCGGCCGTTGACTG
GGATGCCGGGCGGGGGGTCCTCATCGCTGGCAGAAAGAACGGCGGGCTTG
CAGTGATGATGACCGGGGCCCCGATGAATGTCGGCGACGGGGGTGGTGGT
GATGCCCCGCTTCGGGGGTTCGCTCCACGGTGGGGCGGGGTTCGGAAAGT
GGAGGAGCGCGTGCTCTTGACAGCTGCATCAACACGCTGGAGGAGCCAGG
TCGGTTGGACAGGTTTGGTTGTTGTGCAGCGTAGGGAGAGAGGGTGGCTC
ATCCGAGGACCCTACTTTGCTTTTGTACTTAGCTTTCCAGCTCCGTGGAC
GACCACGTTTGCGAAACACTATACCCCTACCACGATGCGCGTTTGTTGCG
CCAAGGTTTCCGACATCAAGTTCCGTGGACACGCAGAGGAATGGGCCTGC
GCGACAGCGTCGTTGGGCGGCGGTGGCCAGCCAGGCGGGGTGACTGCAAG
GTTTTGGACCGGACGTGGGGATTTGGTTAACGTTTTTTCCGAGGCGCGCC
TGGTCGATCAACAGGTGGGATGGTTATATTTGAGTCGGGTAGTGGGGGTT
AGAGCTGTGGTGAATGTGCCGTTGCTTGTGCATTACTCGGCCCGTTCTTT
TGGATCCCCTCCCGCCGCACGTGGTTATGGCACCCTTTGGTGTGATTGAG
GCCGTGACTTGATTGGCCGACACGGCTTCCCGTGCATTTCACCGTTGACG
AACGGGTGGCGATCAGTCAACGGATACGTCGGCTTGTGCCTTGCGGACGA
AATTCACGGGTGCCGCCATGCAGCATCTCAAGACACCGGGGCTCGTTGCA
GATCGATTAAACGACGGACAGCGGAAAAGCCCAAGGCTGCACCCGACTCC
CTTCGGCCATCTACCCGGAAACATGACTGACCCAGTCCAACTTTCCTGAA
CGATCAACATGCTGCTGTGACGCGTCTTGTGTTTGTTTCATTCGAGATCA
GCTGCACCGGGGCTCCGCCTGGTGCACGGAGTGGGACCCCTTAACCCCGG
CGAGACTGGCCATCGGGCCGAGCACCTGCAGCCCCGTGGTGTTCTTCGAC
GTAGATCAGCAGCGACCGATACCGATAGCCAAGGTAAGCAAGAAATTTGC
TGCAACCTGTGGTAGACAGGGAGAGTGTCCTAGAAACGGGTGTGGTCAGC
AAGTCCTAACTGGAGCACTCGCGAGAGAGAGGAGAGTCGGGCACAGGCTT
TTCCCCGCTACCTTAGACTTTTTTTGCTGCGAGTGCCGGGCGGGTTTGTG
AGGTCCCGTTTGACGGTACCCCCGCCTTTCAGGGTTGGCCTACCGTGTGT
CGCGTTGCTGGTATCGACCTCTCTCAACATGTCCGGGCGTTCCAAATTGC
CCTCCAACGACCTTTCTTCGGTCTATTTCCCTCCGCGGATCTTCCGAATT
TGACCACCGCCCCCCGCCTTGTACATCCACGCACATCACGTGGCATCTGA
CTCTCTCTGTCTCTGTCTCTGTCTATGTCTATGTCTTATGTCTCTGTCTT
TCCGCGCGTTAATGGCACGGGGTAAATTAGTTGTCGGGGGACGTCTTCTC
CATGTCCTTCCTGCCCGCCGCCGCCCCGGGCGCCGGCAGCGCGCTCGTCT
GCGGCCTGCGCGACGGCACCGTTGTCCTCGTCGACTCCCGACAGCCGTAT
CACCACGGGACCGCGGCCGCCGCCGGGACCCTGCTGGCCCCCCGAGCGGA
CCCCTCCTCTGTAGACCACACGCACATCCTGCGCGACGGGACACGGTGCC
TCGTCAAGGACCGCTCGGGCTGTTTGCAGGTCACCGATCTGCGGTTCTCC
GGGCATAGGGGGGGGGCGCTGGAGGTCCTGGTTCCGCCCGGGGGGCAAGG
GAAGCGGGCGCCTTGGCCAGCGAAGTTCGCCTTGGACGCAACGGAGACCG
TAGTCGCGACGCCGGTAGCGGCGGCAGCGGCGGCAGCGGACGGCGGTGCC
GGCGCTGCCAACGTAGTCGGCGGCGGCGAGCGCTTCCCACCTCAACCCCA
TGCTTGGGAAAGGTTTACCTCTTCGAGTATCGACGGCCTCCCAAACGGTA
TCGGCGGGAGCATCTACGACGTCAGGAACGATCACGGCGGCGGGTACGGC
GCCGAGCCGGTGCCTGCGGAGGGGGACAGCGTGCGACTGCTGAACGTGTC
TTCGGGGGAAGTGCTTAACGACATCCAGACTCCCTGGCCGTGGGTGTCAC
TCGCGAGGGGAGCAGGAGCAACGGTAGGCGGTCGGGAGGGCGGCGGCGGC
GGCGACTGCTGTCGCCGCGAAGAGGTCCGGTTTTGGGGGACAGCGTTGGC
ACCCGGGCGCGGAGCTGCTGTGTTTGAGGCTCGCATGACCACGTCTGAGG
ATGGATACGGGCGGGAACAACGAAGTGGTACAACTCAGCTAAATGCGTAG
CTCGGCAGGGTGCTACGTGATGCCCCTCCTTGTCCATTTATCGCGGGTGA
GACCGCTCGCAATGGTATATGCCAGCGTCAGCGGCGTACCCCCGCTGGAA
GCTGGGTCGTGAAGGACATACGGAGTAATTTGGACCAAAAGCACAACAGG
TGTCAAGACCAGCCTGGCGAGGGGATACTTCCTTCCCTACGTTGCAAAAG
CATTAGCCACAAGAACGCGTGTGGGTCAGTGAGGTCGGTACGCGGAAGGT
ACATATGTGTAGACCCCGGGGTGTCGCTGGAAATAGTGCATGTGAAACAG
TGCCAATATCCAGAGAGGACAGTGGGGAAAGCGCCAGTCGAATATACGCG
CTTAGTCTATGTGTTCGTCAGGTGGAAACTTGCCGGGAATTGAACACTTG
TGGTGTCCAGCCCGGCGCCACAGACGGCTGCAGCGCTCAGGCCGAAGAGC
TCGCTGCTCTATGTACGATGTACACGACATGCGTTGAAGAGGGTACACGA
TGGGTATTTTGGTAGCGGACTATTTCAGTTGTCTTTAGCGCATGTCTCGT
TGGCAGCTTGTCCCACCCCCTTCCGAAAAGGGTTTTCCATACCGAAGGCC
CCCTCAATAACCGCAGCAGTAGCGCTCCGCATCTGCTGCAGTGCCCCAAG
TTGAGAGGCCCATGAGGTTCACACCGTCATGGTCGATGTAACCCTACGTT
TACAGTCATGGTAGCGGAGCTGCTGCAGTTGTTCGCACGAAGCCGGCGCC
ACAAAGAACACCACCGCCGCTGCTTGTGCGTTGGACGCCTACTAATATCT
TCTTGTTCGAATGCATGATGACCAGATAAAGCTGCACGTGACTTGCCCTG
CATGCAAAGTTGTCCACTAAATTGGGGGGGGTCGCGCAACAGCTGAAGTT
GGATTCATCAGTCTTCGGGCCTTCCTTGAGTACCAAGTCTGTGTTGATAC
GCCCAAATATTCTGAGCACGAGTCTACAATTTTCGGAACATGTTTGAACC
CACCACCCGGGTTTACACAGGAAGAACCCTGGAGCTTTTTTTCGCTCCAC
CTTTCCCGATGCGGTGCTTGGTTTTTGGACGCGATGGGGGTTCAGTAGTA
TCTGCCCTCGCGTTGTGCTGCTCACGGCCGTACGCTTTCCGCCTCTACAT
GGCGATGTCTCTACTCCAACGGGATTTCGAACCCGCCATCTGGCGACGCG
AAGGCAACGAGGTTGCCAACTGAGCCATCGGGGCGGCCGGCGTCATGCGT
GTCCGGAGGTATGTGTGTGCTAAATTCCGGCTGCCTTTCGTTCTCGCTTC
TCTTTCCTCTGGAATTGTTCCAAGCCTCAGCCAAGCGCCTCACCGCCCAA
GTCCCGCAAGGAGAAAGATTGCATCATGTGTAGCGTTGCGATGCGATGTA
CAGCAGGGTTCCACAAGCCCCACCAAAACGAATGTTGCAATGCATACATA
CATGGATTATTTTCTCGCGGACGGCAGAGTGTCTATTGTACGTGATGTAT
AATATCCA

Coding sequence (CDS) from alignment at chr_00:1974792..1980699-

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1554bp|location=Sequence derived from alignment at chr_00:1974792..1980699- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAGGAGTCGACGTGGGCTTTGGGGTTGGGACGATAGAACCCGGAGTTC
GTGCGGCTTGCCGGCCGGTCCGGAACGACTGCGCCGGATAGGGCTCGAGT
CGGCAGTCTCCAGCTCTCGTTTCCGGGTTCGGGACCACGCGCCCTGGGCG
CACACCAGCGTTATCCACGGCGCCGGTTACTCGGCCGTTGACTGGGATGC
CGGGCGGGGGGTCCTCATCGCTGGCAGAAAGAACGGCGGGCTTGCAGTGA
TGATGACCGGGGCCCCGATGAATGTCGGCGACGGGGGTGGTGGTGATGCC
CCGCTTCGGGGGTTCGCTCCACGGTGGGGCGGGGTTCGGAAAGTGGAGGA
GCGCGTGCTCTTGACAGCTGCATCAACACGCTGGAGGAGCCAGGTTTCCG
ACATCAAGTTCCGTGGACACGCAGAGGAATGGGCCTGCGCGACAGCGTCG
TTGGGCGGCGGTGGCCAGCCAGGCGGGGTGACTGCAAGGTTTTGGACCGG
ACGTGGGGATTTGGTTAACGTTTTTTCCGAGGCGCGCCTGGTCGATCAAC
AGCTGCACCGGGGCTCCGCCTGGTGCACGGAGTGGGACCCCTTAACCCCG
GCGAGACTGGCCATCGGGCCGAGCACCTGCAGCCCCGTGGTGTTCTTCGA
CGTAGATCAGCAGCGACCGATACCGATAGCCAAGTTGTCGGGGGACGTCT
TCTCCATGTCCTTCCTGCCCGCCGCCGCCCCGGGCGCCGGCAGCGCGCTC
GTCTGCGGCCTGCGCGACGGCACCGTTGTCCTCGTCGACTCCCGACAGCC
GTATCACCACGGGACCGCGGCCGCCGCCGGGACCCTGCTGGCCCCCCGAG
CGGACCCCTCCTCTGTAGACCACACGCACATCCTGCGCGACGGGACACGG
TGCCTCGTCAAGGACCGCTCGGGCTGTTTGCAGGTCACCGATCTGCGGTT
CTCCGGGCATAGGGGGGGGGCGCTGGAGGTCCTGGTTCCGCCCGGGGGGC
AAGGGAAGCGGGCGCCTTGGCCAGCGAAGTTCGCCTTGGACGCAACGGAG
ACCGTAGTCGCGACGCCGGTAGCGGCGGCAGCGGCGGCAGCGGACGGCGG
TGCCGGCGCTGCCAACGTAGTCGGCGGCGGCGAGCGCTTCCCACCTCAAC
CCCATGCTTGGGAAAGGTTTACCTCTTCGAGTATCGACGGCCTCCCAAAC
GGTATCGGCGGGAGCATCTACGACGTCAGGAACGATCACGGCGGCGGGTA
CGGCGCCGAGCCGGTGCCTGCGGAGGGGGACAGCGTGCGACTGCTGAACG
TGTCTTCGGGGGAAGTGCTTAACGACATCCAGACTCCCTGGCCGTGGGTG
TCACTCGCGAGGGGAGCAGGAGCAACGGTAGGCGGTCGGGAGGGCGGCGG
CGGCGGCGACTGCTGTCGCCGCGAAGAGGTCCGGTTTTGGGGGACAGCGT
TGGCACCCGGGCGCGGAGCTGCTGTGTTTGAGGCTCGCATGACCACGTCT
GAGGATGGATACGGGCGGGAACAACGAAGTGGTACAACTCAGCTAAATGC
GTAG

Synonyms

The feature 'Ec-00_001760.1' has the following synonyms


Synonym
Esi0013_0147
Esi_0013_0147