Ec-00_001760.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_001760.1
Unique Name	Ec-00_001760.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	518

Homology

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BLAST of Ec-00_001760.1 vs. uniprot
Match: D8LEC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC8_ECTSI)

HSP 1 Score: 1009 bits (2609), Expect = 0.000e+0
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0

Query:    1 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA 517
            MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA
Sbjct:    1 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXNVVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLNA 517

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BLAST of Ec-00_001760.1 vs. uniprot
Match: A0A6H5JSB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB6_9PHAE)

HSP 1 Score: 914 bits (2363), Expect = 0.000e+0
Identity = 458/519 (88.25%), Postives = 465/519 (89.60%), Query Frame = 0

Query:    1 MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATETVVATPVAXXXXXXXXXXXXXN---VVGGGERFPPQPHAWERFTSSSIDGLPNGIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVGGREGXXXXXXXRREEVRFWGTALAPGRGAAVFEARMTTSEDGYGREQRSGTTQLN 516
            M SRRGLWGWDDRTR SCGLPA PERLRRIGLESAVSSSRFRVRDH PWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVG G GGDA LRGFAPRWGG RK EERVLLTAAS RWRSQVSDIKFRGH  EWACATASLG GGQPGGVTARFWTGRGDLVNVFSE RLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQR IP+AKLSGDVFSMSFLPAAAPGAG+ALVCGLRDGTVVLVD RQPY H T AAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRF GHRGGALEVLVPPG QGKRAPWPAKFALDATETVVATPVA                 VVGGGERFPP PHAW+RF+SS+I GLPNGIGGS+YD RNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATV G E        RREEVRFWGTALAPGRGAAVFEA MTTSEDGYGREQ SG+TQ N
Sbjct:  229 MSSRRGLWGWDDRTRRSCGLPARPERLRRIGLESAVSSSRFRVRDHVPWAHTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGGGDGGDAQLRGFAPRWGGARKEEERVLLTAASRRWRSQVSDIKFRGHGAEWACATASLGDGGQPGGVTARFWTGRGDLVNVFSEGRLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRVIPVAKLSGDVFSMSFLPAAAPGAGNALVCGLRDGTVVLVDPRQPYRHRTPAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFFGHRGGALEVLVPPGRQGKRAPWPAKFALDATETVVATPVAAEAAAAARADGGTGAATVVGGGERFPPHPHAWQRFSSSTIGGLPNGIGGSMYDFRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWVSLARGAGATVDGWE-EDGGGCCRREEVRFWGTALAPGRGAAVFEACMTTSEDGYGREQPSGSTQQN 746

The following BLAST results are available for this feature:

BLAST of Ec-00_001760.1 vs. uniprot

BLAST of Ec-00_001760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEC8_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JSB6_9PHAE	0.000e+0	88.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 49..329 e-value: 2.2E-7 score: 32.2
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 52..334

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1976300..1979703 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001760.1	Ec-00_001760.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 1974792..1980699 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_001760.1 ID=Ec-00_001760.1|Name=Ec-00_001760.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=518bp
MRSRRGLWGWDDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWA
HTSVIHGAGYSAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDA
PLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATAS
LGGGGQPGGVTARFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTP
ARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSAL
VCGLRDGTVVLVDSRQPYHHGTAAAAGTLLAPRADPSSVDHTHILRDGTR
CLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAPWPAKFALDATE
TVVATPVAAAAAAADGGAGAANVVGGGERFPPQPHAWERFTSSSIDGLPN
GIGGSIYDVRNDHGGGYGAEPVPAEGDSVRLLNVSSGEVLNDIQTPWPWV
SLARGAGATVGGREGGGGGDCCRREEVRFWGTALAPGRGAAVFEARMTTS
EDGYGREQRSGTTQLNA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf