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Homology
BLAST of Ec-00_001590.1 vs. uniprot
Match: D8LEB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB2_ECTSI) HSP 1 Score: 655 bits (1690), Expect = 2.540e-235 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1
Query: 61 GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 1209
GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct: 13 GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 395
BLAST of Ec-00_001590.1 vs. uniprot
Match: A0A6H5K876_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K876_9PHAE) HSP 1 Score: 540 bits (1392), Expect = 3.160e-189 Identity = 347/445 (77.98%), Postives = 358/445 (80.45%), Query Frame = 1
Query: 1 MGKKNKGKKRLSERNASTKPGPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXX------------------------------------------PDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 1209
MGKKNKGKK+ KPGPS PSPRLSADAAEWHPPSFLAKT+ENESE+DQQPAEVGEL+GESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAI SDE TAAVSPPA XXXXXXXXXXXXXXXXXXXX PDSAQGD T SDE TP+EVL TEDVKS SVEVVGDDEAQPDGVE DEATP PALDDAPSAPSTSED GPRNVVPDAALVLED AGVAP EVMATA CTAAD ACCEK EPA+AGL+ET TAVA TAD QGTP+DG TV EATAAD DAVNGSKPEVA SGATGQ DK PGGEEGG+GTRG +QLTDA SSDSAE SRSDPDLSYGGGKGN L GKFLLGD+GG GGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct: 1 MGKKNKGKKKAXXXXXXXKPGPSTPSPRLSADAAEWHPPSFLAKTIENESEEDQQPAEVGELQGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAIASDEPTAAVSPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSAQGDSTTASDEPTPLEVLTTEDVKSGSVEVVGDDEAQPDGVERDEATPVPALDDAPSAPSTSEDAGPRNVVPDAALVLEDGAGVAPGEVMATAYCTAADPINACCEKAGEPALAGLSETPTAVA-TADCQGTPTDGRTVEEATAADTDAVNGSKPEVA-SGATGQHDKVPGGEEGGEGTRGSEQLTDAVSSDSAENSRSDPDLSYGGGKGNALGGKFLLGDEGGYKGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 443
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 1212 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-00_001590.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=404bp MGKKNKGKKRLSERNASTKPGPSAPSPRLSADAAEWHPPSFLAKTVENES EKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGST PAPLPSSAPAITSDEQTAAVSPPADGSSSVPGDEQEREDGSTPAPPDSAQ GDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPAL DDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADIST ACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNG SKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPD LSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGL RRR* back to topspliced messenger RNA >Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1212bp|location=Sequence derived from alignment at chr_00:1810913..1814897- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCAAGAAGAACAAGGGAAAGAAACGGTTGTCGGAGCGCAACGCCTC GACGAAGCCCGGCCCAAGCGCACCGTCACCCCGCCTTTCGGCTGACGCTG CGGAGTGGCACCCGCCGTCGTTTCTGGCGAAAACGGTCGAGAACGAGAGC GAGAAGGACCAACAACCGGCGGAAGTCGGCGAATTGAAGGGCGAGTCACC ATCCGCGGCAGCGACGGCGGCAGAGGGTGTAGAGCAAGAGCATTGCCCCG GGTCGAACACGCCTCCTGGAGACGACGAGGGGCGGGAGGATGGATCGACG CCTGCACCGCTTCCTAGTTCTGCGCCTGCAATCACATCCGATGAGCAAAC AGCAGCCGTTTCTCCGCCGGCTGATGGTAGTTCATCGGTTCCTGGAGACG AACAAGAGCGGGAAGATGGATCAACGCCTGCACCACCTGACTCCGCCCAG GGTGACCCCGCAACCGTCTCCGATGAGTCAACACCAGTTGAAGTGTTGGC GACCGAGGATGTCAAGAGCGATAGCGTGGAAGTTGTAGGAGATGACGAAG CGCAGCCAGACGGGGTGGAGAGCGATGAGGCTACGCCAGCACCTGCTTTG GATGATGCACCCTCCGCGCCGAGCACCTCAGAAGACGAGGGTCCTCGCAA TGTCGTGCCGGATGCAGCACTTGTGCTAGAGGATTGCGCCGGCGTAGCGC CCGACGAGGTGATGGCCACGGCCAACTGCACCGCGGCCGACATCAGCACG GCCTGCTGCGAGAAACCCGAAGAGCCGGCTGTGGCGGGGTTAACGGAGAC AGCTACTGCTGTCGCCGCCACCGCCGATCGCCAAGGTACGCCCTCCGATG GGTGCACGGTAGCAGAGGCAACGGCCGCGGACGCTGACGCCGTCAATGGT TCGAAGCCTGAGGTGGCGTTGTCGGGAGCAACTGGACAGGAAGACAAGGC GCCTGGAGGTGAGGAGGGTGGAGACGGCACCCGGGGGGGTAAGCAGCTAA CGGACGCGGCGTCCTCCGATTCCGCGGAGACCAGTAGGTCAGACCCCGAC CTCTCGTACGGTGGTGGCAAGGGCAATGGCCTTGTCGGCAAGTTCTTGTT GGGAGATGACGGCGGGTGCGGGGGGGGGCTCTTGGACGACCCGAGGTGGA GGTGGGGCAGCGTCGTGGCGGTGGCCGCGGTGGTGCTGCTGATTGGCCTG CGTCGTCGATGA back to topprotein sequence of Ec-00_001590.1 >Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=404bp
MGKKNKGKKRLSERNASTKPGPSAPSPRLSADAAEWHPPSFLAKTVENES EKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGST PAPLPSSAPAITSDEQTAAVSPPADGSSSVPGDEQEREDGSTPAPPDSAQ GDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPAL DDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADIST ACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNG SKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPD LSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGL RRR* back to topmRNA from alignment at chr_00:1810913..1814897- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3985bp|location=Sequence derived from alignment at chr_00:1810913..1814897- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGGCAAGAAGAACAAGGGAAAGAAACGGTTGTCGGAGCGCAACGCCTC
GACGAAGCCCGGTGGGTCTCATGGTGTTGTCGGTGCTGCCCTGTTTGCGT
GTCGTTTTCCAGAGGGGAGCGGAAACATGTCGCAAGTGCAACAACATGCG
TCGTTGCCGTTCAGAGCACACAGCAAGTAAGTGAGCTCGACCACAACCCT
CCTGACCAACCCCGTACTCCGCTAGATTTCAGAGCAGAAGAAGCGTGTGC
ACTTAGGCCATAACAAAGAGATACATCGCTTGCCAACCGCACATCGTGTT
CTCTCACACTGGTATTTCTTTGTACATCGTTCTGCTCGCTCTCGGGTCTC
TCCAAAACACAATAATGCGCGCGGCCTCCCAGAGGGCAACAAAAATGCGG
GAACACTACGAACGCGGATGTGCATATGCATACGTAACTCAGACCTCAGA
TATAAGATCGCCTCGGGCGTGCTACCGCACAATTCTGACCCAGCACAACA
GTTTATAGATCACTCCAATGTTCATCTAGGGGCACCAAGATTGAGATTAA
CAAACTCCACGTGCTGTAAGTTGTTGATTTTGGTGTCAAGACAACAACAA
CAGCAACAAACGCGCTGTGAGGCTGATCATCAGCGCACAGTCCGCAAATG
TCAATATGTGGTCCAGCAATAGACATGGTCTCAAGCGGATGCATACGTGC
GGCGTAACCCTGCACCCGTGCGGAGAACTACTTATTGTAGCTCCCACCGT
GGGATCAATCGGCGCAAATTTTGGAGACAAGACCAAGTGTACCGCAGAGA
CTTAACGGATTGAAGGCTCGAGTCGAATGATGCGGTGGTGGATGTATAGA
GGAAGATAGACGGATTCGGTCCAAAACTTGCGTGAGCGTACAAGCAGCGC
GCTTATGCCCCTTGCACGCCGCCGGCAATAGGGAAGCCTCCACGATGATC
TCCATTGGTCTCGTGGTCCCGCAGCATTCTGAATTGTGGTGCAACGTGAA
GCGCGGGTGGGAGGTGGGAGTACAGGGTTCGGGCTGAAACTGCTGCACGA
TACATAGTTTTGTGACATTCGTCGTGTTGCACGGCGCACGGCGTCGGCCG
TGCCGCCGTGCCTGTTGTTGTGAATCTCCGCTCCGTCGCCTAGCGGCACC
TCCTTCCCTGATTCCCTGGGATTAAAAAAAAAACATGAGGAAGTCGTATT
GTTGTTCAGACGGGAACTGCGTCACCCAGTTCTACAACTTACGGCCGCGT
GTGTCGCGTACAACGTGGCCGTCTTTTCTCTGGAATTGTGGAATTGTACC
CTGAGTTTTTCGGAAATCTACTTTGACGTGACGGGATGCACATGGGACCT
TTTCGTCGCCGAATTTCTCCGCAGGAAGCACTTCCCGCTCGCACCAAAAG
CCCTCGAATCTTGAAATCTTCCTGCTCCCAACAAAAGTTGGAAACCGAAA
TCCTAGACACACTCACCCCTCCATAGGTTGATTGAAAGCAGCATCGTTGA
AAGGCCGACCGAAACAGAGCGTGCGCCCAGCTTGCCACGTTCCAGAAGAG
TGATGGGTGGATGTGGCCGCAGAGAAACCGAGGAGGGGCGATCGAAGGGT
CAACAGCTGTGCTACTTGACTTGTCCGTGGTTGCAACTGCTGTACACGTC
GATGAAGACTATTTGATTTTTATCAGATCGACAGCTGCAACACAAAGAGC
CGAACGTCAGACGGGATGCACACCAGAGAAAAGTAATTCCGGCAGCGCAC
AGCAATATTCTTGGGGCATTTTGTGATACGGCAGGGTGAGAGTGGGTGTC
GACCAATCAGCTACGCGGGTTTCACGCGGATCAACAGAGTACTTGCCCAG
CTGCGTCGTTGTTGTGTTTTACCTACACATTCCTTGTTGTCTTTGGTACG
TGTGTGTCCGGATAAGTAAGAAAGCACCGCAGAAGACCCCGGATTCCCAG
GTTTATGAAACACAAAGGGTCGCACCTCTTATCATATTACGAAAAATAGA
TACACACACAGAAAGACTACCTGTTCGACATACGAGATACATGCTCCGGC
TCGCTGGACCCGAGGTCACGCTGGACCAAGCACGTATGGCCGCGGGAAGA
GATATGCGAACCCACGAAGAGACAAGAAACAAGGGTAATGGCCGCGCGGC
GTTGATCGTTCAATGGTCTCAGCAAATCGAGGCGCTATACCATAACAAAC
AAGTGCCGTCATGGTGTGAACGCTTGTACGTATATGCATATATGCATAGC
TAACCCAATCCTGTGTTTCAACCATGCACAGCATTTTTCTGCCACAAAGT
AATTCATGCGCCCAACCCACACGAGCTTCTAGAGGGTTTACCAAAGAGCC
CCGTTTAAGAGTGTTTTTTCTTGTCGCCCCCTGTATTAGCTTACGTTTTC
CCTCTACATGCCAGAGTTTTTTTTCTTTTCAAATCCTCTTTTGTAGAGGG
CCTCAACACTTTTTGAAAATGCCACATTGTGAACTTTATCTTTTTGACTA
CATGGTAGAGAGTTGAGTAGGCCAACTACAAGAAACGTTTTTGGTAATCC
CGTGTTATATAGCCTCTAGGGAAGACCCGTTGTAAGAATCATGCCCGCAT
GTCCAACCCTGGGAGCTGCAGCTCCCCCCATATTCTACGTTGAACTACCG
TGTAGATCCTTGTACTGAAATCCCGCAACAACGCTGACTTCGCTGGGGTT
TCACCTCGAGGCCCTGCCAGCGCATGTGAACTGAAGGGCCCGGGAGACCA
AGCTCATCACGCCTTGCTGCTGCCATATCCCTTGTGCACTGCCCCCCATG
TTCGGCGTGGGCACCTACTACGACGCGGCTTCAGGCCCAAGCGCACCGTC
ACCCCGCCTTTCGGCTGACGCTGCGGAGTGGCACCCGCCGTCGTTTCTGG
CGAAAACGGTCGAGAACGAGAGCGAGAAGGACCAACAACCGGCGGAAGTC
GGCGAATTGAAGGGCGAGTCACCATCCGCGGCAGCGACGGCGGCAGAGGG
TGTAGAGCAAGAGCATTGCCCCGGGTCGAACACGCCTCCTGGAGACGACG
AGGGGCGGGAGGATGGATCGACGCCTGCACCGCTTCCTAGTTCTGCGCCT
GCAATCACATCCGATGAGCAAACAGCAGCCGTTTCTCCGCCGGCTGATGG
TAGTTCATCGGTTCCTGGAGACGAACAAGAGCGGGAAGATGGATCAACGC
CTGCACCACCTGACTCCGCCCAGGGTGACCCCGCAACCGTCTCCGATGAG
TCAACACCAGTTGAAGTGTTGGCGACCGAGGATGTCAAGAGCGATAGCGT
GGAAGTTGTAGGAGATGACGAAGCGCAGCCAGACGGGGTGGAGAGCGATG
AGGCTACGCCAGCACCTGCTTTGGATGATGCACCCTCCGCGCCGAGCACC
TCAGAAGACGAGGGTCCTCGCAATGTCGTGCCGGATGCAGCACTTGTGCT
AGAGGATTGCGCCGGCGTAGCGCCCGACGAGGTGATGGCCACGGCCAACT
GCACCGCGGCCGACATCAGCACGGCCTGCTGCGAGAAACCCGAAGAGCCG
GCTGTGGCGGGGTTAACGGAGACAGCTACTGCTGTCGCCGCCACCGCCGA
TCGCCAAGGTACGCCCTCCGATGGGTGCACGGTAGCAGAGGCAACGGCCG
CGGACGCTGACGCCGTCAATGGTTCGAAGCCTGAGGTGGCGTTGTCGGGA
GCAACTGGACAGGAAGACAAGGCGCCTGGAGGTGAGGAGGGTGGAGACGG
CACCCGGGGGGGTAAGCAGCTAACGGACGCGGCGTCCTCCGATTCCGCGG
AGACCAGTAGGTCAGACCCCGACCTCTCGTACGGTGGTGGCAAGGGCAAT
GGCCTTGTCGGCAAGTTCTTGTTGGGAGATGACGGCGGGTGCGGGGGGGG
GCTCTTGGACGACCCGAGGTGGAGGTGGGGCAGCGTCGTGGCGGTGGCCG
CGGTGGTGCTGCTGATTGGCCTGCGTCGTCGATGA back to topCoding sequence (CDS) from alignment at chr_00:1810913..1814897- >Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1212bp|location=Sequence derived from alignment at chr_00:1810913..1814897- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGGGCAAGAAGAACAAGGGAAAGAAACGGTTGTCGGAGCGCAACGCCTC GACGAAGCCCGGCCCAAGCGCACCGTCACCCCGCCTTTCGGCTGACGCTG CGGAGTGGCACCCGCCGTCGTTTCTGGCGAAAACGGTCGAGAACGAGAGC GAGAAGGACCAACAACCGGCGGAAGTCGGCGAATTGAAGGGCGAGTCACC ATCCGCGGCAGCGACGGCGGCAGAGGGTGTAGAGCAAGAGCATTGCCCCG GGTCGAACACGCCTCCTGGAGACGACGAGGGGCGGGAGGATGGATCGACG CCTGCACCGCTTCCTAGTTCTGCGCCTGCAATCACATCCGATGAGCAAAC AGCAGCCGTTTCTCCGCCGGCTGATGGTAGTTCATCGGTTCCTGGAGACG AACAAGAGCGGGAAGATGGATCAACGCCTGCACCACCTGACTCCGCCCAG GGTGACCCCGCAACCGTCTCCGATGAGTCAACACCAGTTGAAGTGTTGGC GACCGAGGATGTCAAGAGCGATAGCGTGGAAGTTGTAGGAGATGACGAAG CGCAGCCAGACGGGGTGGAGAGCGATGAGGCTACGCCAGCACCTGCTTTG GATGATGCACCCTCCGCGCCGAGCACCTCAGAAGACGAGGGTCCTCGCAA TGTCGTGCCGGATGCAGCACTTGTGCTAGAGGATTGCGCCGGCGTAGCGC CCGACGAGGTGATGGCCACGGCCAACTGCACCGCGGCCGACATCAGCACG GCCTGCTGCGAGAAACCCGAAGAGCCGGCTGTGGCGGGGTTAACGGAGAC AGCTACTGCTGTCGCCGCCACCGCCGATCGCCAAGGTACGCCCTCCGATG GGTGCACGGTAGCAGAGGCAACGGCCGCGGACGCTGACGCCGTCAATGGT TCGAAGCCTGAGGTGGCGTTGTCGGGAGCAACTGGACAGGAAGACAAGGC GCCTGGAGGTGAGGAGGGTGGAGACGGCACCCGGGGGGGTAAGCAGCTAA CGGACGCGGCGTCCTCCGATTCCGCGGAGACCAGTAGGTCAGACCCCGAC CTCTCGTACGGTGGTGGCAAGGGCAATGGCCTTGTCGGCAAGTTCTTGTT GGGAGATGACGGCGGGTGCGGGGGGGGGCTCTTGGACGACCCGAGGTGGA GGTGGGGCAGCGTCGTGGCGGTGGCCGCGGTGGTGCTGCTGATTGGCCTG CGTCGTCGATGA back to top
Synonyms
The feature 'Ec-00_001590.1' has the following synonyms
Synonym |
Esi0013_0119 |
Esi_0013_0119 |
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