Ec-00_001590.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_001590.1
Unique Name	Ec-00_001590.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	404

Homology

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BLAST of Ec-00_001590.1 vs. uniprot
Match: D8LEB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB2_ECTSI)

HSP 1 Score: 655 bits (1690), Expect = 2.540e-235
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0

Query:   21 GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 403
            GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct:   13 GPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXXPDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 395

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BLAST of Ec-00_001590.1 vs. uniprot
Match: A0A6H5K876_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K876_9PHAE)

HSP 1 Score: 540 bits (1392), Expect = 3.160e-189
Identity = 347/445 (77.98%), Postives = 358/445 (80.45%), Query Frame = 0

Query:    1 MGKKNKGKKRLSERNASTKPGPSAPSPRLSADAAEWHPPSFLAKTVENESEKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAITSDEQTAAVSPPADXXXXXXXXXXXXXXXXXXXX------------------------------------------PDSAQGDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPALDDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADISTACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNGSKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPDLSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 403
            MGKKNKGKK+        KPGPS PSPRLSADAAEWHPPSFLAKT+ENESE+DQQPAEVGEL+GESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAI SDE TAAVSPPA XXXXXXXXXXXXXXXXXXXX                                          PDSAQGD  T SDE TP+EVL TEDVKS SVEVVGDDEAQPDGVE DEATP PALDDAPSAPSTSED GPRNVVPDAALVLED AGVAP EVMATA CTAAD   ACCEK  EPA+AGL+ET TAVA TAD QGTP+DG TV EATAAD DAVNGSKPEVA SGATGQ DK PGGEEGG+GTRG +QLTDA SSDSAE SRSDPDLSYGGGKGN L GKFLLGD+GG  GGLLDDPRWRWGSVVAVAAVVLLIGLRRR
Sbjct:    1 MGKKNKGKKKAXXXXXXXKPGPSTPSPRLSADAAEWHPPSFLAKTIENESEEDQQPAEVGELQGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGSTPAPLPSSAPAIASDEPTAAVSPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSAQGDSTTASDEPTPLEVLTTEDVKSGSVEVVGDDEAQPDGVERDEATPVPALDDAPSAPSTSEDAGPRNVVPDAALVLEDGAGVAPGEVMATAYCTAADPINACCEKAGEPALAGLSETPTAVA-TADCQGTPTDGRTVEEATAADTDAVNGSKPEVA-SGATGQHDKVPGGEEGGEGTRGSEQLTDAVSSDSAENSRSDPDLSYGGGKGNALGGKFLLGDEGGYKGGLLDDPRWRWGSVVAVAAVVLLIGLRRR 443

The following BLAST results are available for this feature:

BLAST of Ec-00_001590.1 vs. uniprot

BLAST of Ec-00_001590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEB2_ECTSI	2.540e-235	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K876_9PHAE	3.160e-189	77.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..382
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 401..403
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 383..400
None	No IPR available	TMHMM	TMhelix		coord: 383..400

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1810913..1814897 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001590.1	Ec-00_001590.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 1810913..1814897 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_001590.1 ID=Ec-00_001590.1|Name=Ec-00_001590.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=404bp
MGKKNKGKKRLSERNASTKPGPSAPSPRLSADAAEWHPPSFLAKTVENES
EKDQQPAEVGELKGESPSAAATAAEGVEQEHCPGSNTPPGDDEGREDGST
PAPLPSSAPAITSDEQTAAVSPPADGSSSVPGDEQEREDGSTPAPPDSAQ
GDPATVSDESTPVEVLATEDVKSDSVEVVGDDEAQPDGVESDEATPAPAL
DDAPSAPSTSEDEGPRNVVPDAALVLEDCAGVAPDEVMATANCTAADIST
ACCEKPEEPAVAGLTETATAVAATADRQGTPSDGCTVAEATAADADAVNG
SKPEVALSGATGQEDKAPGGEEGGDGTRGGKQLTDAASSDSAETSRSDPD
LSYGGGKGNGLVGKFLLGDDGGCGGGLLDDPRWRWGSVVAVAAVVLLIGL
RRR*