Ec-00_001440.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001440.1
Unique NameEc-00_001440.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length153
Homology
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BLAST of Ec-00_001440.1 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 5.770e-91
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 2 
Query:  131 MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 586
            MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE
Sbjct:    1 MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.990e-24
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2 
Query:  338 ETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 586
            E    P DK+KV+LFNDNGNTREYV+RSLVQV+G++E+ A+ IM  A+ NGMA VGIW+ E A+AYS  LK RGL++E  P E
Sbjct:   51 EDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTMAHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133
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BLAST of Ec-00_001440.1 vs. uniprot
Match: D8LEA0_ECTSI (Thioredoxin-like_fold domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA0_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 6.660e-18
Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = -3 
Query: 2036 VNSILHMYIGGILASGLDGDATFKDWQDFPDSLLSRTSSAVPWFKGWAAQNAE 2194
            V+    +YIGGILASGLDGDATF+DWQD  D LLSRTSSAVPWFKGWAAQNAE
Sbjct:  210 VDGTPQVYIGGILASGLDGDATFQDWQDILDPLLSRTSSAVPWFKGWAAQNAE 262
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.650e-16
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 2 
Query:  224 AASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPED--KYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 568
            AA    +S  ++A+ V+M  +    P    ++KK    + S +P +   Y++LLFNDN NTREYV+R L  +VGLSE  AF IM +A+ NGMA VG W  E+A+AY+ SL   GL +
Sbjct:   43 AARASSVSHASLASFVSMSTVIENKP----IEKK--GLDNSYQPANGGDYQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLEAHKNGMAVVGSWRYELAEAYNESLNRHGLAS 153
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 1.280e-15
Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = 2 
Query:  140 PLQVLILALVASASTAFVVPAWTAM---RPAAASGRPISALNMAAGVAMPEIKTAGPSIGV--LDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 568
            PL V++  L+ SAS A VVPA   M    PA+AS R + +L  A  VAM       P + V  L   + S +       KYKVLLFNDN N REYV+R LV  + G+S+A A+ +MQ+A+  GMA VG+W  E+A+AY   LK  GLIA
Sbjct:    6 PLFVVLCGLLGSAS-ALVVPARALMPEVTPASAS-RTVLSLRTAR-VAMQVDAPVRPKVDVPQLAPTKPSSDKDNEKAKKYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQKAHKQGMAVVGVWVFEVAEAYCDKLKSGGLIA 151
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A6U6GRI4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRI4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.560e-14
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 2 
Query:  257 MAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPE--------DKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 586
            M A +    +KT G    VLD+ +V    S  PE        + ++V ++ND  NTRE+V+R LVQ+VGL+E TA+  M  A+ NG+A VG +  E A+ Y  +LK+ G+I +  P +
Sbjct:   65 MPATIERAPVKTGGGGPAVLDRPKVEERQSKSPEKERENVGNEAWEVRIYNDGMNTREFVARCLVQIVGLTEMTAYQTMMDAHQNGIAVVGRYVYERAEMYHEALKKNGIICDLVPVD 182
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2R9I8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9I8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.350e-13
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 2 
Query:  362 KYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHP 580
            +Y+VLLFND  NT+EYV+R L+ V GLSE  AF  M QA+ NGM  +GIW +E+A+ ++ +L E GL+    P
Sbjct:   92 RYRVLLFNDPMNTKEYVARQLMTVAGLSENNAFDCMMQAHRNGMGLIGIWMREVAEHHTQTLTEAGLLVSMMP 164
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 4.760e-13
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 2 
Query:  362 KYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 568
            K+K+LLFNDN N REYV+R LV  V   S+A A+ +MQ+A+ NGMA VG+W  E+A+AY   LK+ GLIA
Sbjct:   83 KWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQKAHQNGMAVVGVWVFEVAEAYCDKLKQGGLIA 152
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BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.880e-13
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 2 
Query:  290 TAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE*QTEDR 604
            + G  +G+++KK +  +      D ++V ++ND  NTRE+VSR LVQ+VGLSE  A+  M QA+ NG+A VG +  E A+ Y  +L E G++ +  P +   EDR
Sbjct:   85 STGGGVGLVEKKAMK-DRERTGSDAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQAHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD---EDR 185
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BLAST of Ec-00_001440.1 vs. uniprot
Match: M1VIM3_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VIM3_CYAM1)

HSP 1 Score: 77.8 bits (190), Expect = 9.210e-13
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 2 
Query:  278 PEIKTAGPSIGVLDKKEVSFETS----IRPEDKYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 586
            P     G     L+++ V  +T+    + P  KYK+LLFND  NTRE V   L++ + GLS+  A  IMQ+A+  GMA VG+W  E+A+AY   L+  GL+++  PAE
Sbjct:   80 PSFSPTGGGATTLEREAVREKTTATKGVDPGKKYKLLLFNDEKNTRERVVEVLLKCIPGLSKLDAQSIMQKAHTTGMALVGVWVFELAEAYCDLLRSEGLVSDIEPAE 187
The following BLAST results are available for this feature:
BLAST of Ec-00_001440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE99_ECTSI5.770e-91100.00ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A835ZJP8_9STRA2.990e-2461.45ATP-dependent Clp protease adaptor protein ClpS-do... [more]
D8LEA0_ECTSI6.660e-1881.13Thioredoxin-like_fold domain-containing protein n=... [more]
A0A7S2V4Q9_9STRA9.650e-1643.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0M0LSS8_9EUKA1.280e-1545.64ATP-dependent clp protease adaptor protein n=1 Tax... [more]
A0A6U6GRI4_9STRA5.560e-1438.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2R9I8_9STRA2.350e-1350.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4HUU8_9EUKA4.760e-1357.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S2VY96_9STRA4.880e-1340.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
M1VIM3_CYAM19.210e-1340.74ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1677471..1683976 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.7
Seed ortholog evalue8.2e-76
Seed eggNOG ortholog2880.D8LE99
Length2237
Hectar predicted targeting categorychloroplast
Gene idEc-00_001440.1
EggNOG free text desc.ATP-dependent Clp protease adaptor protein ClpS
EggNOG OGs2CYZ7@1,2S7DJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001440Ec-00_001440Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1677471..1683976 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001440.1Ec-00_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1677602..1682329 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001440.1.1Ec-00_001440.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1677471..1677718 +
Ec-00_001440.1.2Ec-00_001440.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1678624..1678740 +
Ec-00_001440.1.3Ec-00_001440.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1679833..1679943 +
Ec-00_001440.1.4Ec-00_001440.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1682216..1683976 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0014405UTR:Ec-00_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1677471..1677601 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001440.1CDS:Ec-00_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1677602..1677718 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0014403UTR:Ec-00_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 1682330..1683976 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=153bp
MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMP
EIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQ
VVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHP
AE*
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spliced messenger RNA

>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2237bp|location=Sequence derived from alignment at chr_00:1677471..1683976+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ACAGAGTACATCGAACCAGCACCAAACAACTCTCCCCTCCCCGGCCCTCG
CCCCTGACGCAAGCTCAACGCAAAACACAACCCCTCTCGATCGCGCACGC
CCTACGGACGACCCCCAAGCACACAGCAATAATGTTCCGCCCACTGCAAG
TGTTGATTCTCGCCCTGGTGGCCTCCGCATCAACCGCCTTCGTTGTTCCC
GCATGGACCGCCATGAGACCCGCTGCCGCGTCGGGGCGACCCATCTCGGC
CCTCAACATGGCGGCAGGCGTGGCCATGCCGGAGATCAAGACCGCCGGGC
CTTCCATCGGAGTTCTGGACAAGAAGGAGGTTTCGTTCGAGACGTCCATC
AGACCCGAGGACAAGTACAAGGTCTTGCTGTTCAACGACAACGGCAACAC
CCGCGAGTACGTGTCGAGGTCCCTCGTGCAGGTGGTCGGTTTGAGTGAGG
CCACCGCCTTCCACATCATGCAACAGGCGAATGACAATGGCATGGCCCAG
GTTGGAATTTGGCATCAGGAAATGGCGGACGCGTACAGCACTTCCCTCAA
GGAGAGGGGGCTCATCGCCGAAACTCATCCTGCGGAATAAGCAAACAGAA
GACCGCCTTTGAGCGGCGCTGTTCTGTCGTGGCACGTTCTCAGCGCCGTT
TCCCGAAGGATATGGTCGTCGCGGTGAACGTGGGCGATACTAGCCTATCT
CCTCGATTTCAACCCTCACGCGCGTCGTCATAGACATATTCATGGGCCAC
TATTAGACGTTGGCGTTGAAACAGCGGTCCGGCGATCTGTTTCGGGGGTG
CTGGAGAAGATCGTGGTGGCCGGAATGTCGAAAAGATGTAGGGAAGCCGG
TTCGGCTCGAGACTCCTGTTAGGTGAAGTCTGCGCCAGAATGTAAACGCG
GGTGGAATTTTGGTCGTTCGTTCATCTCCCTGTCGATGTATTACAGCAGT
ATACTCTAGTGCTACTTGTATTGTTTTAGTCGTTTTAATTTGTTCTCCGT
TTACTCTCTACTCATACCTTGTTAGGTGGTGGTAGATTTCATCGCTTCGC
AATCCCCGGCTTGCGGTCATATTTTTTCCCCATGCAAATGAAGAAGAGAA
GAGAAGAGAATGTTCGGGGCACCCTTGTAAAGGAAAATGTTGTCGTTTTG
AGGCGTGTAGAAGCAGGAAGAAAGTTTCCTGACCTAAGCCGCCTTCCGAC
TGGAGGCGGGTGTTCTCGACACAGTCGTCACCTGGGAAGTAGTGGAGCGG
GCGTTGCTGTGTTTGGTTCAGGGGTTGTCGTTTTACGGGGTGCATGTTTG
CTATGTGGTTACGGGAAGAGGCGTAGAGAGGTCTGTGTTTGAAGAGGGTT
GCAGCAAAGACTGTTGTTGGCGCTTTTAAAGTTAAGGTTGTGAAGCCGGT
GGCCCGACTAGACGTGAAATGTGTATATTAGATCAAGCAGCAGCGCTCGT
AATGGTTCGCCGCGGCTGTAAGAAAGGGTCGGTTTTTGTTCACCTGCTGT
CGGTTCCTTTCGTTGACTGTCGCCTACATCTTTTGTGCATTCGTCGGCCT
CGGTCTAAGCAAGGTACCCTAACGGTAGAGATTTGTTTTTTCTCGTAGAT
TCAGCAGCGAAGACGCCGGAGTGCGTAGGAGTCGGCGTCTGACTACCCAT
GGGCGCTTTTTTCGTGTTTTTTTTGTTTTGCGTACAAGTACACGACTTTG
ATTGTTTCATACGACGCGTACACACACGCTGCTGGAATACAGTGGAAATT
TTCATGCAAAATACAACACTCCGTGAGCGTGATGCCACGTCTAACCTCGA
TGAAAACCGCGCGATCTTGCCTGCGGCGGTTTTCCCGTGGAAACCGTGCG
GCAGGCGTGTACGCATGTGGCTGCGTTGTTCACTCAATGTTGTGAGCAGC
CCCACCCCTTGAACCACACTGGGAAGACGTTCTACTGAGAAGAGGGCCGG
GGAAGTCCTGGCAGTCTTTGAACGTGGCACCCCCGCCCAACCCACTCGCC
AAAACGCCTCGTATATACACCTGCGGAGTGCTGTTCACTCGGCATTTTGA
GCAGCCCACCCCTTGAACCATGGTACTGCCGACGACGTTCTACTGAGAAG
AGAGTCGGGGAAGTCCTGCCAGTCTTTGAACGTGGCATCCCCGTCCAACC
CACTCGCCAAAATGCCTCCAATGTACATATGCAGAATGCTGTTCACTCGG
CGTTTTGAGCAGCCCACCCCTTGAACCATGGTACTGC
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protein sequence of Ec-00_001440.1

>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=153bp
MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMP
EIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQ
VVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHP
AE*
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mRNA from alignment at chr_00:1677471..1683976+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6506bp|location=Sequence derived from alignment at chr_00:1677471..1683976+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ACAGAGTACATCGAACCAGCACCAAACAACTCTCCCCTCCCCGGCCCTCG
CCCCTGACGCAAGCTCAACGCAAAACACAACCCCTCTCGATCGCGCACGC
CCTACGGACGACCCCCAAGCACACAGCAATAATGTTCCGCCCACTGCAAG
TGTTGATTCTCGCCCTGGTGGCCTCCGCATCAACCGCCTTCGTTGTTCCC
GCATGGACCGCCATGAGACCCGCTGCCGCGTCGGGGCGACCCATCTCGGT
AAGAGAAGCACAGGAGGAGGACGTACTCCTGCCTAGTCGGGGGGGGGGGA
GTGGGCTCTAGTTGCGCACAAGCGATGCGAATTTCATGTTACGTGGCTGA
TCTAGATTTCAGGCTGTTGTGCTGTTTTTGCCATGAAAATGTAGTCAAGA
CTGCTGTTCTTGATGGCGCTGACGTGTTTTTTCCTCGTGTGTGTGAGATA
GAGCCTCCCCCACCGCCCATAGCTCTTTATCTTGAAAACGTGACCCGTAG
GCTTGGCTTCTGCAATTTTTCAGCCCCGAGCACTTCTCTTTCCTGCCGTA
ACCGCTTTGTGTCAACTGCTTCGGGCGTGAGCTGCGCGTACATCGGATAA
TTTAGCGAGCCTGTGCTTTAGACAAGGGCATCAAACTTCAATATGGAATT
CACCCGCTCTCACCCTCTCCACTCTCCACACCTATTGTATGTATGTTGTC
CAACAACAATGTACGGAGTGTGGTATGCATAGAACGCCAGTATGCTTCCA
CTCAAATTGAGTGCAGCGTTAGGCAAGAGCTGGGCACAACTCTCGTCTAC
CCTGACGGAGGCGGGAATGTAGACGTTGGCCGAGGGACCACGCTCTCGCC
ACGTCATGTTACACGTGAGGGTTGTTGTTTTCGCCGAACTGCTTGACTTT
ACTCTGTAGGTTGACCCATTGTCAAAATCTCCTCGCAATGGTCACCACCC
AAGCATCAGGCAGCATCACAGCAGTAAAAAAGGAGCATGGGAAGTCTCTT
CGCACACACGTGCAAAACTACTGTATCACACGCACGCGCACACCGACAGC
GGACAGCCTGTCCTCCGTCCATTAACCGTATTAGTTCGGTACAGCAGTTC
CTCACACATGGCTCGTTTTGTTGTTGTTTTCTTGCCGACGGCGCGCGTGC
CAGGCCCTCAACATGGCGGCAGGCGTGGCCATGCCGGAGATCAAGACCGC
CGGGCCTTCCATCGGAGTTCTGGACAAGAAGGAGGTTTCGTTCGAGACGT
CCATCAGACCCGAGGACAAGGTAAAGAGCTTTTGTAGTGGCCTCTCCCTC
CCTCCCTCCCTCGCTCCCTCGCTCCTCCACGGCTCAATTTACTTGCCGCC
ACAGCAGTAAATAGTACAGCACCACAGCGGGTGGAACCTCGAGCCGTCTC
TCCCGCTCTTTCTCTCGTGGACTTGTATCTCGTACAAGTATTAGTGTGTG
TTTTCTGAATCTCTTTCCTCCCCCAGTCTTGATTTTTCGCAGTGTGTGTG
CAGCGTGTGCATACAGCAGTTTAGTAGTAGAACCCTTTGCGGGGGGTGGG
TAGATGGCCTGTGGCCGCGGAAGGCGTTCGCGCCAGTGGACCAGGACGGA
TGCTTATTTTTGGTACCGGCCAGGGAATGGAATGTTCACAACAGCAACAA
GTCACGATTTTTGCGTAACCGCGAAAGTCTTTTCGAGCGGTGCTCCAAAT
GTCGCTTTTTGAGCTCAACGAGGTTGATGATGGTCTTTGTTTCGAAGAAA
ACTTGGACCTGCCACTTTCACATATCTTTGGCGACGCCTCAACTCGATTT
CAAATGATTCTCTGCGACTGAGAAGAATACCCACATGTCCGCCCCAGCCA
AGACTAATATAGTTCTCTTTCGAGTCCATGACGTATGATGACGTACGGAT
ATTCGACGCTCTGTCTTGGTCCTACTATCGATTCCAGCCTATTTTTTCAA
GCCCGGCTGCGGCAAAACGCCCGTGCGGCAGTATTATGTAGTCTCGCTGA
TGAGGGAAGTCGTGCCAACTTTCTTACACAAGTGAAACGTAAATAATCTC
GACACTGCTCTGTCCCTGCACAAGACCGGCGATACGAGTGCGTGTACTGC
ACTTGGATCTAATGTACAGACGTGCTGAGGTTCCCGTGATGCTTCGACGC
TCAGCGATGCGCTATTCTGTATTTCTAGCATGGTAAATAGGCCCTCACCA
CAGGCGTCTACGTGTGCAATATGGTAGTTATTTTGGAGGAGCACACCGCA
GTTTTCCCCTGCCCCCTGCCCCCTGCCCTGACCCACACGCTCTTTGTTCT
GTTGGTCACGATGTCCGCCTCTGCTGCGTGCGGTGTGTGTCCCCTTGGTA
CTACATTGGCAGTACAAGGTCTTGCTGTTCAACGACAACGGCAACACCCG
CGAGTACGTGTCGAGGTCCCTCGTGCAGGTGGTCGGTTTGAGTGAGGCCA
CCGCCTTCCACATCATGCAACAGGTGGGTGGGGGTGCTACACAAGACCTG
CTGCTCTTGTTGGTGGCACATGGAACGGGCAGCAGTGCTGCCACTGCTCC
GCTGTATGCTACCGGTGTCGTTAGGTCAATTACCTAGCGTGCCGTAGTCT
GTGCTCTATTGTTAGAACTGCCCAAGGCTTGGGAATCTGAAGCCCGCCTT
GCTTTCTCTTTTTCGTCAGAAACCAAGAGGAAAGCGACACACCCTTCGTA
ACCAGCACGTGGTTGCAAGTGGACCACCTACACGGCCGTGAACGATTGCC
TCTTTTTTTTTCTTTCCATTGGTGGAGGCGATGAAAAAGAAACATCTAGA
AGTGATCGTGAATCGTGTACTTGATACGTACCAGCTTGCAGCCACGGGCA
CACGAAGAAGCCAGTTTGCGTGAAATGAAACATCACCCTCGTCATGTACA
AGCGGCGTAGCGCGACGCAAACAGTCTTGAATTTTTTCGCAGGAAACGTT
CCCAAGACTAGTTTTTTCTTGGAACGATAGCAAGCAAACTTTGGATTTGG
TCGTGCCGGCCTACTGATACTCCGTGTTTTCCCTTATCGTCAGAGTGTGT
ACGGTTTCTTTTGGATTTCAAGCCTCTGGGCCATTTTGAAGGCGCGGCAG
ACCGTGAGGCCGTTATCTCCGCAGCGAATGACTATGGCTGCCGTTGGTGA
CGAGGATTGTGCGCTGGGCGTTGTCCGTCGTGCCGGCTCCGCGGCAACGG
CAGGTGTAACAGTACGGCCAGTGTCGTCGTCAGCAAGCTGTTCTGACTCT
CGCAGCACTCGGTCGGGTCGACGTGCGTGTGCACCCTGGATGGTACGGTA
TACCTGGTGGAATTTCGGTGCAGCAGGCCCCGCACTCCATCCGCTTTGTC
TTGTTGCTGGACACGATGGCCTCTCCGCCATGATGTTGGTGGTGCAGCGA
AGGTGGCCACGCCTGCGATGCAAGATTTCGCGTTCTCGCATCGCAGGCGT
GGCTGCCATCCATCACTGGACCAACTTCATGACGAAGATATCATCACCGC
AGCATCATCAGAACTACAAACCGGATGAAGCGGAGGCCTTTGCGATGTAG
ACGGGAGAGTTTTACGCCGGAATTTCACGGCGCAACCTGTAGTGCAGCAG
GCCCCGCGCTCCACCCGCTGGCCATGATGGCCTCTCCACCATGAGGTTGA
TGCAGCGAAGTCGGCCACGCCTGCGGTGCGAGATATGATCAAATTGCGAT
ATCTCCCATCGCAGGCGTGACTGCCATCACTGGACCAACTTGGTGATAGA
GATATCATCACTGCAGCATCATCAGATCTACAAACCCGATGAAGCTGAAG
CCTTTCCGATGTAGACCTAGGCTTTTCACGCCGGAAATTTCACCATGTAA
GCCGTAGTGCGGCAGACCCCGCGCTCCACCCGCTGGCCACGATGGCCTCT
CCGCCATGAGGTTGATTCAGTGAAGGCAGCCACGCCTGCGATGCGAGATA
TCGCAATTTGCCATATCTCGCATCTGAGGCGTGGCCGCCTCCATTGCACC
AACTTCATGGCGGAAATTCACCGGGAAAGCCGTACCATCCACGGCGCACA
AACACGTGGACCCAACCGAGTGCTGGGCCAGGAGAGCTGGCCTCCGACAC
TAGATGCTTTTGCCGCGAAGGCGGCTCGAAGGACGACCCCTGCCCACGTT
CCCCGCCGCAACGACAACGACTCGCTGCGGCCCCTGCTCCCTCACGTCCC
CCCGGGCCTTGCTCACAATGACCCGGAGGCTTGTACTCAAACACAGCACG
GGATGAGAAAAATATACTCCTATAGTGCAATGTTGTATGCCTGGTTGGTA
GACAATCATCCAGAACAATACCGTACAGCAGTTGGGGGGCTGTACGCGTC
GATATGTTTTCCCTCGTTCATCTCGCCGAGCGTCAGATCTTGAAGCTCGC
GAGTTAAGCAATGGGCCACGGGAAGAATGTACCAAATATGTCTTGGAACG
GAACAGGTGACAATCGACAAGATCAGCAGTGTGTGCAGCCACTCACTTCG
CGCATCAAAATAATTCTTGAACTCCTGATGAGAAAGGGTGGTTGACACCA
GCCTCACCGTTCCTTTCCTGCCTTCTTCAACTTGGCAGTCTGTTCATCGA
CGCTTCATTCTAGAGGCGTGTTGTGTTGCATTCTTTTTTTCTGAGTGCTC
CCATGTTTTTTTCGCTGTGATGCGAGCGATGTTGCCATGCTGAGGACATC
TCTCCTCCCCCCCCGCCGTGTGGTTTTATTTTGCGACGTCAACAGGCGAA
TGACAATGGCATGGCCCAGGTTGGAATTTGGCATCAGGAAATGGCGGACG
CGTACAGCACTTCCCTCAAGGAGAGGGGGCTCATCGCCGAAACTCATCCT
GCGGAATAAGCAAACAGAAGACCGCCTTTGAGCGGCGCTGTTCTGTCGTG
GCACGTTCTCAGCGCCGTTTCCCGAAGGATATGGTCGTCGCGGTGAACGT
GGGCGATACTAGCCTATCTCCTCGATTTCAACCCTCACGCGCGTCGTCAT
AGACATATTCATGGGCCACTATTAGACGTTGGCGTTGAAACAGCGGTCCG
GCGATCTGTTTCGGGGGTGCTGGAGAAGATCGTGGTGGCCGGAATGTCGA
AAAGATGTAGGGAAGCCGGTTCGGCTCGAGACTCCTGTTAGGTGAAGTCT
GCGCCAGAATGTAAACGCGGGTGGAATTTTGGTCGTTCGTTCATCTCCCT
GTCGATGTATTACAGCAGTATACTCTAGTGCTACTTGTATTGTTTTAGTC
GTTTTAATTTGTTCTCCGTTTACTCTCTACTCATACCTTGTTAGGTGGTG
GTAGATTTCATCGCTTCGCAATCCCCGGCTTGCGGTCATATTTTTTCCCC
ATGCAAATGAAGAAGAGAAGAGAAGAGAATGTTCGGGGCACCCTTGTAAA
GGAAAATGTTGTCGTTTTGAGGCGTGTAGAAGCAGGAAGAAAGTTTCCTG
ACCTAAGCCGCCTTCCGACTGGAGGCGGGTGTTCTCGACACAGTCGTCAC
CTGGGAAGTAGTGGAGCGGGCGTTGCTGTGTTTGGTTCAGGGGTTGTCGT
TTTACGGGGTGCATGTTTGCTATGTGGTTACGGGAAGAGGCGTAGAGAGG
TCTGTGTTTGAAGAGGGTTGCAGCAAAGACTGTTGTTGGCGCTTTTAAAG
TTAAGGTTGTGAAGCCGGTGGCCCGACTAGACGTGAAATGTGTATATTAG
ATCAAGCAGCAGCGCTCGTAATGGTTCGCCGCGGCTGTAAGAAAGGGTCG
GTTTTTGTTCACCTGCTGTCGGTTCCTTTCGTTGACTGTCGCCTACATCT
TTTGTGCATTCGTCGGCCTCGGTCTAAGCAAGGTACCCTAACGGTAGAGA
TTTGTTTTTTCTCGTAGATTCAGCAGCGAAGACGCCGGAGTGCGTAGGAG
TCGGCGTCTGACTACCCATGGGCGCTTTTTTCGTGTTTTTTTTGTTTTGC
GTACAAGTACACGACTTTGATTGTTTCATACGACGCGTACACACACGCTG
CTGGAATACAGTGGAAATTTTCATGCAAAATACAACACTCCGTGAGCGTG
ATGCCACGTCTAACCTCGATGAAAACCGCGCGATCTTGCCTGCGGCGGTT
TTCCCGTGGAAACCGTGCGGCAGGCGTGTACGCATGTGGCTGCGTTGTTC
ACTCAATGTTGTGAGCAGCCCCACCCCTTGAACCACACTGGGAAGACGTT
CTACTGAGAAGAGGGCCGGGGAAGTCCTGGCAGTCTTTGAACGTGGCACC
CCCGCCCAACCCACTCGCCAAAACGCCTCGTATATACACCTGCGGAGTGC
TGTTCACTCGGCATTTTGAGCAGCCCACCCCTTGAACCATGGTACTGCCG
ACGACGTTCTACTGAGAAGAGAGTCGGGGAAGTCCTGCCAGTCTTTGAAC
GTGGCATCCCCGTCCAACCCACTCGCCAAAATGCCTCCAATGTACATATG
CAGAATGCTGTTCACTCGGCGTTTTGAGCAGCCCACCCCTTGAACCATGG
TACTGC
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Coding sequence (CDS) from alignment at chr_00:1677471..1683976+

>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=459bp|location=Sequence derived from alignment at chr_00:1677471..1683976+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTCCGCCCACTGCAAGTGTTGATTCTCGCCCTGGTGGCCTCCGCATC
AACCGCCTTCGTTGTTCCCGCATGGACCGCCATGAGACCCGCTGCCGCGT
CGGGGCGACCCATCTCGGCCCTCAACATGGCGGCAGGCGTGGCCATGCCG
GAGATCAAGACCGCCGGGCCTTCCATCGGAGTTCTGGACAAGAAGGAGGT
TTCGTTCGAGACGTCCATCAGACCCGAGGACAAGTACAAGGTCTTGCTGT
TCAACGACAACGGCAACACCCGCGAGTACGTGTCGAGGTCCCTCGTGCAG
GTGGTCGGTTTGAGTGAGGCCACCGCCTTCCACATCATGCAACAGGCGAA
TGACAATGGCATGGCCCAGGTTGGAATTTGGCATCAGGAAATGGCGGACG
CGTACAGCACTTCCCTCAAGGAGAGGGGGCTCATCGCCGAAACTCATCCT
GCGGAATAA
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Synonyms
The feature 'Ec-00_001440.1' has the following synonyms
Synonym
Esi0013_0102
Esi_0013_0102
ATP-dependent Cl