Ec-00_001440.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001440.1
Unique NameEc-00_001440.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length153
Homology
BLAST of Ec-00_001440.1 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 6.770e-99
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query:    1 MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE
Sbjct:    1 MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.140e-27
Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 0
Query:   70 ETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            E    P DK+KV+LFNDNGNTREYV+RSLVQV+G++E+ A+ IM  A+ NGMA VGIW+ E A+AYS  LK RGL++E  P E
Sbjct:   51 EDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTMAHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.330e-18
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   32 AASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPED--KYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 146
            AA    +S  ++A+ V+M  +    P    ++KK    + S +P +   Y++LLFNDN NTREYV+R L  +VGLSE  AF IM +A+ NGMA VG W  E+A+AY+ SL   GL +
Sbjct:   43 AARASSVSHASLASFVSMSTVIENKP----IEKK--GLDNSYQPANGGDYQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLEAHKNGMAVVGSWRYELAEAYNESLNRHGLAS 153          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 4.520e-18
Identity = 68/149 (45.64%), Postives = 88/149 (59.06%), Query Frame = 0
Query:    4 PLQVLILALVASASTAFVVPAWTAM---RPAAASGRPISALNMAAGVAMPEIKTAGPSIGV--LDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 146
            PL V++  L+ SAS A VVPA   M    PA+AS R + +L  A  VAM       P + V  L   + S +       KYKVLLFNDN N REYV+R LV  + G+S+A A+ +MQ+A+  GMA VG+W  E+A+AY   LK  GLIA
Sbjct:    6 PLFVVLCGLLGSAS-ALVVPARALMPEVTPASAS-RTVLSLRTAR-VAMQVDAPVRPKVDVPQLAPTKPSSDKDNEKAKKYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQKAHKQGMAVVGVWVFEVAEAYCDKLKSGGLIA 151          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A6U6GRI4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRI4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.630e-16
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   43 MAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPE--------DKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            M A +    +KT G    VLD+ +V    S  PE        + ++V ++ND  NTRE+V+R LVQ+VGL+E TA+  M  A+ NG+A VG +  E A+ Y  +LK+ G+I +  P +
Sbjct:   65 MPATIERAPVKTGGGGPAVLDRPKVEERQSKSPEKERENVGNEAWEVRIYNDGMNTREFVARCLVQIVGLTEMTAYQTMMDAHQNGIAVVGRYVYERAEMYHEALKKNGIICDLVPVD 182          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2R9I8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9I8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.400e-15
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   78 KYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHP 150
            +Y+VLLFND  NT+EYV+R L+ V GLSE  AF  M QA+ NGM  +GIW +E+A+ ++ +L E GL+    P
Sbjct:   92 RYRVLLFNDPMNTKEYVARQLMTVAGLSENNAFDCMMQAHRNGMGLIGIWMREVAEHHTQTLTEAGLLVSMMP 164          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 2.270e-15
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 0
Query:   78 KYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIA 146
            K+K+LLFNDN N REYV+R LV  V   S+A A+ +MQ+A+ NGMA VG+W  E+A+AY   LK+ GLIA
Sbjct:   83 KWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQKAHQNGMAVVGVWVFEVAEAYCDKLKQGGLIA 152          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.740e-15
Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   54 TAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            + G  +G+++KK +  +      D ++V ++ND  NTRE+VSR LVQ+VGLSE  A+  M QA+ NG+A VG +  E A+ Y  +L E G++ +  P +
Sbjct:   85 STGGGVGLVEKKAMK-DRERTGSDAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQAHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD 182          
BLAST of Ec-00_001440.1 vs. uniprot
Match: M1VIM3_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VIM3_CYAM1)

HSP 1 Score: 77.8 bits (190), Expect = 5.860e-15
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   50 PEIKTAGPSIGVLDKKEVSFETS----IRPEDKYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            P     G     L+++ V  +T+    + P  KYK+LLFND  NTRE V   L++ + GLS+  A  IMQ+A+  GMA VG+W  E+A+AY   L+  GL+++  PAE
Sbjct:   80 PSFSPTGGGATTLEREAVREKTTATKGVDPGKKYKLLLFNDEKNTRERVVEVLLKCIPGLSKLDAQSIMQKAHTTGMALVGVWVFELAEAYCDLLRSEGLVSDIEPAE 187          
BLAST of Ec-00_001440.1 vs. uniprot
Match: A0A7J7IJQ4_9RHOD (ClpS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJQ4_9RHOD)

HSP 1 Score: 76.3 bits (186), Expect = 2.140e-14
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   50 PEIKTAGPSIGVLDKKEVSFETS----IRPEDKYKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152
            P   + G    VL++  V  +T+    + P  KYK+LLFND  NTRE V   L++ + GLS+  A  IMQ+A+  G A VGIW  E+A+AY   L+  GL+++  PAE
Sbjct:   77 PSSPSPGGGAAVLERAVVREKTTATKGVDPGKKYKLLLFNDQVNTRERVVNVLLKCIPGLSKTDAHSIMQKAHTAGKALVGIWVFELAEAYCDLLRSEGLVSDIEPAE 184          
The following BLAST results are available for this feature:
BLAST of Ec-00_001440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE99_ECTSI6.770e-99100.00ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A835ZJP8_9STRA1.140e-2761.45ATP-dependent Clp protease adaptor protein ClpS-do... [more]
A0A7S2V4Q9_9STRA2.330e-1843.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0M0LSS8_9EUKA4.520e-1845.64ATP-dependent clp protease adaptor protein n=1 Tax... [more]
A0A6U6GRI4_9STRA2.630e-1638.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2R9I8_9STRA1.400e-1550.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4HUU8_9EUKA2.270e-1557.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S2VY96_9STRA5.740e-1539.39Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
M1VIM3_CYAM15.860e-1540.74ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
A0A7J7IJQ4_9RHOD2.140e-1441.67ClpS domain-containing protein n=1 Tax=Cyanidiococ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 75..141
e-value: 1.2E-13
score: 50.6
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 59..150
e-value: 1.4E-13
score: 52.3
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 73..147
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 62..152
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 62..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..19
score: 0.698
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1677602..1682329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001440.1Ec-00_001440.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1677471..1683976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001440.1 ID=Ec-00_001440.1|Name=Ec-00_001440.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=153bp
MFRPLQVLILALVASASTAFVVPAWTAMRPAAASGRPISALNMAAGVAMP
EIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQ
VVGLSEATAFHIMQQANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHP
AE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like