Homology
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
D7G978_ECTSI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G978_ECTSI)
HSP 1 Score: 261 bits (668), Expect = 1.580e-86
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 3
Query: 48 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET 428
+PAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET
Sbjct: 6 VPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQET 132
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA)
HSP 1 Score: 209 bits (531), Expect = 2.830e-65
Identity = 101/174 (58.05%), Postives = 128/174 (73.56%), Query Frame = 3
Query: 48 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPG-REDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
MPAYHSK + CGCAILPL T +RGPAP+ G +EDI++E L+YFRAN++FRN+ +E +ADRTLIYLTF+ QQCL+E+EK K+ A+RAL LA + FAAPG+AGW LGT+FP E E FK Y +QCREEL RL +RV+ + ++SK W FSKR+FMGKEM
Sbjct: 1 MPAYHSKLQGTSVGDACGCAILPLRTNLRGPAPILPKGDQEDIIDETLFYFRANIMFRNFAVESNADRTLIYLTFYAQQCLREMEKTDDKQAANRALNLLANKTFAAPGEAGWQLGTIFPAPRVRDEAEMFKAYFKQCREELGTRLIERVFADG-TKSKWWQFFSKRRFMGKEM 173
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA)
HSP 1 Score: 193 bits (491), Expect = 1.280e-58
Identity = 93/173 (53.76%), Postives = 126/173 (72.83%), Query Frame = 3
Query: 48 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
MPAYHSK + +A CGCA+LPL T+ RGPAP++ G EDI++EALYYFRANVLFRNY+I+ +ADRTLIY+T ++ L+E ++ +ASR L A++NFA PG+AGW LGTLFP E+E FK Y +Q REE+++RL ++Y + ++K W +FSKRKFMG +M
Sbjct: 42 MPAYHSKFAELDADEACGCALLPLRTSKRGPAPVSPDGEEDILDEALYYFRANVLFRNYEIKSAADRTLIYMTLYVTMILRECDRIGSATDASRQLQLSAIRNFAVPGEAGWALGTLFPPPADRNESETFKAYFKQAREEMSERLIAKLYTD-AGKNKWWAMFSKRKFMGIDM 213
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA)
HSP 1 Score: 191 bits (484), Expect = 5.530e-58
Identity = 89/174 (51.15%), Postives = 119/174 (68.39%), Query Frame = 3
Query: 45 TMPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
TMP YHSK T + Q CGCA+LPL T VRGPAP +D+++E + +FRANVLFRN++I+ SADRTLIYLT ++QQCLKE E+ E +AL LA++ FA PG W +G+++P S E E K Y +QCREEL +R +++ + S++K W FSKRKFMGKE+
Sbjct: 10 TMPVYHSKFTGQEGQEMCGCALLPLKTRVRGPAPPMPEDEDDVIDETIKFFRANVLFRNFEIKNSADRTLIYLTLYLQQCLKECERAKTVGEGEKALQQLALRQFAIPGDTNWAMGSMYPAPKSTAEGEGCKAYFKQCREELGRRFSQVLFLPDGSKNKWWQAFSKRKFMGKEL 183
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A7S0Q1V8_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V8_9EUKA)
HSP 1 Score: 179 bits (454), Expect = 1.440e-53
Identity = 83/171 (48.54%), Postives = 122/171 (71.35%), Query Frame = 3
Query: 57 YHSKQTD-ENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
YHS D +A+V CGC+ILP+ TT RGPAP+A G +DI++E + +F+ANVLF++++++G ADR LIYLT +I QCLK+LE P K EA + LT +A + FA PG + LG+ FP S+QE + + YM+Q REE+ +RL +VY ++ SK W++F+KR+FM K++
Sbjct: 7 YHSSLNDIADAEVVCGCSILPIKTTTRGPAPVASEGEDDIIDETIGFFKANVLFKHFEVKGPADRVLIYLTLYITQCLKKLEGAPSKMEALKTLTAMAHETFALPGDPAFPLGSFFPKPASSQEADLARAYMKQLREEMGRRLLTKVYGDSSEPSKFWLVFAKRRFMNKQL 177
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A0M0JZA5_9EUKA (Actin-related protein 2 3 complex subunit 3 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZA5_9EUKA)
HSP 1 Score: 189 bits (481), Expect = 1.610e-53
Identity = 90/169 (53.25%), Postives = 122/169 (72.19%), Query Frame = 3
Query: 57 YHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKE 563
YHS + DE AQ CGC+ILP+ TT RGPAPLA G EDI++EAL +F+ANVLF++++++G DR +IYLT +I QCL+ LEK P +E +ALT +A ++F PG AG+ LG+ +P SAQE E + Y RQ REE +RL +VY E+ S SK W++F+K+KFM KE
Sbjct: 3 YHSAKNDEEAQQACGCSILPIVTTTRGPAPLAPEGTEDIIDEALGFFKANVLFKHFEVKGGGDRVMIYLTLYITQCLQRLEKCPSPQEGIKALTAMAGESFKIPGDAGFALGSFYPTPASAQEAELCRSYFRQVREETGRRLITKVYGEDGSPSKFWLVFAKKKFMNKE 171
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A8J6CIQ6_DIALT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CIQ6_DIALT)
HSP 1 Score: 179 bits (453), Expect = 1.920e-53
Identity = 84/174 (48.28%), Postives = 122/174 (70.11%), Query Frame = 3
Query: 54 AYHSKQTDENAQ-VCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESR--SKHWMLFSKRKFMGKEM 566
A+HS+ DE+A + CGCA+LP+ TT RGPAP G+EDI++E L++F+ANVLFRN+++ GSADR L+YLT ++ +CLK +E P K +A RAL N+A+++FA PG A + LG FP + QE + + Y RQ REE +R+ ++ Y++ E+R SK W SKR+FM K +
Sbjct: 2 AFHSQFKDEDAATIACGCAVLPIRTTCRGPAPSLTAGKEDIIDEVLFFFKANVLFRNFEVRGSADRLLVYLTLYVTECLKRVEAAPSKADAVRALNNMALESFAIPGDASFTLGPYFPTPENRQEADFVRSYFRQLREETGRRVVEKCYIDGETRVPSKWWTSLSKRRFMNKAL 175
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A7S4BNT7_CHRCT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNT7_CHRCT)
HSP 1 Score: 177 bits (450), Expect = 4.950e-53
Identity = 82/170 (48.24%), Postives = 121/170 (71.18%), Query Frame = 3
Query: 57 YHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
YHS +A+ CG AILP+ T VRGPAP A +D+++E L++F+ANVLFR+++++G+ADR LIYLT +I QCLK+LE P + A +ALT++A ++F PG AG+ LGT FP ++QE + + Y++Q REE +RL D+VY E+ SK W++F+KR+FM K +
Sbjct: 3 YHSSLNGVDAEAACGLAILPIKTAVRGPAPAAPAESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKALTSMAHESFLIPGDAGFALGTFFPSPQTSQEADLTRAYLKQLREETGRRLLDKVYGEDGQPSKFWLVFAKRRFMNKSV 172
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
A0A7S2FM28_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM28_9STRA)
HSP 1 Score: 177 bits (449), Expect = 1.060e-52
Identity = 77/173 (44.51%), Postives = 120/173 (69.36%), Query Frame = 3
Query: 48 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
MPAYHSK D CGC +LP+ TTVRG AP + EDI++E L +FRAN+ FRN++++G ADRTL+YL+ ++ Q LKEL++ K +A++ L L +++F PG+ GW LG +FP TS + + F+ Y +QC+ E+ +R+ + +Y+ + +++K W +F+KRKFMGK +
Sbjct: 13 MPAYHSKNNDYQGNEACGCLMLPIKTTVRGTAPPCEADDEDIIDETLKFFRANIFFRNFEVKGGADRTLLYLSLYVAQVLKELDRQNDKTQAAKDLHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 185
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Match:
R1DRS6_EMIHU (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS6_EMIHU)
HSP 1 Score: 176 bits (447), Expect = 1.450e-52
Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 3
Query: 48 MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLAMQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVYVENESRSKHWMLFSKRKFMGKEM 566
M YHS +V CGCAILPL T++RGPA A G EDIV+E L YF+ANVLF++++++G+ADRTLIYLT + QCLK LE P + + +ALT LA + F+APG+ + L + FP G S E + + Y++Q REEL +RL +VY +N SK W+ FSKRKFM K +
Sbjct: 1 MVVYHSSLNGTETEVACGCAILPLKTSIRGPAESAAEGEEDIVDETLGYFKANVLFKHFEVKGAADRTLIYLTLYTTQCLKRLETCPTQTDGVKALTALAHEAFSAPGEPRFALASFFPAGASPAELDLCRAYLKQAREELGRRLALKVYGDNGPPSKLWIAFSKRKFMNKAL 173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.864.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.58e-86 / Id = 99.21 Expect = 2.83e-65 / Id = 58.05 Expect = 1.28e-58 / Id = 53.76 Expect = 5.53e-58 / Id = 51.15 Expect = 1.44e-53 / Id = 48.54 Expect = 1.61e-53 / Id = 53.25 Expect = 1.92e-53 / Id = 48.28 Expect = 4.95e-53 / Id = 48.24 Expect = 1.06e-52 / Id = 44.51 Expect = 1.45e-52 / Id = 50.29 Sequence D7G978_ECTSI A0A835YQX6_9STRA A0A7S1U2P7_9STRA A0A7S2RMH4_9STRA A0A7S0Q1V8_9EUKA A0A0M0JZA5_9EUKA A0A8J6CIQ6_DIALT A0A7S4BNT7_CHRCT A0A7S2FM28_9STRA R1DRS6_EMIHU
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 1
Start 1
Seed ortholog score 261.5
Seed ortholog evalue 2.7e-67
Seed eggNOG ortholog 2880.D7G978
Preferred name ARPC3
Model size 701
KEGG rclass RC00002,RC00017
KEGG ko ko:K05756,ko:K07541,ko:K09680
KEGG Reaction R02971,R03018,R04391,R05919
KEGG Pathway ko00563,ko00770,ko01100,ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map00563,map00770,map01100,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG Module M00120
Hectar predicted targeting category other localisation
GOs GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0005885,GO:0006996,GO:0007010,GO:0007015,GO:0008064,GO:0008150,GO:0009987,GO:0010638,GO:0015629,GO:0016043,GO:0030027,GO:0030029,GO:0030036,GO:0030424,GO:0030426,GO:0030427,GO:0030832,GO:0030833,GO:0030838,GO:0031252,GO:0031334,GO:0031941,GO:0032271,GO:0032273,GO:0032535,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0033267,GO:0034314,GO:0042995,GO:0043005,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044463,GO:0044464,GO:0045010,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051493,GO:0051495,GO:0061850,GO:0065007,GO:0065008,GO:0071840,GO:0090066,GO:0090723,GO:0090725,GO:0097435,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0110053,GO:0120025,GO:0120038,GO:0150034,GO:1902903,GO:1902905
Exons 5
EggNOG free text desc. Arp2/3 complex-mediated actin nucleation
EggNOG OGs KOG3155@1,KOG3155@2759
EC 2.7.1.33
Cds size 525
COG Functional cat. O
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko04131,ko04812
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348738.400992-UTR-Ecto-sp6_S_contig102:469579..469626 1682348738.400992-UTR-Ecto-sp6_S_contig102:469579..469626 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 469580..469626 +
1682348738.4465072-UTR-Ecto-sp6_S_contig102:473718..473847 1682348738.4465072-UTR-Ecto-sp6_S_contig102:473718..473847 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 473719..473847 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348738.410212-CDS-Ecto-sp6_S_contig102:469626..469629 1682348738.410212-CDS-Ecto-sp6_S_contig102:469626..469629 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 469627..469629 +
1682348738.4173548-CDS-Ecto-sp6_S_contig102:470747..470856 1682348738.4173548-CDS-Ecto-sp6_S_contig102:470747..470856 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 470748..470856 +
1682348738.4245744-CDS-Ecto-sp6_S_contig102:472008..472170 1682348738.4245744-CDS-Ecto-sp6_S_contig102:472008..472170 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 472009..472170 +
1682348738.4320045-CDS-Ecto-sp6_S_contig102:472524..472632 1682348738.4320045-CDS-Ecto-sp6_S_contig102:472524..472632 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 472525..472632 +
1682348738.4393744-CDS-Ecto-sp6_S_contig102:473575..473718 1682348738.4393744-CDS-Ecto-sp6_S_contig102:473575..473718 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 473576..473718 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.864.1
>prot_Ecto-sp6_S_contig102.864.1 ID=prot_Ecto-sp6_S_contig102.864.1|Name=mRNA_Ecto-sp6_S_contig102.864.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=175bp
MPAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYF RANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRALTNLA MQNFAAPGQAGWHLGTLFPGGTSAQETEQFKGYMRQCREELAKRLCDRVY VENESRSKHWMLFSKRKFMGKEML* back to top mRNA from alignment at Ecto-sp6_S_contig102:469580..473847+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.864.1 ID=mRNA_Ecto-sp6_S_contig102.864.1|Name=mRNA_Ecto-sp6_S_contig102.864.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4268bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:469580..473847+ (Ectocarpus species6 EcLAC_371)CTTCCTCAGCTGTGTGGAGCAGCTCGGTTTGCGTCTGTGTATCAACT ATG
GTGAGCCCCATAAGAATCGTAGTGACGAGTCTTGTCGATGTCTTATGCAG
ACAGAAATGCGGCGGAATTTTCGCTTTCTTGCGCACACTGGTGTTGTTGG
GGCAACCGGCAACCCATCCCTCCGCCCGCCGGTAGCCCCCGTCCTTGCTG
GTCTCTGCCTGCCGAGCGCTCTACCTCGATGCTTGCTTTGCTCGTGTGCT
CTGGGGTGAGAGGGGTGCTTCTTCGTGGAAGCGCCCCTCTCGTTGTCTGC
TGAGTTCCGGATGAGGGGAGACAGCGGGTACCGTATAATAGTAGCCAGCG
CAGCCCCTTGTGTCCCGACTCCCGGCGGGGGTGTCCACGCCGTGTGTTTG
GCGCATCCGCCCGTAGTAGCTGATGCACTGCCAAGAATTCCATACGGTAG
TGCTGGAGGAGCCTATCTCACTCATGCCTTACCTTGCGTTGAAATCAGCA
CTGGTCGGCACGTGTTTTGCCATATATGTTCTTCAGCGCCTGCCTCCATG
CACTCCAGTATACCCCCCCGCCCGCCCCGGATGGTTTGGCGCATCACACG
CAAGGATAATGACCAGCGTGTGGTTCGTCCTTTGGGTGAAATCGGGTAGG
TAGCCACTCCGCCACTCGGAGCATGGGTTCTGGTTCTTCAGGGGGATCGG
TCCATGCGTCAGCAAGTAGTGGCAACAGCAGCTTGTCTTTCGGCTCCCGT
GACCGCACTGTTGGGTATGCATACGCTCTGTCACCCGACCGGTTGGCCTC
TATCTGTAGCTACTCGAGTCTGTTTAAAGGACCTTTAAGTACATGCGTGG
TAGAAACACCCGCACACAGCCGTATTTGTGAAATATCCATGTCCGGTTTT
AAGAAATTCTACGTCAAGCGAAACCTTCTTAAAATTTCTTATGCATAGCT
AGTTTTACGTCCTCTATTCCCCCGTCTCCCCTTGAGCACCATTCTTGGTC
GAATCTGTTCTCCACCACACAAACCAATCATGAACGAAAGTACCACTCCT
ACTGCTGTAAATAATCAACTTCCACACCCATAAACTAATCCCATGTCTCC
CCTTCCTTGCCGCGCTGTCCTTGCTCGAACCTGCTCTCCCACGAAACAAA
CCAACAACTACTCACAAGCCGGCGTATCACTCCAAGCAAACCGACGAGAA
CGCGCAAGTCTGCTGCGGGTGCGCGATTCTGCCGCTGAGTACCACCGTAC
GAGGACCGGCCCCGCTGGCACAACCAG GCAAGCTTTTTTGTTGTTTTTTC
CTGATATGACCCAACGAATCCATCTCCATCTTTAGAAAAGAGTCTACGAT
AGATTTGCAATGAATCCATAGCGTCGGCGAAGGCTACCTACCTGTATTTT
CATGATTTCCCGAGCAACCAGGCAAGCTTTTTGTTTGTTTTTTTTGCGGT
GGGTGTGGCAGCCAAGGATAGTGTTTTGGAAGTACTGACAATTTTGTTGA
GAAGCACGAAGGCCACTGCACAACTACCGTTCAGTACGTTGACTGGCGGT
CCAGCCGTCATACGTGCTTCTCAACGAAAAGCTACTGCCGGCCGGAGTCC
GTCTAGCTGTTAAGCCACGACTACCAGTCAGGGTTGTAGTCCGGTGGTCA
TCCGTGCGTTTCACGCTCAGCCTAACGCGGAGGACGTGGTGGGTGGTGGT
ACAGGCGGCGCGTGCCCCCGTCTCACGCCGTTTGGCCGAAACGGTACATG
AAACAACTACCGTAGGTTGCATACGCAAGATACCACACCCCCTGGACCCA
TTTTCGAAGCTCAAATACTCCACGACGAAGAGGATGTCGAAACCGCATGG
TGCGTTTTCGGAAAGATCTCGACGAAGGGTTTGTAACGCCGCCATTTTCG
GCACCGTCGCTGCTTTTCCTGCCGAGGAACTGAGATGTGAAAATCGGTCC
AGGGGATGTGATATCTTACACAACTGACGGTAAACGCAGCAGCAGTGCCA
TCGACTGTAATTCTAGAAAGCACTTGAGATTTTCGCTCCAGAGCGTAGCG
CGAATCACTCTCCCCTGCAACCGGACGTGACCTCCTCGCTACCGCTGTAT
CCACCCACACGGTTTCTTTTGGGGGGGGAGGTGCAGCCCACCATTCGTGC
AGCTTCGCCGCAGCGCTTCTTTCACGGATGATTCTACCTACGCGGGCCCT
GCCTGTGCAGCCCCCAATCGCGTGCTCCGTCCTGGACAAATCGTATCACG
TCCCGGTCATGATATCCCGTCCCGGTTTTGACTTGCTCTCTCCCGCTTTT
CACGGTTAAAAAGGCGTGTGTGTGTGAAAGCCGCATGATGTGTACTCTTG
TCAAGCACGGCTTCGCACGCATGACGAGCACGAGCGCGAGTCCCGACCCC
CCACCCCACTTCGAAAATTGTTATCCTAGGGCGAGAAGACATAGTGGAGG
AGGCCTTGTACTACTTCCGCGCCAACGTGCTCTTCCGGAACTACCAGATC
GAGGGTTCCGCTGACAGGACTCTGATCTACCTGACGTTCTTCATCCAGCA
GTGCCTCAAGGAGCTAGAGAAGCACCCCGGCAAGAAGGAAG GTGAACTAC
TTATCgGGGGGATCAGTGGTTGTTGTAGTTGTTGCTGCTGCTGCTTCCGC
TGCTGTATTGGCAGGTGGTATGTACATTTATGGTTGCAGGGTTGGTCTTT
TGTCTTAAGTTGTTGGTTTGTGGTTGGTCGTTGCGGCCTCGTTGTCGCCA
CATGTAAAGGGAGGACAAGCCAGCTGCCTGCCAATGGCACGCCCCGGCCG
TACGACGAAGTCGAAACCTGCGGGACTTTCTTCGCTCAGCACCAATCTAC
CGACTGTGCACGGTTTTCTCAATAACCTTCCATTTTGTTCTAATCCTCGT
CGCTGTCATGTACTTTCTGCCACTGCCTTGGCGCCACCGCTTCAGCCTCG
AGGGCACTCACGAACCTGGCGATGCAGAACTTTGCCGCCCCGGGGCAGGC
CGGGTGGCACCTTGGCACCCTCTTCCCGGGGGGGACCTCAGCGCAGGAGA
CCG GTGAGaTTTTCCTTGGTGTTTTTCTTGTCGTAAGAAAGTTAGTAGCC
GTGGCATAGTAGTGTCTTCTTTACTTCTCTTGAAAGATTGAGAAATCGTG
CTATTTGTTGGTGTTTTTTTGTCGTGTCGTGAGAAGCGCTTTGAATCGTG
CCCTTATTTTGCCCTTTTCCGTTTCATGAGAAGGTAAGAGTTCATGCCGA
TTGTTGTTGTCGTGCTTCGTGAGAAAGCTGTGGACGGTGCCCATGATTCT
CTTTTTCCTTCCCTCTTCCCTGAGAATTTATAATTGTGCCCTCAAGGAAG
GGTGCGCCCCCCGACAACACACCGGCGAAGAGCTATCGCAGAAGCGAAAC
CGGCTTTTGTTCGGGTTTCGCCATCACTCTCGTGAAACCGATTCCCCCTT
CGTGGGGGGGGGGCTTGTGTATGCGTCTCGTGTTTTTGTGTTTGGTTGTG
TAGTGTACCGTAGTCGTCGGTGCCGTATCCCCCAGTGTCGTACCCGCCCA
ACACATTTAATGAAACGCTGTACATGCTAACCGCTACAATACGGCATGCA
ATACATGACTACCGTAGGTTTCATAAGGTATTACACCCCCTGGACCGATC
TTCAAAGCTCGATTACTCCGCAGGACCAGCAGTGACGGTGCCGAAAATGG
CGGGAGGCGTTGGAACCGACTCGTCGGGAGCTTTCTGAAAACACATAATT
TGACTTTGTCTCTGGCACATCTTCTGCGTCGTCGTTGAGTAGTTGAGCTT
TGAAAAATCGGTCCAGGGGGAGTGTTATCTTACGTCATGCCACCCACGGT
ACGTCCCCCCCTTCCCTCGCGCGCGCGGCCTCTCTGCGCCCAATCCACAA
CTGACGAACCGCATCACCGCCTGCCATACATCGCATGCTGGCTCTACCTT
GCTGTTCGTGCTGGCTCGGGGCGGGGCGGGGCGGGGGGACGTGCAGAACA
ATTCAAGGGGTACATGCGGCAGTGCCGCGAGGAGCTGGCGAAACGGCTGT
GCGACCGCGTGTACGTAGAAAACGAGTCGAGGAGCAAGCACTGGATGCTC
TTCAGCAAGAGGAAGTTCATGGGCAAGGAGATGCTCTGA ACCTAACATGT
ACTTTTCGATACATATGTAGCGAGCGGGTATAGTTGTTGTCGGTTTGTTC
GTGTTGGTGTTTTTTCATTTCAATCTTTATAATTTCTGTTCTGTTTTTAG
TAGAGCATATCGTGCAAT back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:469580..473847+
>mRNA_Ecto-sp6_S_contig102.864.1 ID=mRNA_Ecto-sp6_S_contig102.864.1|Name=mRNA_Ecto-sp6_S_contig102.864.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=525bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:469580..473847+ (Ectocarpus species6 EcLAC_371) ATGCCGGCGTATCACTCCAAGCAAACCGACGAGAACGCGCAAGTCTGCTG CGGGTGCGCGATTCTGCCGCTGAGTACCACCGTACGAGGACCGGCCCCGC TGGCACAACCAGGGCGAGAAGACATAGTGGAGGAGGCCTTGTACTACTTC CGCGCCAACGTGCTCTTCCGGAACTACCAGATCGAGGGTTCCGCTGACAG GACTCTGATCTACCTGACGTTCTTCATCCAGCAGTGCCTCAAGGAGCTAG AGAAGCACCCCGGCAAGAAGGAAGCCTCGAGGGCACTCACGAACCTGGCG ATGCAGAACTTTGCCGCCCCGGGGCAGGCCGGGTGGCACCTTGGCACCCT CTTCCCGGGGGGGACCTCAGCGCAGGAGACCGAACAATTCAAGGGGTACA TGCGGCAGTGCCGCGAGGAGCTGGCGAAACGGCTGTGCGACCGCGTGTAC GTAGAAAACGAGTCGAGGAGCAAGCACTGGATGCTCTTCAGCAAGAGGAA GTTCATGGGCAAGGAGATGCTCTGA back to top