mRNA_Ecto-sp6_S_contig102.843.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.843.1 vs. uniprot
Match: A0A6H5K1B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B4_9PHAE) HSP 1 Score: 146 bits (368), Expect = 3.420e-38 Identity = 92/129 (71.32%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 1 MLTEALSPSPPPP----GLSASLASSSRAGVAGVPGDVGGRGDDLGVAAMGGGVTAFEAEESGVLRALLHALVDGRHQDGDGGGGDCGDPVIDLVGDAVDIVGDIGGDGVGGRDEGEVTTSGGNDRLGE 375 MLTEALSPSP PP SRAGVA VPG+ GGRGDDLGVAAMGGGVTAFEAEESGVLRALLHALVDGRHQD DGGGGDCGD VIDLV G RDEGEV TSGGND LGE Sbjct: 304 MLTEALSPSPSPPLSXXXXXXXXXXXSRAGVADVPGE-GGRGDDLGVAAMGGGVTAFEAEESGVLRALLHALVDGRHQDEDGGGGDCGDSVIDLVXXXXXXXXXXXXXXXGARDEGEVATSGGNDGLGE 431 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.843.1 >prot_Ecto-sp6_S_contig102.843.1 ID=prot_Ecto-sp6_S_contig102.843.1|Name=mRNA_Ecto-sp6_S_contig102.843.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=125bp MLTEALSPSPPPPGLSASLASSSRAGVAGVPGDVGGRGDDLGVAAMGGGVback to top mRNA from alignment at Ecto-sp6_S_contig102:180716..181090+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig102.843.1 ID=mRNA_Ecto-sp6_S_contig102.843.1|Name=mRNA_Ecto-sp6_S_contig102.843.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=375bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:180716..181090+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:180716..181090+ >mRNA_Ecto-sp6_S_contig102.843.1 ID=mRNA_Ecto-sp6_S_contig102.843.1|Name=mRNA_Ecto-sp6_S_contig102.843.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=375bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:180716..181090+ (Ectocarpus species6 EcLAC_371)back to top |