Homology
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)
HSP 1 Score: 412 bits (1058), Expect = 3.600e-142
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 1
Query: 16 GYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
GYEQRHPGDGTMEEPATD QAQVSRGD D EKGPESAD N+QVD RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKK GGNSGKRY EGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER
Sbjct: 35 GYEQRHPGDGTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
D7FRL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL0_ECTSI)
HSP 1 Score: 245 bits (626), Expect = 9.440e-80
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 49 MEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLI 459
MEEPATD QAQVSRGDRDPEKGPESAD NEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIAR + S L+
Sbjct: 1 MEEPATDPQAQVSRGDRDPEKGPESADDNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARGQSFSSAEKLL 137
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)
HSP 1 Score: 224 bits (570), Expect = 1.030e-69
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1
Query: 175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
LS +KL++Y E AKRGVVY+SR+PPFMKP K+KHL+ Q+G + RVYLV ED+A ++ R AGGN +YTEGW+EFEDKK+A++ A LN IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KMEER
Sbjct: 30 LSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)
HSP 1 Score: 214 bits (546), Expect = 3.300e-66
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 1
Query: 175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
LS KL+ + + KRGVVYLSR+PPFMKP KVKHL+ Q G + R+YLV ED+ N + R AGGN + YTEGW+EFEDKK+AR A LN IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE QAK+EN Y++ VE + F KMEER
Sbjct: 22 LSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)
HSP 1 Score: 213 bits (543), Expect = 1.210e-65
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 1
Query: 175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
LS KL +Y E +AKRGVVY+SR+PP+MKP K+KHL+ ++G + R+YLV ED+ ++ R AGGN +YTEGWVEFE+KK+A+ A LN IGGRKR+YYHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KMEER
Sbjct: 30 LSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)
HSP 1 Score: 213 bits (543), Expect = 1.810e-65
Identity = 104/178 (58.43%), Postives = 133/178 (74.72%), Query Frame = 1
Query: 145 DARQPLNYKPL--SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
DA++P L S K++ + + KRGVVY+SR+PPFMKP KVKHL+ Q+G + R+YLV ED+ + + R AGGN + YTEGW+EFEDKK+A+ A+ LN IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KMEER
Sbjct: 24 DAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A7S1TZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ85_9STRA)
HSP 1 Score: 209 bits (532), Expect = 2.520e-64
Identity = 99/168 (58.93%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 169 KPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
K L L +YN +A+RGV+YLSRIPPFMKP KV+HL+ HG VTRV+L ED++NR+AR+++GG+ KRY EGWVEF +KK+A+ A SLNNT IGG +R+YYH+D+WN+KYL+ FKWDHLTEK+AYERRVR ++R E +QA+RENA ++L + G++ ME R
Sbjct: 35 KTLDAAALAEYNAKMARRGVLYLSRIPPFMKPQKVRHLLAVHGEVTRVFLAAEDRSNRKARRRSGGSKAKRYDEGWVEFAEKKVAKRVALSLNNTKIGGSRRSYYHEDIWNIKYLKGFKWDHLTEKLAYERRVREHRMRAEMLQARRENAMLLDLADQGKALRAMEGR 202
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)
HSP 1 Score: 209 bits (533), Expect = 3.670e-64
Identity = 97/166 (58.43%), Postives = 130/166 (78.31%), Query Frame = 1
Query: 175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
LS K++ + E +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED++ + R AGGN ++YTEGW+EFEDKK+A+ A+ LN TLIGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E V+ + F KM+ R
Sbjct: 21 LSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)
HSP 1 Score: 209 bits (531), Expect = 4.450e-64
Identity = 100/183 (54.64%), Postives = 133/183 (72.68%), Query Frame = 1
Query: 133 NEQVDARQPLNYKPL---SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
N + + +P +KPL S K++ + + KRGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+ + R AGGN YTEGW+EFEDKKIA+ A+ LN T IGGRKR+YYHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E Q+K+EN Y+E V+ + F KME R
Sbjct: 3 NMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match:
D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)
HSP 1 Score: 209 bits (531), Expect = 6.910e-64
Identity = 97/166 (58.43%), Postives = 129/166 (77.71%), Query Frame = 1
Query: 175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
LS K++ + E +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+A + R +GGN ++YTEGW+EFE+KK+A+ A+ LN T IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E QAK+EN Y+E VE + F KME R
Sbjct: 21 LSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.60e-142 / Id = 95.89 Expect = 9.44e-80 / Id = 91.24 Expect = 1.03e-69 / Id = 64.46 Expect = 3.30e-66 / Id = 63.25 Expect = 1.21e-65 / Id = 60.84 Expect = 1.81e-65 / Id = 58.43 Expect = 2.52e-64 / Id = 58.93 Expect = 3.67e-64 / Id = 58.43 Expect = 4.45e-64 / Id = 54.64 Expect = 6.91e-64 / Id = 58.43 Sequence A0A6H5LDQ8_9PHAE D7FRL0_ECTSI A0A2D4BVT2_PYTIN A0A5D6Y296_9STRA A0A8K1FEZ1_PYTOL K3WDP5_GLOUD A0A7S1TZ85_9STRA H3HB09_PHYRM A0A3R7J166_9STRA D0MVG4_PHYIT Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 0 Seed ortholog score 248.1 Seed ortholog evalue 4.7e-63 Seed eggNOG ortholog 2880.D7FRL0 Preferred name ABT1 Model size 787 KEGG ko ko:K14785 Hectar predicted targeting category other localisation GOs GO:0000028,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001671,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007399,GO:0007417,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030234,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032781,GO:0032991,GO:0034462,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0060255,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097659,GO:0098542,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 Exons 4 EggNOG free text desc. small-subunit processome assembly EggNOG OGs KOG3152@1,KOG3152@2759 Ec32 ortholog description Nucleotide-binding alpha-beta plait domain Ec32 ortholog Ec-12_002630.1 Cds size 783 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko03009
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348727.399905-CDS-Ecto-sp6_S_contig100:579671..579980 1682348727.399905-CDS-Ecto-sp6_S_contig100:579671..579980 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 579672..579980 + 1682348727.4096744-CDS-Ecto-sp6_S_contig100:580512..580630 1682348727.4096744-CDS-Ecto-sp6_S_contig100:580512..580630 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 580513..580630 + 1682348727.4171534-CDS-Ecto-sp6_S_contig100:586333..586514 1682348727.4171534-CDS-Ecto-sp6_S_contig100:586333..586514 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 586334..586514 + 1682348727.4252899-CDS-Ecto-sp6_S_contig100:586859..587034 1682348727.4252899-CDS-Ecto-sp6_S_contig100:586859..587034 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 586860..587034 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.761.1
>prot_Ecto-sp6_S_contig100.761.1 ID=prot_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=261bp
PRESGGYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDA back to top mRNA from alignment at Ecto-sp6_S_contig100:579672..587036+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.761.1 ID=mRNA_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7365bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:579672..587036+ (Ectocarpus species6 EcLAC_371)CCGAGAGAGAGCGGGGGGTACGAACAGAGACACCCAGGAGACGGCACGAT
GGAAGAACCAGCTACCGACTCTCAAGCCCAAGTCTCTAGAGGCGATCGTG
ATCCGGAGAAGGGGCCGGAGAGTGCCGATGGCAACGAACAGGTGGACGCT
CGGCAGCCTTTGAACTATAAACCGCTCAGCCACAGGAAGCTGAAAGACTA
CAACGAGGGCCTGGCCAAGCGGGGGGTGGTGTACCTGAGCCGCATTCCGC
CCTTCATGAAGCCCGCCAAGGTTAAGCATCTCATGGAGCAGCATGGCGTC
GTGACACGG GTGAGTCAACCAAGGTTAGGTTTTCATTGGGGCAATTTTGC
CCGTGTATCGTAGGTGACGTAGCATAACACACCCTCTGGTGAGACGTAGC
ATAGGTTTTCGGAAAGCTCTCCACAAGATGTTTCAACGCCGCAATTGTCG
GCACCGCCTCTCTCCTCTGCTGCGGAGTAATCGGGTGGTGAAAATCGGTC
CGGGGGTGTGATATCTCACGTCACCTAGGTAGTAGGCAAACAGTAGTACA
CCAACAATCGAGCAATCCAGCCACACACAAGAGGCTTCCTACTGCTGCTG
CTGTAACGGGTGCCGCAACCAAACAAACAGGACTTGCATGGCCACTGCAG
GCACAGGTCATGGACAAGTCCGGCATGGCGCACCCTGATTTGTGTGCATC
TCGCGAACAATTTGCTTGGCCTTGCTCGCCCACCCGGCTCTTGTTGTACT
CTTAGAACCACTACAAAAGTACGTATAATACATGAAGTGGTACTTGGCGC
GTCCACCACCTGATGCCCTTGTCCTGCCGGGAATGAATCAGGTATACCTT
GTGGAGGAGGATCAGGCCAATCGCCGCGCCAGAAAAAAGGCCGGCGGGAA
CTCTGGGAAGCGTTATACCGAAGGCTGGGTAGAGTTCGAGGACAAGAAAA
TTGCACGAG GTCAGTCTTTTTCCAGCGCTGAGAGATTGCTGTATACTGCA
TAAAGGGCCACAAGCCAGTGCCGGCCCGCTCGTAGGAGCCACCTACACAA
TATTGAGTAAGGCTCGAAGAAAGCCTTGCCAACTATCGAACACAAGCTTT
TGCTGAGCTTACAGAAAGGATTCAGCGTCCTGCCGGCGGCTGAGCCCAAT
CTCTTACGCCATTTTTCTTATTTCTCCGGAAACCCTGAGCCTCGAGTTCT
TGTGAATATGTCTCGTACCTCCTTCGTACGAGCGGACCAGCACTCGGGAC
TGTTGTGCGTGTACACTATTTCACTACTTACATGGTCTATTATAGTATAA
AGTCTACGACAGAACAGCGTACGTAGGTTGTGCTGCACAGCAGTAAGCAG
AGGCCAGCGCCTTTGTCTCCATTGACACGCGGGTGTTGGTTCGAGTCTAG
CTTCTTTTTTATTCGGAGACGCTGGAGACACTGCCGAGAGAGAGAGAGGT
GCAGCAAAAGAGAAACTGCTGTACTTGTGGACATGCAACAGCTATATCCA
CCTATAGATAATGAGGGCTGCCCGCGACAGGGTGGTGGCCACAGACAGGG
TCGTACAACGGTTGATGAGTAGTAGCTATGCGGCTGATAGGGCAGGTTAG
ACTCGTAGGCCTTGAAATGATCAGTCGTCGTGCTGCCGAAACTACTCTAT
TTTCAGTATGATAAAATGATCGATGTAAATGATCTATGAGGGCTTGTAGA
CCAACAAGCCGCTATTTGCACTTCCGGGTCACTAGAGGTCCTGTGTTATT
CCCACAAGCACACAAGCACAACAGCACACACCTACCTTCTCATGAACGGT
TCCCTAGGTTTGGGCGAGGATATGTATGTCTGGAGCTGTGCATACGTGTT
GCTGGCTGTTCCATTGCTCAGCTACATCCTCGCAGATGCTGCTGTTGGAA
TACAGCGAAGAGAGACATAGATCGCTAGCACCCCCGCGCGCGCACGAAGA
ACAAGTCCGTTCGAGCTAGCTCGTGGTATTTTCATCGTCTAGTGTGATCA
GTGAAGCAGCAGGCGGTAAAGCAAAGTTGGTGTGCAGCAGCAAGAAGACA
TGAAAAAAATGTAGAAAGGGCCAAAAGTCCGAAAAAAAAGGCTCGCGGCA
CACTATCGCTGTGTGTGCCGATCTCGCTTGCTTGACCTACGAGGCTAGAC
ATCCTACCACAGGATCAGGGACCACTAGATCCCGGCCTCCTTTGCAGGGG
TACGGTGGCGGCAAGCAATACCAAGCAGTGTCTCCTCTGTTTCCCGCAGC
AGCATTTGTGATGACAGACAACGTTTTCAGTCCGGATGTATCGGATTCTT
TTTAGACCACAGACGCACCGATCGCAGCAGCAGCAGCAGCAGCAGCAACA
ACACAAGTCTCAGCCTCCAAGGGCCAAGCAAACTGACTGCTTTGATGGCA
TACGCTTGTCACGTGTGTCTGTGGGATTCGTTCGCCACCGCTTGTTGCGT
GGTATCACTGAGGCATATAACAGTTCTATCAGTTGTGTTCGGCGTAACTT
TCGAGTATTTCGCATTTCCAGCGGGCCGCTCTCCGTTCAAAGATCGGTTT
TCTCGAGCCCTGACAGACCAGCATCATATTTCACTTGGATTTAGAGTaCT
GTCTTTCCGCTTTCCGGGGCATTCACACACCGGTCTCTTTTCCGATTTTC
ATGACAGACCAGATCACTTGGATTTAGAGTACTGTCTTTCCGCTTTGGGC
TGCCGGTCTGTCCGATTTTCGATCTGGGCCCGGTCTGTCTTGAGACTCAG
GAACTCCTTTGCGGCTCTTCCTATTACACGAGGCATATCGCTCTTCGTTT
CGCTCTCTGTCTGGATCTCTCGTACTCCTTTCTTTGCGATCACATCAGGT
CTATCTCTCGCTGTGTCTGGATCTCGCTCTCGGGATTTTTTCGGCTTTTT
TCCGTTTTCCCGCCGTTGGATTATCCGCCTGCTTTCTCCGATTCGCCGCT
TTCCCGACACCTGCAACTTGCGCAGCTCTCTCCCTCTCTCTCCCTCGCAC
ACGCGCTCCCCGCCTGCTCTCATTGCCCCCCTCCTCTCACTCCGCCCACA
GCGCCTTCCACTTACTACCACCAAGCGCCACATTTCGCGCCCCCTCCTCT
CACTCCCCCGAGAGCACCCTCCACTGCCTACCAGCACCCGTCTAAGTATA
TGTAGAACGCATACATTTTTTGTTTCGGCCACGAGCTCTCCATTCTTCAA
GCGTCACATTTCCAGCGGGCCGTTCTCCGGGCAGCATTCATTCCGGATTT
TCGGCCGCTGACAGACGACCTTTTTTTTCCGTTCCTGATTTCTATGTGAT
GATCACAATCTCTCAGCTGTATAGTATAACACGCTGTGCTTTCTAGAGCA
GTACACAGTAGTAGTAGTTCTCGCTTTGTCTCTCTCTGGGCTTGGTCTCT
CTTGCTCTACTTATTTTTTTCTCTCTCTGTCGATGGCTCTCTATTATCTC
TCCGATTCTTTCCGGGGAATCTTTGCGATTCGTTCCTGTTGCCACAGAAG
GCTTTCCGGTACTCCCCTCTCCTTTCGTGCCCCGCGCAGACAGCCGCCCG
ACGCTCACACGTAGCTTCTTCGTGTTCCGTTGGGGTGTGTACACGACGAC
ACGCTGTTCTTTCCAACAGAACAATACAAAGCAGCGTAGTGCTTTCTCAA
TACATGCGTGTTCCAATACATGCATGCGTGGCTGCCTGTTTTGTGTGCAT
TTTTTTTCAGTTTGGGTCCATCCAATATCTCCAAGCAGAGGTTCTTCCGA
ACAAACACAGGCAAGATGTTCCGATCTTTTGACTGGATGGCTCGGTCGTT
CCGGCTTTCCGATCACACGACGTCTGTCACTCTGTCCTCCCCTGCACACA
TTGCTTGCGGCTCTCTGTCTGTCTGGATCTACGGTGAGAGGGCTCCATTT
TGGGTCTTCTCGGGCTCTCACAGGGCTCCATGTTCTCATTTCCATCTGTT
CCAGATCTATCTTTAGAGCTCGCTCTGTTATTTTCCGCTCACCGTTTCTC
TCTCATGCCTTCTCATTTTGCGTCTGGCTCGTTCATCACATCCGGCTCGG
TCGCACGGAACCTTCGCCCTTTCACACACGTTACATTATTTCGTGCCAGT
CTCTCTCTCCCCTCTCATATACCAATCTAACGTCGGTTCTTACAACAACA
ACACCAACAACAGCAGCCTGTTTCTCCCTCTCACATGTCCCACGGCGGTA
GTATTGTTCATTCCCGTTTTCGTTTCCGCTTTGTTGACCATTCCCGTACG
GCCGTTCGTTTACTGCATGGTTTCTTCGTGCTTTTTGCATCATTTACGCT
CGCCGCCTGTGCGCTCGCCGCCTGTGCGCTCGCCGCCAGTGCGCGTGTTT
GGCGCGTGTCCAATTTATTTGCGGAATCGCGCGGGACGCATCCCTTCCCA
CCCCCTCGGTGTCGCACCAAATTACCGCGCACGTAATAACAATAAAGAAC
AGCATCGTGCTTTCTCAATAAATGCATGCGTGTTCCAATACATGCGTGGC
TGCCTGTAAACTCTGTTGTTATGTGGTTGTTTCTGTTCACTTTGGGTCCA
TCCAATATATCTCCATGCAGAGGTTCTTCCAAGCAAACGCACGCACGCAT
CGTGCTTTCTCAATAAATGCATGCGTGTTCCAATACGTGCGTGGCTGTGC
CTGTAAACTCTGTTGTCATCGTGCTTTCTCAATAAATGCATGCGTGTTCC
AATACGTGCGTGGCTGCCTGTAAACTCTCTTGTCATGCGGTTGTTGTGTG
CAACTCTTTTCACTTTGGGTCCACTCAATATCTCCAAGCAGAGGTTCTTC
CAAATAAACGCAGGCACGTTTTCACTATCTAGTCTATGCTTATATATGCC
GATCTCATTGAGATAGACTGGCTAGATGGCCCGGTCCTTCTGGGTTTCTG
ATCACACGACGTCTGTCGCTCTGTCCTCCGCTGCACACATTTATTTGCGG
CTCTCCTCTCACCCGAGGCACTAGGTCTGGCCCTCTGTCGCTTCCCTGTC
TGTCTGTCTGGATCTATCTACGCTGAGAGGGCTCCATTTCGGGTCTTCTC
GGTCTCTCTCACAGCGCTCTACTTATTTCCTCGTTTCCATCTGTTCCTCG
CTGTTGTTTTCTTGCGTTATATACACGCGTTCGTCTCTCTGGGATCTCGC
ATGTATGTACGCCCCGAACATGCGTGTCTACAAGAATTTCATCTCTCTCC
GGGATCTTTTCAGGGCTGGCTTCGTATATCTCCGTTTCTCACATGCATGC
AAACAACCCTGAGCATGTTCATGGGAACGTACTTCACGGGAATCTCACAG
CCACGGCATGCCACAAACGAAGCCCCATTCAACAAACGCCGACTAACATC
GTGCATCAAACACCAAGTAACATTCGTCTTGCGGTACGCTTCTCTCAGCG
TGGCGGCGTGAGCCGCCCAAAAGCCTTGTATATATATGTGTTGTGTGTGC
TTCTCTCTCTCGCTGACGTCCTTTTCGCGGTGCCCAAGGACCGGTTCTCG
AGATTTGGTTGGCTCGATCATCTTTCCATCTGGAAGATCCGGGACACATT
ATGAAAAAGAATCCTATATGTTTGTTGGGCCATTAGCACCCCTAACTGTG
GCATTCGCATTCAGTGCATTTTCCGAATTTTGGTACCGAGCCAGGAACCT
TAGTTTTCTCGCTGGCACTGACGCATTTTCATTGGTCACCGGTGAGCTCA
GTCGATGCTAATAGTAATGACACACCTATCTTTGCCAACACCTGGCGTGG
AAGGAGACAGGGCGGCAACTCCATGGCATGCCAACACACCAGCATATGCG
AATGATACGTCAATGATCTATCAGTAAGCCTGAAGACCCAAAAAGCTTAA
ACGTTTGTCTCTCTTGCCTCCTGTTTGCCGTGTCGGTATCACTCTGTCGC
CGAAAAGAAGTGAGGATGAAAATGTCAAGTGCCTCTGAAGTGGTTGGGAC
ATTTCCTGAGCCAGTCTTCATGTATTCCCAGCATTTTAGCGACCGTGTTG
ATTCCCATACAGTGTGGGACAAGACACTGACATCACCTCCCGCGGCTGGT
GAGGCTACCCTCGCCATACTTGCCTCAAGAAAACTCCTTCCAATCCTGAT
TTTGAGCTTTTTTCCTTTGTTCTTCCCTACCCTGGAAGTAAAGGTCATTA
CCGACTCACACCCTGACGGGTTTGCTGGGTACCTGTTGAGCCGGAAACGA
TATCAATGTCCACGTACTGCTGTCGAGTGTAAGTTTCAACCAGGTGTGGA
AACACGTTTCTTTCTCCAGCCTACCGTATGTCGTTCGCCGCTCACGTGCC
TGCTGCACACGTGCACGCGACTATCCAACAGTACTACAATGCGTTCCGCT
GCCCACCCGTTTCCTGTCCCTGTGCACGTTATTACGCGAATCTGGCTTCA
AACTCTCGGCACACGGTCGGTATGCCTACGTGCGTCTCCCCGGTTCAATT
CGAACGAAAGTACCATATCGACCAGGCAATGTGTTTTCGCGCCTTACACT
CTTGTGCTACATATATTGCACATGACGGGGCGGTGTACTTGCCCCACGCT
GTCCTCGAACCATCGCGGCCTGCTGCAACGGGAATACCAATCAATGCCGA
GTCCCAACCCCACGGAGGTGATTCGCCCGTTCCAATGCCGCCCCCCCCCC
CCCGCCTTCCAGCCACCGCGGAGAGCCTGAACAACACTCTCATCGGCGGG
AGGAAGAGGAATTACTACCACGACGACATGTGGAATCTCAAGTACCTGCG
CAAGTTCAAGTGGGACCACCTGACGGAGAAGGTGGCCTACGAGCGGAGAG
TGCGGTCGCAGAAGCTGCGCCTTGAAACGATGCAGGCGAAGAG GTGAGCT
GGAGCACGCGCGTGTGCGGGGTGCTATTTCTCTATTTTTTTCAGTTAAAA
CATCCAATTGACTCTTCGCCAACGGGCTAATCGGTTTAACAATAAATAAA
TGTGTCTAACGGCGTGCACCCGCGGCTCTCCGAGTATTGTAAGATGATGA
CTGTGTATTTCGAAGGCGCACTTGCCAACTCACGCTGGCTGCCTCGGAAA
TCCCCAACCGCGGGCAACCATGCCTTTTCGTGCCTTCCCCACCAATGCTC
CTGCTGCTGCTGCTGCTGCTGTTGCTACTCTGCTGGCAACACCTCCGGTC
GTAATGTTTATCTTTGTTTCCCCCCGCGAAAACAACAGAGAAAACGCGCG
GTACGTGGAGCTGGTGGAGAGCGGGCGATCCTTCGCCAAGATGGAAGAGC
GCAAGAGAAAACGCAGACAGGATGGGGGCGACGACAACAACGCAGCATCA
GTAGCCCCCACCATCGGGGGGGGATCGCCGGCGGCAGCGGCGGCGGCAGC
GGCAACCAAGTCG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:579672..587036+
>mRNA_Ecto-sp6_S_contig100.761.1 ID=mRNA_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:579672..587036+ (Ectocarpus species6 EcLAC_371) back to top