mRNA_Ecto-sp6_S_contig100.761.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 3.600e-142
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 1

Query:   16 GYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            GYEQRHPGDGTMEEPATD QAQVSRGD D EKGPESAD N+QVD RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKK GGNSGKRY EGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER
Sbjct:   35 GYEQRHPGDGTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D7FRL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL0_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 9.440e-80
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 1

Query:   49 MEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLI 459
            MEEPATD QAQVSRGDRDPEKGPESAD NEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIAR  + S    L+
Sbjct:    1 MEEPATDPQAQVSRGDRDPEKGPESADDNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARGQSFSSAEKLL 137

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 224 bits (570), Expect = 1.030e-69
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1

Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS +KL++Y E  AKRGVVY+SR+PPFMKP K+KHL+ Q+G + RVYLV ED+A ++ R  AGGN   +YTEGW+EFEDKK+A++ A  LN   IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.300e-66
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 1

Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  KL+ + +   KRGVVYLSR+PPFMKP KVKHL+ Q G + R+YLV ED+ N + R  AGGN  + YTEGW+EFEDKK+AR  A  LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE  QAK+EN  Y++ VE  + F KMEER
Sbjct:   22 LSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 213 bits (543), Expect = 1.210e-65
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 1

Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  KL +Y E +AKRGVVY+SR+PP+MKP K+KHL+ ++G + R+YLV ED+  ++ R  AGGN   +YTEGWVEFE+KK+A+  A  LN   IGGRKR+YYHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 213 bits (543), Expect = 1.810e-65
Identity = 104/178 (58.43%), Postives = 133/178 (74.72%), Query Frame = 1

Query:  145 DARQPLNYKPL--SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            DA++P     L  S  K++ + +   KRGVVY+SR+PPFMKP KVKHL+ Q+G + R+YLV ED+ + + R  AGGN  + YTEGW+EFEDKK+A+  A+ LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   24 DAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A7S1TZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ85_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.520e-64
Identity = 99/168 (58.93%), Postives = 132/168 (78.57%), Query Frame = 1

Query:  169 KPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            K L    L +YN  +A+RGV+YLSRIPPFMKP KV+HL+  HG VTRV+L  ED++NR+AR+++GG+  KRY EGWVEF +KK+A+  A SLNNT IGG +R+YYH+D+WN+KYL+ FKWDHLTEK+AYERRVR  ++R E +QA+RENA  ++L + G++   ME R
Sbjct:   35 KTLDAAALAEYNAKMARRGVLYLSRIPPFMKPQKVRHLLAVHGEVTRVFLAAEDRSNRKARRRSGGSKAKRYDEGWVEFAEKKVAKRVALSLNNTKIGGSRRSYYHEDIWNIKYLKGFKWDHLTEKLAYERRVREHRMRAEMLQARRENAMLLDLADQGKALRAMEGR 202

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 3.670e-64
Identity = 97/166 (58.43%), Postives = 130/166 (78.31%), Query Frame = 1

Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED++  + R  AGGN  ++YTEGW+EFEDKK+A+  A+ LN TLIGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E V+  + F KM+ R
Sbjct:   21 LSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.450e-64
Identity = 100/183 (54.64%), Postives = 133/183 (72.68%), Query Frame = 1

Query:  133 NEQVDARQPLNYKPL---SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            N +  + +P  +KPL   S  K++ + +   KRGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+   + R  AGGN    YTEGW+EFEDKKIA+  A+ LN T IGGRKR+YYHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E  Q+K+EN  Y+E V+  + F KME R
Sbjct:    3 NMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185

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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 209 bits (531), Expect = 6.910e-64
Identity = 97/166 (58.43%), Postives = 129/166 (77.71%), Query Frame = 1

Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+A  + R  +GGN  ++YTEGW+EFE+KK+A+  A+ LN T IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KME R
Sbjct:   21 LSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5LDQ8_9PHAE	3.600e-142	95.89	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FRL0_ECTSI	9.440e-80	91.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A2D4BVT2_PYTIN	1.030e-69	64.46	Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i...	[more]
A0A5D6Y296_9STRA	3.300e-66	63.25	RRM domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A8K1FEZ1_PYTOL	1.210e-65	60.84	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WDP5_GLOUD	1.810e-65	58.43	RRM domain-containing protein n=1 Tax=Globisporang...	[more]
A0A7S1TZ85_9STRA	2.520e-64	58.93	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]
H3HB09_PHYRM	3.670e-64	58.43	RRM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A3R7J166_9STRA	4.450e-64	54.64	RRM domain-containing protein n=2 Tax=Phytophthora...	[more]
D0MVG4_PHYIT	6.910e-64	58.43	Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	0
Seed ortholog score	248.1
Seed ortholog evalue	4.7e-63
Seed eggNOG ortholog	2880.D7FRL0
Preferred name	ABT1
Model size	787
KEGG ko	ko:K14785
Hectar predicted targeting category	other localisation
GOs	GO:0000028,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001671,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007399,GO:0007417,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030234,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032781,GO:0032991,GO:0034462,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0060255,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097659,GO:0098542,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons	4
EggNOG free text desc.	small-subunit processome assembly
EggNOG OGs	KOG3152@1,KOG3152@2759
Ec32 ortholog description	Nucleotide-binding alpha-beta plait domain
Ec32 ortholog	Ec-12_002630.1
Cds size	783
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03009