prot_Ecto-sp13_S_contig10028.47.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10028.47.1
Unique Nameprot_Ecto-sp13_S_contig10028.47.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length324
Homology
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match: D8LSY3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY3_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 2.880e-179
Identity = 298/325 (91.69%), Postives = 302/325 (92.92%), Query Frame = 0
Query:    1 MTPKNLPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPKQ-IHPSYLNSYLQQQQLPQQQRQQHADQLQLTPAVSTTAKLLGRITGGANXXXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADLAESTNGRSSQRQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
            MTPKN PLFAPTRRLSSCLVALLTYGVAQAGEGALDQRP+Q IHPSYL    QQQ          A+QLQLTPAVSTTAKLL RITGGAN  XXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGAD AESTNGRSSQ+QHLDGVYVR WDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESR+SAGANRYGGSS NGLASAE QKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY
Sbjct:    1 MTPKNSPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPQQQIHPSYLQ---QQQLXXXXXXXXXAEQLQLTPAVSTTAKLLDRITGGANSHXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADFAESTNGRSSQQQHLDGVYVRGWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRASAGANRYGGSSGNGLASAEAQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 322          
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match: A0A6H5L781_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L781_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 1.690e-166
Identity = 291/324 (89.81%), Postives = 294/324 (90.74%), Query Frame = 0
Query:    1 MTPKNLPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPKQIHPSYLNSYLQQQQLPQQQRQQHADQLQLTPAVSTTAKLLGRITGGANXXXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADLAESTNGRSSQRQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
            MTPK  PLFAPTRRLSSCL+ALLTYGVAQAGEGALDQRPKQIHPSYL                   QLQLTPAVSTTAKLL RITG   XXXXXXXXXXXXXXXXXXXXXX AAPDAIEVSGADLAESTNGRSSQ+QHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSP AEPRVPAWKAK ESR+SAGANRY GSSDNGLASAE QKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY
Sbjct:    1 MTPKKSPLFAPTRRLSSCLIALLTYGVAQAGEGALDQRPKQIHPSYLQQXXX---XXXXXXXXXXXQLQLTPAVSTTAKLLERITGXXXXXXXXXXXXXXXXXXXXXXXXX-AAPDAIEVSGADLAESTNGRSSQQQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPGAEPRVPAWKAKAESRASAGANRYSGSSDNGLASAEAQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 320          
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match: A0A4D9D6H6_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.180e-18
Identity = 72/210 (34.29%), Postives = 108/210 (51.43%), Query Frame = 0
Query:  130 NGRSSQRQHLDGVYVR-EWDVNGAPHFKRR------------SKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPA--WKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
            N  SS R  ++GV+ R +WD NG  H+++             S        VHL++ GS+W+LHLD+D  L+ ++ L Y +V   +P RT R W +R  + W+    +R+          VP   ++ +EES S+A A          LAS  T           RL+P++  F LDAVG G+A P+LPF++M L A A QL +V++ NY
Sbjct:   70 NAPSSLRM-INGVFTRTDWDHNGRAHYEKVMTSEEMTLAQEFSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRV---------HVPGRQYEKREESASAAAA----------LASIPTPP---------RLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNY 250          
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match: A0A482SL66_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL66_9ARCH)

HSP 1 Score: 64.3 bits (155), Expect = 9.370e-8
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 0
Query:  168 VHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDA------ALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
            ++LF+TGS W L      + + +  LAYSE  +   +  T  W V++G+ +   P M +   +P+ +      K  E+              DN     ETQ    D+       + R+LLP Y  F+LDA+ +G+ +P+LPFFVMGL A A QL++VVSSNY
Sbjct:    1 MYLFWTGSVWALSYQ-SPHSNQSDLLAYSESNKPEIMSGT-SWYVKLGKKFELSPLMGV--NAPEKQ------KVNEDEE------------DN-----ETQADSTDSDNKEVLGVPRQLLPYYVAFMLDAIAVGLVMPLLPFFVMGLGADAFQLSMVVSSNY 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSY3_ECTSI2.880e-17991.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L781_9PHAE1.690e-16689.81MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D6H6_9STRA3.180e-1834.29MFS domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A482SL66_9ARCH9.370e-834.36MFS transporter n=1 Tax=archaeon TaxID=1906665 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.657
NoneNo IPR availableTMHMMTMhelixcoord: 287..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10028contigEcto-sp13_S_contig10028:2..3331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10028.47.1mRNA_Ecto-sp13_S_contig10028.47.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10028 2..3331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10028.47.1 ID=prot_Ecto-sp13_S_contig10028.47.1|Name=mRNA_Ecto-sp13_S_contig10028.47.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MTPKNLPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPKQIHPSYLNSY
LQQQQLPQQQRQQHADQLQLTPAVSTTAKLLGRITGGANNHRRRKHSSRH
QPAGGGGGGGGSAAPDAIEVSGADLAESTNGRSSQRQHLDGVYVREWDVN
GAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAE
VNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSA
GANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALP
VLPFFVMGLKATALQLAIVVSSNY
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