Homology
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match:
D8LSY3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY3_ECTSI)
HSP 1 Score: 508 bits (1307), Expect = 2.880e-179
Identity = 298/325 (91.69%), Postives = 302/325 (92.92%), Query Frame = 0
Query: 1 MTPKNLPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPKQ-IHPSYLNSYLQQQQLPQQQRQQHADQLQLTPAVSTTAKLLGRITGGANXXXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADLAESTNGRSSQRQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
MTPKN PLFAPTRRLSSCLVALLTYGVAQAGEGALDQRP+Q IHPSYL QQQ A+QLQLTPAVSTTAKLL RITGGAN XXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGAD AESTNGRSSQ+QHLDGVYVR WDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESR+SAGANRYGGSS NGLASAE QKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY
Sbjct: 1 MTPKNSPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPQQQIHPSYLQ---QQQLXXXXXXXXXAEQLQLTPAVSTTAKLLDRITGGANSHXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADFAESTNGRSSQQQHLDGVYVRGWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRASAGANRYGGSSGNGLASAEAQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 322
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match:
A0A6H5L781_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L781_9PHAE)
HSP 1 Score: 492 bits (1266), Expect = 1.690e-166
Identity = 291/324 (89.81%), Postives = 294/324 (90.74%), Query Frame = 0
Query: 1 MTPKNLPLFAPTRRLSSCLVALLTYGVAQAGEGALDQRPKQIHPSYLNSYLQQQQLPQQQRQQHADQLQLTPAVSTTAKLLGRITGGANXXXXXXXXXXXXXXXXXXXXXXXAAPDAIEVSGADLAESTNGRSSQRQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
MTPK PLFAPTRRLSSCL+ALLTYGVAQAGEGALDQRPKQIHPSYL QLQLTPAVSTTAKLL RITG XXXXXXXXXXXXXXXXXXXXXX AAPDAIEVSGADLAESTNGRSSQ+QHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSP AEPRVPAWKAK ESR+SAGANRY GSSDNGLASAE QKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY
Sbjct: 1 MTPKKSPLFAPTRRLSSCLIALLTYGVAQAGEGALDQRPKQIHPSYLQQXXX---XXXXXXXXXXXQLQLTPAVSTTAKLLERITGXXXXXXXXXXXXXXXXXXXXXXXXX-AAPDAIEVSGADLAESTNGRSSQQQHLDGVYVREWDVNGAPHFKRRSKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPGAEPRVPAWKAKAESRASAGANRYSGSSDNGLASAEAQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 320
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match:
A0A4D9D6H6_9STRA (MFS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H6_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 3.180e-18
Identity = 72/210 (34.29%), Postives = 108/210 (51.43%), Query Frame = 0
Query: 130 NGRSSQRQHLDGVYVR-EWDVNGAPHFKRR------------SKRGSRSSPVHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPA--WKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDAALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
N SS R ++GV+ R +WD NG H+++ S VHL++ GS+W+LHLD+D L+ ++ L Y +V +P RT R W +R + W+ +R+ VP ++ +EES S+A A LAS T RL+P++ F LDAVG G+A P+LPF++M L A A QL +V++ NY
Sbjct: 70 NAPSSLRM-INGVFTRTDWDHNGRAHYEKVMTSEEMTLAQEFSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRV---------HVPGRQYEKREESASAAAA----------LASIPTPP---------RLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNY 250
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Match:
A0A482SL66_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL66_9ARCH)
HSP 1 Score: 64.3 bits (155), Expect = 9.370e-8
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 0
Query: 168 VHLFFTGSEWMLHLDVDANLDINHCLAYSEVAEVNPLRTTRKWAVRVGQAWVRRPHMRLAETSPDAEPRVPAWKAKEESRSSAGANRYGGSSDNGLASAETQKAIDDA------ALSRRLLPLYAVFVLDAVGLGVALPVLPFFVMGLKATALQLAIVVSSNY 324
++LF+TGS W L + + + LAYSE + + T W V++G+ + P M + +P+ + K E+ DN ETQ D+ + R+LLP Y F+LDA+ +G+ +P+LPFFVMGL A A QL++VVSSNY
Sbjct: 1 MYLFWTGSVWALSYQ-SPHSNQSDLLAYSESNKPEIMSGT-SWYVKLGKKFELSPLMGV--NAPEKQ------KVNEDEE------------DN-----ETQADSTDSDNKEVLGVPRQLLPYYVAFMLDAIAVGLVMPLLPFFVMGLGADAFQLSMVVSSNY 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10028.47.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 4
M T P K N L P L F A P T R R L S S C L V A L L T Y G V A Q A G E G A L D Q R P K Q I H P S Y L N S Y L Q Q Q Q L P Q Q Q R Q Q H A D Q L Q L T P A V S T T A K L L G R I T G G A N N H R R R K H S S R H Q P A G G G G G G G G S A A P D A I E V S G A D L A E S T N G R S S Q R Q H L D G V Y V R E W D V N G A P H F K R R S K R G S R S S P V H L F F T G S E W M L H L D V D A N L D I N H C L A Y S E V A E V N P L R T T R K W A V R V G Q A W V R R P H M R L A E T S P D A E P R V P A W K A K E E S R S S A G A N R Y G G S S D N G L A S A E T Q K A I D D A A L S R R L L P L Y A V F V L D A V G L G V A L P V L P F F V M G L K A T A L Q L A I V V S S N Y 50 100 150 200 250 300 Expect = 2.88e-179 / Id = 91.69 Expect = 1.69e-166 / Id = 89.81 Expect = 3.18e-18 / Id = 34.29 Expect = 9.37e-8 / Id = 34.36 Sequence D8LSY3_ECTSI A0A6H5L781_9PHAE A0A4D9D6H6_9STRA A0A482SL66_9ARCH back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M T P K N L P L F A P T R R L S S C L V A L L T Y G V A Q A G E G A L D Q R P K Q I H P S Y L N S Y L Q Q Q Q L P Q Q Q R Q Q H A D Q L Q L T P A V S T T A K L L G R I T G G A N N H R R R K H S S R H Q P A G G G G G G G G S A A P D A I E V S G A D L A E S T N G R S S Q R Q H L D G V Y V R E W D V N G A P H F K R R S K R G S R S S P V H L F F T G S E W M L H L D V D A N L D I N H C L A Y S E V A E V N P L R T T R K W A V R V G Q A W V R R P H M R L A E T S P D A E P R V P A W K A K E E S R S S A G A N R Y G G S S D N G L A S A E T Q K A I D D A A L S R R L L P L Y A V F V L D A V G L G V A L P V L P F F V M G L K A T A L Q L A I V V S S N Y 50 100 150 200 250 300 Score = Score = Score = Score = Score = Score = Score = Score = 0.657 Score = Sequence TRANSMEMBRANE SIGNAL_PEPTIDE_C_REGION NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 284..306 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 26..30 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 31..283 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 307..324 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..30 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 15..25 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..14 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..30 None No IPR available TMHMM TMhelix coord: 287..309
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig10028.47.1 ID=prot_Ecto-sp13_S_contig10028.47.1|Name=mRNA_Ecto-sp13_S_contig10028.47.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp back to top