mRNA_Ecto-sp13_S_contig15312.3996.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.860e-18 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 133 RVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEVYKWNGKGKKRKA 312
RVLCIPASQ +ERVFS+AG VVT TR+R+DPE+VELM+FLR+VL EV +WNG G KRK+
Sbjct: 428 RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGNGNKRKS 487
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 8.510e-18 Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 97 AREYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEV 276
AREYP LA+LARRVLCIPA QA +ERVFS+AG VVT TR+R+DPE+V LMVFLR+ PE+
Sbjct: 488 AREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNTPPEL 547
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 6.250e-16 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 103 EYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEVYKWNGKGKKRK 309
EYP+LAALARRVL IP+SQA +ERVFS AG VTPTRSRL E+VEL+V+LR+V V +W ++K
Sbjct: 493 EYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKSATRKK 561
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: R7TXQ1_CAPTE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TXQ1_CAPTE) HSP 1 Score: 64.3 bits (155), Expect = 1.730e-11 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 100 REYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFL 255
R +P +A LA++ L IPA+ A +ERVFS AG +VTP RSRL+PE V ++VFL
Sbjct: 4 RNFPRIALLAKKYLAIPATSAPSERVFSTAGNIVTPKRSRLNPEKVNMLVFL 55
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI000DC13F08 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC13F08) HSP 1 Score: 66.6 bits (161), Expect = 8.300e-11 Identity = 30/59 (50.85%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 97 ARE--YPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVL 267
ARE YP ++ LA+++LCIPAS A +ERVFS AG ++TP R+++ P H+ +VFL++ L
Sbjct: 184 ARENVYPTISVLAKKILCIPASSASSERVFSRAGNIITPKRNKMTPHHLSALVFLKNNL 242
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A8B8G1X1_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8G1X1_9HEMI) HSP 1 Score: 65.5 bits (158), Expect = 9.390e-11 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 97 ARE--YPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRS 261
ARE YP ++ LA+ +LCIPAS A +ERVFS AG ++TP R+R+ P H+ +VFL++
Sbjct: 123 ARENVYPKISVLAKNILCIPASSASSERVFSTAGNIITPKRNRMTPYHLSALVFLKN 179
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI001C04A074 (E3 SUMO-protein ligase ZBED1-like n=3 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C04A074) HSP 1 Score: 67.4 bits (163), Expect = 1.160e-10 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 97 AREYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEVYK 282
A EYP+LA LARR LC+P + +ERVFS AG +VT RS L P+HV+ ++FL+ L V K
Sbjct: 561 AGEYPLLACLARRYLCVPGTSVSSERVFSTAGDIVTAQRSCLTPQHVDQLLFLQKNLAVVNK 622
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI000B933A0F (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B933A0F) HSP 1 Score: 63.9 bits (154), Expect = 1.520e-10 Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 106 YPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLR 258
YP LA LA+++LCIPAS A +ERVFS AG +++P R+R+ P H+ +VFL+
Sbjct: 81 YPTLAVLAKQILCIPASSASSERVFSTAGNILSPKRNRITPCHLSALVFLK 131
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D) HSP 1 Score: 63.9 bits (154), Expect = 3.050e-10 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 103 EYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFL 255
+P LA LARR LCIPA+ +ERVFSAAG VT RSRL P+HV +++FL
Sbjct: 117 RFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTPDHVNMLIFL 167
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI001BD4DD18 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD4DD18) HSP 1 Score: 63.9 bits (154), Expect = 3.050e-10 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 103 EYPMLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVL 267
EYP+LA LA+R LC+P + AERVFS AG +VT RS L EHV+ ++FL L
Sbjct: 112 EYPLLAKLAKRYLCVPGTSVSAERVFSTAGDIVTAQRSSLTTEHVDQLLFLHKNL 166 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15312.3996.1 >prot_Ecto-sp13_S_contig15312.3996.1 ID=prot_Ecto-sp13_S_contig15312.3996.1|Name=mRNA_Ecto-sp13_S_contig15312.3996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp MLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSback to top mRNA from alignment at Ecto-sp13_S_contig15312:2187..2543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15312.3996.1 ID=mRNA_Ecto-sp13_S_contig15312.3996.1|Name=mRNA_Ecto-sp13_S_contig15312.3996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15312:2187..2543+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15312:2187..2543+ >mRNA_Ecto-sp13_S_contig15312.3996.1 ID=mRNA_Ecto-sp13_S_contig15312.3996.1|Name=mRNA_Ecto-sp13_S_contig15312.3996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15312:2187..2543+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |