prot_Ecto-sp13_S_contig15312.3996.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15312.3996.1
Unique Nameprot_Ecto-sp13_S_contig15312.3996.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.970e-19
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    8 RVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEVYKWNGKGKKRKA 67
            RVLCIPASQ  +ERVFS+AG VVT TR+R+DPE+VELM+FLR+VL EV +WNG G KRK+
Sbjct:  428 RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGNGNKRKS 487          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 8.360e-14
Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 MLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVLPEVYKWNGKGKKRK 66
            +LAALARRVL IP+SQA +ERVFS AG  VTPTRSRL  E+VEL+V+LR+V   V +W     ++K
Sbjct:  496 LLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKSATRKK 561          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: R7TXQ1_CAPTE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TXQ1_CAPTE)

HSP 1 Score: 58.2 bits (139), Expect = 7.750e-10
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFL 48
            +A LA++ L IPA+ A +ERVFS AG +VTP RSRL+PE V ++VFL
Sbjct:    9 IALLAKKYLAIPATSAPSERVFSTAGNIVTPKRSRLNPEKVNMLVFL 55          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D)

HSP 1 Score: 60.5 bits (145), Expect = 1.070e-9
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFL 48
            LA LARR LCIPA+   +ERVFSAAG  VT  RSRL P+HV +++FL
Sbjct:  121 LAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTPDHVNMLIFL 167          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A8B8G1X1_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8G1X1_9HEMI)

HSP 1 Score: 59.7 bits (143), Expect = 2.480e-9
Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRS 50
            ++ LA+ +LCIPAS A +ERVFS AG ++TP R+R+ P H+  +VFL++
Sbjct:  131 ISVLAKNILCIPASSASSERVFSTAGNIITPKRNRMTPYHLSALVFLKN 179          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI000B933A0F (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B933A0F)

HSP 1 Score: 58.5 bits (140), Expect = 3.120e-9
Identity = 26/48 (54.17%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLR 49
            LA LA+++LCIPAS A +ERVFS AG +++P R+R+ P H+  +VFL+
Sbjct:   84 LAVLAKQILCIPASSASSERVFSTAGNILSPKRNRITPCHLSALVFLK 131          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI000DC13F08 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC13F08)

HSP 1 Score: 60.1 bits (144), Expect = 3.660e-9
Identity = 25/51 (49.02%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRSVL 52
            ++ LA+++LCIPAS A +ERVFS AG ++TP R+++ P H+  +VFL++ L
Sbjct:  192 ISVLAKKILCIPASSASSERVFSRAGNIITPKRNKMTPHHLSALVFLKNNL 242          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A2S2NF35_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NF35_SCHGA)

HSP 1 Score: 56.6 bits (135), Expect = 1.110e-8
Identity = 23/49 (46.94%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRS 50
            ++ LA+ +LCIPAS   ++RVFS AG ++TP R+R+ P H+  +VFL++
Sbjct:   64 ISVLAKNILCIPASSTSSKRVFSTAGNIITPKRNRMTPYHLSALVFLKN 112          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: UPI0011B399B0 (zinc finger BED domain-containing protein 1-like n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B399B0)

HSP 1 Score: 58.9 bits (141), Expect = 1.630e-8
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFL 48
            L+ LAR+ LCIPA+   +ERVFSAAG  VT  RSRL PEHV +++FL
Sbjct:  539 LSKLARQYLCIPATSVPSERVFSAAGLTVTRLRSRLTPEHVNMLIFL 585          
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Match: A0A8B8GQ90_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8GQ90_9HEMI)

HSP 1 Score: 58.2 bits (139), Expect = 1.880e-8
Identity = 24/49 (48.98%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    2 LAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRS 50
            ++ LA+ +LCIPAS A +ERVFS AG ++TP R+++ P H+  +VFL++
Sbjct:  191 ISVLAKNILCIPASSASSERVFSTAGNIITPKRNQMTPYHLSALVFLKN 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15312.3996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE3.970e-1971.67Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI8.360e-1460.61Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
R7TXQ1_CAPTE7.750e-1059.57Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ca... [more]
UPI0007B8209D1.070e-963.83zinc finger BED domain-containing protein 1-like n... [more]
A0A8B8G1X1_9HEMI2.480e-951.02zinc finger BED domain-containing protein 1-like n... [more]
UPI000B933A0F3.120e-954.17zinc finger BED domain-containing protein 1-like n... [more]
UPI000DC13F083.660e-949.02zinc finger BED domain-containing protein 1-like n... [more]
A0A2S2NF35_SCHGA1.110e-846.94Zinc finger BED domain-containing protein 1 (Fragm... [more]
UPI0011B399B01.630e-861.70zinc finger BED domain-containing protein 1-like n... [more]
A0A8B8GQ90_9HEMI1.880e-848.98zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 2..50
e-value: 8.1E-14
score: 51.2
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 2..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15312contigEcto-sp13_S_contig15312:2298..2501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15312.3996.1mRNA_Ecto-sp13_S_contig15312.3996.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15312 2187..2543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15312.3996.1 ID=prot_Ecto-sp13_S_contig15312.3996.1|Name=mRNA_Ecto-sp13_S_contig15312.3996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
MLAALARRVLCIPASQAHAERVFSAAGQVVTPTRSRLDPEHVELMVFLRS
VLPEVYKWNGKGKKRKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf