prot_Ecto-sp13_S_contig1313.2548.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 3.900e-179 Identity = 334/341 (97.95%), Postives = 335/341 (98.24%), Query Frame = 0
Query: 88 MSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDLEGRIDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RQXXXXXXXXXXXGYSDDDIGDGVGVVDPEVAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQGHG 426
MSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDL GRIDD XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ XXXXXXXXXX YSDDDIGDGVGVVDPEVAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMV+RRRFQGHG
Sbjct: 1 MSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDLGGRIDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRQGXXXXXXXXXXXYSDDDIGDGVGVVDPEVAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVDRRRFQGHG 341
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.650e-90 Identity = 170/230 (73.91%), Postives = 174/230 (75.65%), Query Frame = 0
Query: 241 ISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRG------IYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKSLRPPQRFFNPEE--------------------------------------IKQASDEAMVERRRFQGHG 426
+++K L E LCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRG IYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKS+RPPQRFFNPEE IKQASDEAMVERRRFQGHG
Sbjct: 8 LAEKKLQKNELLWHTTVQLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGVRGVCLIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNARKSIRPPQRFFNPEESTTLLPLKMSLLFECDDTKPNQNDIRNEFRTDALRDDQIKQASDEAMVERRRFQGHG 237
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A6H5JKS5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS5_9PHAE) HSP 1 Score: 166 bits (420), Expect = 7.120e-46 Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0
Query: 1 MSDDDGLRDSDSGDEPQGQDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK--SRRGDMSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDLEGRIDD 171
MSDDDGLRDSDS DEPQGQ+VE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SRRGDMSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDL GRIDD
Sbjct: 1 MSDDDGLRDSDSEDEPQGQNVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRGDMSRFYDEMAEVDDDAEEDYDDKDRANANELTAMERDMHERIARRQEQSKAFMEQPLEEQAKQTMRRLGVRLPESRNDLGGRIDD 173
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A7S3QHY2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QHY2_9STRA) HSP 1 Score: 159 bits (401), Expect = 6.970e-41 Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDL-VSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQG 424
V QQ+LLP +SD +L++ C TGKE SL + +MNK ++F G+P G+TSAV A +KG +Y+E+ +EPAV+ AI G+RG+ +R VPI DMT V++V+S + KPV++++++R+ R + DLA V V G + V+Q +PRIDL +S E R R++++PPQ+FFN +EI A + V R+RF G
Sbjct: 158 VTQQSLLPSVSDPTLWMFNCPTGKEASLVIQIMNKCVSFARQGKPLGITSAVA-AQSKGRVYVESYSEPAVREAITGIRGLMAYSMRLVPIRDMTTVMTVKS--KKKPVKKSEWVRMSRGQFKGDLALVKMVRESGTKCVIQCVPRIDLTLSELTPEEARIRRRTVKPPQKFFNAQEIA-ALGKLSVTRQRFPG 347
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A7S3QHX5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QHX5_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.110e-39 Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDL-VSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQG 424
V QQ+LLP +SD +L++ C TGKE SL + +MNK ++F G+P G+TSAV A +KG +Y+E+ +EPAV+ AI G+RG+ +R VPI DMT V++V+S + KPV++++++R+ R + DLA V V G + V+Q +PRIDL +S E R R++++PPQ+FFN +EI A + V R+RF G
Sbjct: 158 VTQQSLLPSVSDPTLWMFNCPTGKEASLVIQIMNKCVSFARQGKPLGITSAVA-AQSKGRVYVESYSEPAVREAITGIRGLMAYSMRLVPIRDMTTVMTVKS--KKKPVKKSEWVRMSRGQFKGDLALVKMVRESGTKCVIQCVPRIDLTLSELTPEEARIRRRTVKPPQKFFNAQEIA-ALGKLSVTRQRFPG 347
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A6S8Z740_9STRA (Transcription elongation factor SPT5 n=9 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8Z740_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.450e-38 Identity = 87/194 (44.85%), Postives = 131/194 (67.53%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDL-VSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQG 424
V QQ+LLP +SD +L++ C TGKE SL + +MNK ++F G+P G+TSAV A +KG +Y+E+ +EPAV+ AI G+RG+ +R VPI DMT V++V+S + KPV++++++R+ R + DLA V V G + V+Q +PRIDL +S E R R++++PPQ+FFN +EI A + V R+RF G
Sbjct: 171 VTQQSLLPSVSDPTLWMFNCPTGKEASLVIQIMNKCVSFARQGKPLGITSAVA-AQSKGRVYVESYSEPAVREAITGIRGLMAYSMRLVPIRDMTTVMTVKS--KKKPVKKSEWVRMSRGQFKGDLALVKMVRESGTKCVIQCVPRIDLTLSELTPEEARIRRRTVKPPQKFFNAQEIA-ALGKLSVTRQRFPG 360
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: B7G376_PHATC (Transcription elongation factor SPT5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G376_PHATC) HSP 1 Score: 158 bits (400), Expect = 1.920e-38 Identity = 89/194 (45.88%), Postives = 126/194 (64.95%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSAD-AETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQG 424
VAQQ+L+P +SD S+++V C GKE L +MNK +A G+P G++SA+ A +KG +YLE+ +EPAV AI G+RG+ +R VPI DMT V++V S R KPV++N+++R+ R Y DLA V +V G + VVQ +PR+DL AE R RK++RPPQ+FFNP+EI + R+RF G
Sbjct: 197 VAQQSLVPSVSDPSMWMVSCANGKEHELVCQIMNKCVAMARQGRPVGISSAIA-AQSKGKIYLESFSEPAVVDAIQGVRGLLQYTMRLVPIGDMTTVMTVTS--RKKPVQKNEWVRMTRGHYKHDLALVKDVKESGLKCVVQCVPRLDLTLADLPPAEARMRRKTVRPPQKFFNPQEIAALGRHGLT-RQRFPG 386
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A7R9ZDV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDV4_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.670e-38 Identity = 85/196 (43.37%), Postives = 126/196 (64.29%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDL-VSLSADAETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQGHG 426
VAQQ+L+P +SD S+++ C GKE L +MNK++AF G+P G+T AV A +KG +Y+E+ +EPAV A+ G+R + +R VPI DMT V++V + KPV++N ++R+ R Y DLA V V GG + ++Q +PRIDL +S E R R+++RPPQ+FFNP+EI ++ R+RF G G
Sbjct: 166 VAQQSLVPSVSDPSMWMFSCAPGKEQELVYQIMNKSIAFARQGKPLGITGAVA-AQSKGRIYVESYSEPAVIEAVEGIRNMMQYSMRLVPISDMTTVMTV--VPKKKPVKKNDWVRMSRSHYKGDLALVKAVRDGGLKCIIQCVPRIDLTLSDLPPEEARVRRRTVRPPQKFFNPQEIAALGKHSL--RQRFPGLG 356
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A7S2UHW9_9STRA (Transcription elongation factor SPT5 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHW9_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.120e-37 Identity = 88/196 (44.90%), Postives = 125/196 (63.78%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAE-TRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQGHG 426
V+QQ+L+P +SD SL++ C+TGKE L +MNK +A+ A G+P G+TSAV A TKG +Y+E+ +EPAV A+ G+R + +R VPI DMT V++V + KPV++N ++RL R Y DL V V G + VVQ +PR+DL AE R R+++RPPQ+FFN +EI A+ R+RF G G
Sbjct: 81 VSQQSLVPSVSDPSLWMFSCQTGKEDELVYQIMNKCIAYAAQGKPLGITSAVA-AQTKGKIYVESYSEPAVIEAMQGIRNLMQYSMRLVPINDMTTVMTV--VPKKKPVKKNDWVRLTRGHYKGDLGLVKSVRDSGLKCVVQCLPRLDLTLSDLPAEDARIRRRTVRPPQKFFNAQEIAALGKHAL--RQRFPGMG 271
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Match: A0A1E7FT68_9STRA (Transcription elongation factor SPT5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT68_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.930e-37 Identity = 80/194 (41.24%), Postives = 126/194 (64.95%), Query Frame = 0
Query: 232 VAQQALLPGISDKSLFVVECKTGKETSLCLSVMNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADA-ETRNARKSLRPPQRFFNPEEIKQASDEAMVERRRFQG 424
V+QQ+L+P +SD SL+++ C TGKE + + +MNK +A+ G+P G+ A+ A +KG +Y+E+ +EPAV AI G+RG+ +R +PI DMT V++V + KPV++N+++R+ R Y DLA V+ V G + +VQ +PR+DL +LS E R RK++RPPQ+FF+ +E+ R+RF G
Sbjct: 202 VSQQSLVPSVSDPSLWMISCMTGKEQEMVMQIMNKCVAYARQGRPLGICGAIA-AQSKGRIYIESYSEPAVVEAITGVRGMLQYTMRLIPIGDMTTVMTV--VPKKKPVKKNEWVRMTRGHYKGDLALVIAVRESGLKCIVQCVPRLDLAALSLPPDEARIRRKTVRPPQKFFSEQELAALGYADRRHRQRFPG 392 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1313.2548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig1313.2548.1 ID=prot_Ecto-sp13_S_contig1313.2548.1|Name=mRNA_Ecto-sp13_S_contig1313.2548.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bpback to top |