Homology
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
D7FYY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY7_ECTSI)
HSP 1 Score: 144 bits (363), Expect = 5.770e-36
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 2
Query: 650 RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAIISGGN 868
RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVE+GTGISREQILSAIISGGN
Sbjct: 136 RNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEMGTGISREQILSAIISGGN 208
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A7S1UHZ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHZ5_9STRA)
HSP 1 Score: 83.6 bits (205), Expect = 1.280e-14
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLG-PVLLFGLAFCLAIPLVEIGTGISREQILSAI 853
MV RNPNLLA +P G+GGA AK DT +SYV+AATRP+G P L G AF LA P +E TG+ R+Q LS I
Sbjct: 134 MVVRNPNLLATKPDGWGGAGGAKEDTFYLSYVVAATRPIGKPALALG-AFALATPFIEGVTGVPRDQFLSII 204
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
B7FNV7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNV7_PHATC)
HSP 1 Score: 68.6 bits (166), Expect = 1.270e-9
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAII 856
MV +NP LLA+ P+G GGA + TMQ SY++ TRP GP LL+GL F L P +E TGI + +++ +
Sbjct: 115 MVQQNPGLLALPPSGAGGADSVTDQTMQFSYLVGYTRPFGPFLLYGLLFLLFDPFLEYLTGIPIKTTITSAL 186
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A7R9UE42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE42_9STRA)
HSP 1 Score: 65.1 bits (157), Expect = 1.620e-8
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 2
Query: 689 GGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQIL 844
GGA AK DT MSYVIA TRPLGPVLL GL L++PLVE TGI R ++L
Sbjct: 125 GGATGAKDDTFYMSYVIAFTRPLGPVLLAGLIAALSVPLVEGLTGIPRAELL 176
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A7S2MUE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUE2_9STRA)
HSP 1 Score: 64.3 bits (155), Expect = 6.790e-8
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGI 826
MV RNP LLA+ P AA A TMQ SY++AATRP GPVLL G+ L +P +E TGI
Sbjct: 158 MVQRNPGLLAIPPAN---AAKADGQTMQFSYIVAATRPAGPVLLPGVLTLLCVPAIEAVTGI 216
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A7S2K6C2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6C2_9STRA)
HSP 1 Score: 62.4 bits (150), Expect = 2.110e-7
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 2
Query: 644 VTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGIS-REQIL 844
V RNP L++V PTG+GGA A +T+ +SYV+ ATR G V L LAF L PL+E TG+ RE IL
Sbjct: 124 VLRNPALMSVAPTGYGGADGAGQETVVLSYVVDATRDGGQVWLSLLAFLLLTPLLEQVTGVHFREAIL 191
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A7S4IU94_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IU94_9STRA)
HSP 1 Score: 60.1 bits (144), Expect = 2.260e-6
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTG-----FGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGIS-REQILSAI 853
++ RNP LL ++P G +GGAA A +T+ +SYVIAATRPLG L GL + P ++ TG+ R+ L A+
Sbjct: 160 LLIRNPGLLGIKPDGWGEEGYGGAATAGPETIALSYVIAATRPLGNFGLVGLLALVLTPGIDAATGLGLRDAFLGAL 236
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
B5YMT8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMT8_THAPS)
HSP 1 Score: 59.3 bits (142), Expect = 3.220e-6
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLG---PVLLFGLAFCLAIPLVEIGTGISREQILSAI 853
MV RNP LL+V+P AA+A TMQMSYV+ TRP+G PVL+ GL LA+P +E G+ + ++LS++
Sbjct: 153 MVIRNPGLLSVKPVI---AASADDLTMQMSYVVDFTRPIGAAGPVLILGL---LAVPALESALGVGKGELLSSL 220
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
A0A6H5KAE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAE4_9PHAE)
HSP 1 Score: 57.0 bits (136), Expect = 4.110e-6
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 3
Query: 3 LGYDGSVFRATFEAFTEVFGEEETKGFV 86
LGYDGSVFRATFEAF+EVFGEEETKG V
Sbjct: 107 LGYDGSVFRATFEAFSEVFGEEETKGCV 134
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Match:
K0RXR5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXR5_THAOC)
HSP 1 Score: 57.8 bits (138), Expect = 5.170e-6
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 2
Query: 641 MVTRNPNLLAVRPTGFGGAANAKSDTMQMSYVIAATRPLGPVLLFGLAFCLAIPLVEIGTGISREQILSAIIS 859
MV RNP LL V P A S TMQ+SY+++ TRPLG L G+ L IP++E G+ R +++ ++++
Sbjct: 107 MVMRNPGLLGVEPKD---AVTVTSSTMQLSYIVSFTRPLGNAGLAGIGSLLLIPVIEGTLGLQRGELIGSLLN 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10223.246.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 10
0 1 Expect = 5.77e-36 / Id = 98.63 Expect = 1.28e-14 / Id = 59.72 Expect = 1.27e-9 / Id = 45.83 Expect = 1.62e-8 / Id = 65.38 Expect = 6.79e-8 / Id = 54.84 Expect = 2.11e-7 / Id = 52.94 Expect = 2.26e-6 / Id = 42.86 Expect = 3.22e-6 / Id = 47.30 Expect = 4.11e-6 / Id = 92.86 Expect = 5.17e-6 / Id = 39.73 Sequence D7FYY7_ECTSI A0A7S1UHZ5_9STRA B7FNV7_PHATC A0A7R9UE42_9STRA A0A7S2MUE2_9STRA A0A7S2K6C2_9STRA A0A7S4IU94_9STRA B5YMT8_THAPS A0A6H5KAE4_9PHAE K0RXR5_THAOC back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10223.246.1
>prot_Ecto-sp13_S_contig10223.246.1 ID=prot_Ecto-sp13_S_contig10223.246.1|Name=mRNA_Ecto-sp13_S_contig10223.246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
MINTSILTCVSSFDSLFTSVCYPPSPCPSPVHAVGGATGISCSGNRMVTR back to top mRNA from alignment at Ecto-sp13_S_contig10223:689..4602+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10223.246.1 ID=mRNA_Ecto-sp13_S_contig10223.246.1|Name=mRNA_Ecto-sp13_S_contig10223.246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3914bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10223:689..4602+ (Ectocarpus species13 EcNAP12_S_4_19m)GCCTCGGCTACGACGGGTCGGTTTTCCGGGCCACATTCGAGGCCTTCACG
GAGGTGTTCGGGGAGGAAGAGACGAAAGGGTTTGTGTGCCGTAGGTTGCA
TGACGTGAGATACCATACCCCCACCCTTGACCGAGAGCTTCAATGCTCGA
TTTCTCCACAACTAAGAGGATGCCGAGATCAAAGTGATGCGTTTTCGGCA
AGCTTTGAGTCGAGGCGGTTCCAACGCGACATTTTCCGGCGCCGTTGCTA
TTTTTCGCTTGAGGGTAGTCGAGCTTTGAAAAGCGACCCAGGGGGATGAA
GGCTGAACTTGACTGACGGCCCAAAGTATCGTATGCAACCTACGGGATTT
TCTGTTGAAGGTGTCGACAGCCTTGGGACTACTACTGATGTATGGTATCA
TACGTGGTGAAGGATGAACTTGAGTGACGGTGGGGGTTGAATGTGGTTGG
GCTGCTTTTTGTCTGGTAGTCTCATGGTGATGCATTTCAGCGGATTTATG
TC ATGATCAATACCTCGATTTTGACCTGTGTTTCTTCTTTTGACTCGCTG
TTCACCTCTGTCTGCTACCCCCCGTCCCCGTGCCCATCCCCTGTACACGC
CGTGGGTGGTGCAACCGGTATCTCTTGCTCGGGAAACAGGATGGTGACTC
GCAACCCCAACCTCCTTGCG GTGAGTCTTATGTATGCCGCCTCCTCAGAC
TGTAGTGTGATTCCTTCGGTTGACGTTGCCGCCACTATACGGGACATACG
TACAATAGAAAACGGGTGCTTTTTCGGATGTGTTTTTGCTTGATGATGTG
CGTGCAGTCTACAGCAGTAGTCAAGAGTTTTTCAAGAGCACTCCTGTGTC
GTTCGGTAGAATCAGCGGGCCCCCTTCGATGTATGATCTGCGCGGGAGGG
CGGAAAGAGGTGGGCAAGAGAAGCATCGATGAAAGGGGGCAGCCTGCCTG
CTTGCGGACTGTGTAGAGGTTAGAAAAAATGGCCGCATGGTGCAGAACTC
ATGTGCAGATCCCCCTTCATCAGGGTACAATCTGCCCACACGACAGTGAT
GTGTCTGCAATAATTCAGATTGCGACTCTGCTTTCTCTGCGGTGTGCTTG
ACTGTTGCGTTGGAGACGATCCCCTCTTTCCACGATGAGCTTCCACCGAT
CAGATTGCGACTCTTGCGCGTTCTGCCGGGTGTGTGCCTGGTTTCTTTAT
TGCAGGTGCGGCCGACCGGTTTCGGCGGCGCGGCTAACGCCAAGTCGGAC
ACGATGCAGATGAGCTACGTCATCGCCGCCACTAG GCAAGTCCTACATGT
GGTCGCCTCGTGGTCCATTTTCTTTTATTCTTGTATGACATCGTGCTTGC
TTGCCCGTAGGCAGGTTGGACTGGTTACAGGGAGAGTGGCGCTCCGTTCT
TGTCTAGCCTCACAGTTTTCCCCGATCTTATGCGGTCGCCCGGTCAATCT
AGTTTGTACCCTCGAAAACTCCTAGTGGTCAGGGTCAGGGCGTTCGAATC
CCGGCGAAAGCGAGCTTTTCTTGCAAACGGAGAGTTTCTCTCGCTTCCGT
TCCTGGCCTGGGTGGAAACCGCTAGTTCGTGTGCACACAGAGGGAAGAGA
ATGCTGCACTCTTCTCGCATTAGCAATTGAAGGCAAAGTACCGCTAGGAG
GGGTGGGTAGGGGGGAACTCCTATGTGTGACCACGGGTTGGCATAAACGG
CACAAGCGCGTGCTGTGAGGGCTGATGTGACGTGAAGACAAGAATATTTA
TATGCGTACCGCTCGCCCTAGAATGGATCGTTGGTGATTTTGCGTATGTT
GACCAACACACGCCTTGTTTTGGAGTTCCCACTACGGTGTGTAGTGAGTC
TTAAAACAGGGTGTGCCACTTTGAACACGTCAAAGCCTCCGCCTCGTCCC
GCGTTGTCTCCTATCTCGTTGCCCCTCTGGAGTCAATTTTTCAATTTCCT
TGTTCTTCACTCCGGACTCAAAACCCTTTAACCACGGCCAGTCGTTTATT
CTGGCTTCAATGTTGATCAACTGCAGACCCCCTCCAATTGTGGAATGGAA
CGCGTTTGTTAATGTAATTATTTTTTGCAGGCCTCTAGGACCCGTCCTCC
TCTTCGGCCTGGCCTTCTGCCTTGCCATTCCCTTG GTGAGTGATGCATGA
AGAAATTAGTGTTTCTGCAGCTGCTCTGCCCTTACTACCTTACGTAAGTA
GCCCAGTATCATTGCCTCCATCCTCTCAACGCTCCGAGTATCGCGGGCAA
TGTGGTGGCTTGTCGTCCTTGTGCGAGGAGCTCGTCCACACGTCCACACC
GCTTTCGTGGTGAGGGTGCTCGCCACTGGTCACGTGGCACAGAGCGGCGT
GGTTTTGCAGTGGGTATGACTCGGCCGTGGGTAGCCGTTGAGCAGCATTA
GCGGCTGCGCCGCGTTGTCTGATATTCAGCGCTGGGTAGAAAAATTCTCT
TGGTGTCGCTTTTCCTCGCCTGCGCCAATGATACGCGACATCACCCACGA
AACTGCCGCAATCTTCTCGGTTTCTTCCCTGTGTTCCGGAATGCTTGGCC
TGAATACTACAACGGACATACTCTAACGCATTTTTCGTTCGTTCAGTTCG
CGACAGATTCGACATCTATAGTGGCAACCTTTGTTTCGCCTCCGTTGGAA
CCCCTGCATACTATTACTCCGTGTTGAAAATGACAATATTCCCCACCTTG
TATGTACGATACATCATGTATCACCGCGCTGACAGGTGGAGATAGGCACC
GGCATTTCGCGGGAGCAGATCCTCTCGGCGATCATCTCCGGCGGCAACTG
A CCTGGCGTGGACCGTCGTACCCGGTGTCTGGGTGTGAAGGAAGACGCTG
ATTTTTTTTGTAGATTGGCCTTAGCAGAACCCAAGACGACACCCCTGTTT
TCGCAGAAAGCCAACAGCAAGGAAATGTGTTATCAGATGTGAATCCGATC
TCGCTATTCTAGGAGTATCGTGTCCTGTTGGGGTACACCGCTGCTGGCTG
TCGTCGAACGATGTCTGCGTGACGCAGTGCTTCCTCTGCGCCTTTTGAGA
TTACACTGCCCAGCGTGTGTTTTGCCGCATGTAGTGCGAGTTTGAGAAAT
TTTGAATTTGATGTTGTCTCTCATTTCCCCATGTACCGATGATACTTGGA
GGACGCCCAAAAACACCCCATGTGGTATTTTTGTGCAATTTATGAGCGTA
CGGGAGTCGCTTGGTTTTCAACAGGCGCCGGTGGTGGAGGGACGACGGGG
GTCAAGGGCGGCGCAGCAGAAGGCAACATACTCGTGTGCATAGGTCCCGT
GTTTGGATACCGTTACGTTGCATCAGTCGTATTTCCATGAGGGGGGGAGG
AGGATAGATGTGACAGCGTCGGCAGCAAGCACCACAAGCAGGCATCAAGG
GCGTATTTCTTTTTGTGGAGACTGTTCTTATTGCGGAGACACTTGTCTCG
ACGTGTGAAATTGGCGGGGATTCGCCCGGACAGTTATCGAGCGCGCTATT
TAGCCAGCACCACCAGGCCATGGAGCGGACTGGAGAACCAATTCTTTGCA
ATCACTCAACATGTGTTCTTCCGCTGACTTTCCGCGTGAGCGACGTGGCC
CCTTTGCGTAGGGCCTAGGCTTGATAGCCATCTGCTGGTTCTGCCAAGGT
CTTCATGGCAATTTTGTGGAAACGTTTTCTCTCCGCATCCTTATATAGAG
TTTTTTTTCGTTTTTTTCTGTTGCTGCGGTGTTCTTTCTTTGGACTCAAT
TGCTCGCCAACAAAGAAGTACCCACCGATGGCCATACCGAACAAAAAAAA
GTAAACTCCGCCAAGGGAAAACGATAAAGGACATGGTGATGAGAGCGTCT
ACACGGAGCACGGATGCTACCACCGCGAATCGGCCGCCACCACTGCAAAC
AACCTCTTCCACCG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10223:689..4602+
>mRNA_Ecto-sp13_S_contig10223.246.1 ID=mRNA_Ecto-sp13_S_contig10223.246.1|Name=mRNA_Ecto-sp13_S_contig10223.246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10223:689..4602+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top