prot_Ecto-sp13_S_contig100.18.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig100.18.1
Unique Nameprot_Ecto-sp13_S_contig100.18.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
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BLAST of mRNA_Ecto-sp13_S_contig100.18.1 vs. uniprot
Match: D7G341_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G341_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 4.850e-79
Identity = 150/207 (72.46%), Postives = 156/207 (75.36%), Query Frame = 0 
Query:    1 MMVLSAVLVDGATPSISTSAXXXXXXXXXXXXXXXXVRTVASGEDGRSAAVLDPCGLEAAACIQDADCRDCEARRRGQGGMGSAESAGRGDRLPRVSRDELRINHSLFSGGAGSPSNKPCENVGTVACGRMTTALGAVSAEEGYATASENPCRDKPVVKELFACRMASSECELEDAPCATQNPRRLQPREAPSEFVDGEGYRHARSL 207
            MMVL AVL DGAT SIS +A XXX             RTV  GED RSA VL+PCG EAAAC+QDADCRDCEARR G+GGMG  ES  RGDR PRV  DE RIN SL SGGAGSPSNK CE  G VAC RMTTALGAV AEEGYAT SEN CRD PVVKELFACRMAS+ CELEDAPC TQNPRRLQ REA S+ VD EGY HAR L
Sbjct:    1 MMVLLAVLADGATTSISPAAAXXXA-----------ARTVGLGEDRRSAVVLNPCGPEAAACVQDADCRDCEARRMGEGGMGGEESTVRGDRRPRVIWDEFRINPSLLSGGAGSPSNKLCEKFGAVACARMTTALGAVGAEEGYATVSENQCRDNPVVKELFACRMASAGCELEDAPCVTQNPRRLQQREASSQSVDHEGYGHARPL 196
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G341_ECTSI4.850e-7972.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..301
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig100contigEcto-sp13_S_contig100:11664..14974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig100.18.1mRNA_Ecto-sp13_S_contig100.18.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig100 2725..14974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig100.18.1 ID=prot_Ecto-sp13_S_contig100.18.1|Name=mRNA_Ecto-sp13_S_contig100.18.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MMVLSAVLVDGATPSISTSAAAEAQAAAAAAAAAAAVRTVASGEDGRSAA
VLDPCGLEAAACIQDADCRDCEARRRGQGGMGSAESAGRGDRLPRVSRDE
LRINHSLFSGGAGSPSNKPCENVGTVACGRMTTALGAVSAEEGYATASEN
PCRDKPVVKELFACRMASSECELEDAPCATQNPRRLQPREAPSEFVDGEG
YRHARSLSAWRSGSGAWRATCRNCSGSGCSSRGDDGEECCTSSVIACGVP
CSETGWKVPCVVVEGESRAHGDIARRLEIMVNGKVAAFSEDGAKRSTKCG
P*
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