Homology
BLAST of mRNA_Ecto-sp13_S_contig100.18.1 vs. uniprot
Match:
D7G341_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G341_ECTSI)
HSP 1 Score: 270 bits (689), Expect = 4.850e-79
Identity = 150/207 (72.46%), Postives = 156/207 (75.36%), Query Frame = 0
Query: 1 MMVLSAVLVDGATPSISTSAXXXXXXXXXXXXXXXXVRTVASGEDGRSAAVLDPCGLEAAACIQDADCRDCEARRRGQGGMGSAESAGRGDRLPRVSRDELRINHSLFSGGAGSPSNKPCENVGTVACGRMTTALGAVSAEEGYATASENPCRDKPVVKELFACRMASSECELEDAPCATQNPRRLQPREAPSEFVDGEGYRHARSL 207
MMVL AVL DGAT SIS +A XXX RTV GED RSA VL+PCG EAAAC+QDADCRDCEARR G+GGMG ES RGDR PRV DE RIN SL SGGAGSPSNK CE G VAC RMTTALGAV AEEGYAT SEN CRD PVVKELFACRMAS+ CELEDAPC TQNPRRLQ REA S+ VD EGY HAR L
Sbjct: 1 MMVLLAVLADGATTSISPAAAXXXA-----------ARTVGLGEDRRSAVVLNPCGPEAAACVQDADCRDCEARRMGEGGMGGEESTVRGDRRPRVIWDEFRINPSLLSGGAGSPSNKLCEKFGAVACARMTTALGAVGAEEGYATVSENQCRDNPVVKELFACRMASAGCELEDAPCVTQNPRRLQQREASSQSVDHEGYGHARPL 196
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100.18.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M M V L S A V L V D G A T P S I S T S A A A E A Q A A A A A A A A A A A V R T V A S G E D G R S A A V L D P C G L E A A A C I Q D A D C R D C E A R R R G Q G G M G S A E S A G R G D R L P R V S R D E L R I N H S L F S G G A G S P S N K P C E N V G T V A C G R M T T A L G A V S A E E G Y A T A S E N P C R D K P V V K E L F A C R M A S S E C E L E D A P C A T Q N P R R L Q P R E A P S E F V D G E G Y R H A R S L S A W R S G S G A W R A T C R N C S G S G C S S R G D D G E E C C T S S V I A C G V P C S E T G W K V P C V V V E G E S R A H G D I A R R L E I M V N G K V A A F S E D G A K R S T K C G P * 50 100 150 200 250 300 Expect = 4.85e-79 / Id = 72.46 Sequence D7G341_ECTSI
Match Name E-value Identity Description
D7G341_ECTSI 4.850e-79 72.46 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M M V L S A V L V D G A T P S I S T S A A A E A Q A A A A A A A A A A A V R T V A S G E D G R S A A V L D P C G L E A A A C I Q D A D C R D C E A R R R G Q G G M G S A E S A G R G D R L P R V S R D E L R I N H S L F S G G A G S P S N K P C E N V G T V A C G R M T T A L G A V S A E E G Y A T A S E N P C R D K P V V K E L F A C R M A S S E C E L E D A P C A T Q N P R R L Q P R E A P S E F V D G E G Y R H A R S L S A W R S G S G A W R A T C R N C S G S G C S S R G D D G E E C C T S S V I A C G V P C S E T G W K V P C V V V E G E S R A H G D I A R R L E I M V N G K V A A F S E D G A K R S T K C G P * 50 100 150 200 250 300 Score = Score = Score = Score = Score = Sequence SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 32..301 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..13 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..31 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..31
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig100.18.1 ID=prot_Ecto-sp13_S_contig100.18.1|Name=mRNA_Ecto-sp13_S_contig100.18.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp back to top