Homology
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A6H5JTK0_9PHAE (Replication protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE)
HSP 1 Score: 283 bits (723), Expect = 1.410e-87
Identity = 163/178 (91.57%), Postives = 164/178 (92.13%), Query Frame = 1
Query: 1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGGNNN-TGHYXXXXXXXXXXXXXXRDVKPKVANNPYGSSNKQANNPYAGG 531
MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGP PKIGDPINFSEDSSA VK ELGGG NNN TGHY XX XXXXXXXXRDVKPKVANNPYG+SNKQ AGG
Sbjct: 1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPAPKIGDPINFSEDSSARVKPELGGGSNNNNTGHYGXXSKPXXXXXXXXRDVKPKVANNPYGASNKQXXXXXAGG 178
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
D7FUU2_ECTSI (Rep-A_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU2_ECTSI)
HSP 1 Score: 237 bits (605), Expect = 2.140e-75
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 1
Query: 103 MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGG-NNNTGHYXXXXXXXXXXXXXXRDVKPKVANNPYGSSNKQANNPYAGG 531
MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGG NNNTG+Y XXXXXXXXXXXXXRDVKPKVANNPYG++NKQANNPYAGG
Sbjct: 1 MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGSSNNNTGNYGXXXXXXXXXXXXXRDVKPKVANNPYGAANKQANNPYAGG 144
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A7S3XQ94_HETAK (Replication protein A subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ94_HETAK)
HSP 1 Score: 122 bits (306), Expect = 6.720e-28
Identity = 62/115 (53.91%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFS 345
MANL S G+I QI+ G G PT+QV+++KK+ AG DR+RL++SDGQ++AQ MLATQ N ++SS +L+ELCI+ L++Y+VN VQ +R++I L ++V SGP PK+GDP N S
Sbjct: 1 MANLTS-GSIQQIVNGEV--TGLTPTLQVINVKKVQGAGADRFRLIISDGQYYAQCMLATQLNHLVSSNELQELCIVKLTNYVVNNVQGRRIVIGLAVEVVSGPVPKVGDPQNSS 112
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
I2FRR5_USTH4 (Replication protein A subunit n=1 Tax=Ustilago hordei (strain Uh4875-4) TaxID=1128400 RepID=I2FRR5_USTH4)
HSP 1 Score: 102 bits (254), Expect = 5.850e-21
Identity = 64/147 (43.54%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 7 NLISRGAINQIMGGATGAAGY-NPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSE--DSSAGVKQELGGG---GNNNTGH 408
N +S+GAI Q++ A A NP Q++S+KK+ + T DR+R++LSDG H+AQSMLA+Q+ M+ SG+L++ C++ +S Y N VQN+R++ILL L+V PT ++G P N + S GVKQE G G GN+N G+
Sbjct: 4 NDLSQGAIAQMIQTADPANSVQNPICQILSIKKIQASATSASNVGDRYRIILSDGVHYAQSMLASQKRSMVESGELEKHCLVRISQYASNSVQNRRILILLDLEVAHKPTADRLGSPTNVDDAIKSEGGVKQEGGAGNALGNSNLGN 150
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A317XXN4_9BASI (Replication protein A subunit n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XXN4_9BASI)
HSP 1 Score: 101 bits (251), Expect = 1.460e-20
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 13 ISRGAINQ-IMGGATGAAGYNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSEDSSAG-----VKQELG 381
++ GAI Q I T NP Q++S+KK+ T DR+R++LSDG H+AQ+MLA+Q+ M+ SG+L++ CI+ + Y N VQN+R++ILL L V SGP P ++G+PIN E AG VKQE G
Sbjct: 6 LTHGAIAQMIQSSDTSNLVQNPVCQILSIKKIQATSTTAANVGDRYRIILSDGVHYAQAMLASQKRTMVESGELEKNCIVKVLQYAANSVQNRRILILLDLQVLSGPAPDRLGNPINVDEAQKAGGEAGPVKQESG 141
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A835Z8X4_9STRA (Replication protein A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X4_9STRA)
HSP 1 Score: 100 bits (250), Expect = 2.020e-20
Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 13 ISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGT--DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINF 342
+++GAI +I+ A+G G+ P VQV+S+KKMT A +R+R+V+SDGQH QSML T QN++I+SG + E C+I L ++I+N + K ++I+L+ V SG PKIGDP F
Sbjct: 6 VTQGAIQRIIT-ASGQDGFLPIVQVLSIKKMTAAAGQGERYRVVVSDGQHHQQSMLTTSQNDLITSGQMVEGCLICLDEFILNQIGAKSIVIILRASVLSGAMPKIGDPTAF 116
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
R9P362_PSEHS (Replication protein A subunit n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P362_PSEHS)
HSP 1 Score: 96.7 bits (239), Expect = 6.200e-19
Identity = 56/136 (41.18%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 7 NLISRGAINQIMGGATGAAG--YNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSE--DSSAGVKQELG 381
N +S+G+I Q++ A A+ NP Q++S+KK+ + T DR+R++LSDG H+AQ+MLA+Q+ M+ SG+L++ C++ ++ + N VQN+R++ILL LDV PT ++G+P N E + GVKQE G
Sbjct: 122 NDLSQGSIAQMIQTADPASSSVQNPVCQILSIKKIQASATSASNVGDRYRIILSDGVHYAQAMLASQKRSMVESGELEKHCLVRITQFASNSVQNRRILILLDLDVVHKPTADRLGNPTNVDEAVKTEGGVKQEGG 257
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A1A6A3J9_9TREE (Replication protein A subunit n=2 Tax=Kwoniella TaxID=490731 RepID=A0A1A6A3J9_9TREE)
HSP 1 Score: 93.2 bits (230), Expect = 8.490e-18
Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGT---DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGV------------KQELGG 384
MA+ ++ G + A G P +QV+S+KK+ G DR+RL+LSDG+HF Q+M+ATQ N ++ S +L + +I L+ Y+ N VQ ++L+I+L L++ KIG+P N + +AG KQE+GG
Sbjct: 1 MASPLTAGFCELVFNSADAPEGVTPILQVLSVKKINAPGATGQDRYRLILSDGKHFIQAMIATQLNNLVDSKELDKNVVIKLTGYVTNAVQGRKLVIILNLEIVPWNGEKIGNPTNLEQQQNAGAGASTSAPAQAVPKQEVGG 143
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A0D1CUI6_USTMA (Replication protein A subunit n=10 Tax=Ustilaginaceae TaxID=5268 RepID=A0A0D1CUI6_USTMA)
HSP 1 Score: 92.4 bits (228), Expect = 1.580e-17
Identity = 56/136 (41.18%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 7 NLISRGAINQIMGGATGAAG--YNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSEDSSA--GVKQELG 381
N +S+GAI Q++ + A+ NP Q++S+KK+ + T DR+R++LSDG ++AQ+MLA+Q+ M+ SG+L++ C++ ++ + N VQN+R++ILL LDV PT ++G P N E A GVKQE G
Sbjct: 4 NDLSQGAIAQMIQTSDPASSSVQNPVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQAMLASQKRSMVESGELEKNCLVRVTQFASNSVQNRRILILLDLDVVHKPTEDRLGHPTNVEEAVKAEGGVKQEGG 139
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match:
A0A7S2JN56_9EUKA (Replication protein A subunit n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JN56_9EUKA)
HSP 1 Score: 92.4 bits (228), Expect = 1.630e-17
Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 55 GAAGYNPTVQVVSLKKMTNAGT---DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSED--SSAGVKQELGGGGNNNTGHY 411
G A P +QV+ +K++ N G DR+RL LSDG F QSMLATQ N+++++G+L++ C++ L+++I NVVQN+++II L + V SGP P IG+P +S GV G NN G Y
Sbjct: 20 GHAEKQPLLQVLDVKRIGNPGAPQGDRYRLQLSDGVFFTQSMLATQLNDLVANGELQQHCVVQLTEHICNVVQNRKIIIALGMIVKSGPVPVIGNPRQLESPPITSDGVT------GGNNPGQY 137
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.41e-87 / Id = 91.57 Expect = 2.14e-75 / Id = 95.83 Expect = 6.72e-28 / Id = 53.91 Expect = 5.85e-21 / Id = 43.54 Expect = 1.46e-20 / Id = 44.12 Expect = 2.02e-20 / Id = 48.21 Expect = 6.20e-19 / Id = 41.18 Expect = 8.49e-18 / Id = 36.36 Expect = 1.58e-17 / Id = 41.18 Expect = 1.63e-17 / Id = 43.55 Sequence A0A6H5JTK0_9PHAE D7FUU2_ECTSI A0A7S3XQ94_HETAK I2FRR5_USTH4 A0A317XXN4_9BASI A0A835Z8X4_9STRA R9P362_PSEHS A0A1A6A3J9_9TREE A0A0D1CUI6_USTMA A0A7S2JN56_9EUKA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 238.8 Seed ortholog evalue 2.3e-60 Seed eggNOG ortholog 2880.D7FUU2 Preferred name RFA1 Model size 808 KEGG ko ko:K07466 KEGG Pathway ko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460 KEGG Module M00288 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000228,GO:0000278,GO:0000280,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005662,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006268,GO:0006278,GO:0006279,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007059,GO:0007063,GO:0007088,GO:0007127,GO:0007129,GO:0007131,GO:0007140,GO:0007141,GO:0007275,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009555,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010638,GO:0010639,GO:0010833,GO:0010948,GO:0016043,GO:0016567,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030491,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032392,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0035861,GO:0036211,GO:0042162,GO:0042592,GO:0043047,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0043601,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0045132,GO:0045143,GO:0045184,GO:0045786,GO:0045839,GO:0045875,GO:0045930,GO:0045935,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051026,GO:0051052,GO:0051054,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060249,GO:0060255,GO:0060341,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070192,GO:0070647,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0071922,GO:0071923,GO:0080090,GO:0090304,GO:0090734,GO:0097159,GO:0098687,GO:0098813,GO:0098847,GO:0106111,GO:0106112,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902969,GO:1903046,GO:1903047,GO:1903827,GO:1903828,GO:1904356,GO:1904358,GO:1905405,GO:1905412,GO:1905634,GO:2000112,GO:2000278,GO:2000573,GO:2001251,GO:2001252 Exons 6 EggNOG free text desc. DNA recombination EggNOG OGs COG1599@1,KOG0851@2759 Cds size 636 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03000,ko03032,ko03400
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462511.23715-UTR-Ecto-sp13_S_contig10153:2..66 1681462511.23715-UTR-Ecto-sp13_S_contig10153:2..66 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10153 3..66 - 1681462511.2647054-UTR-Ecto-sp13_S_contig10153:875..983 1681462511.2647054-UTR-Ecto-sp13_S_contig10153:875..983 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig10153 876..983 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462511.2755694-CDS-Ecto-sp13_S_contig10153:983..1093 1681462511.2755694-CDS-Ecto-sp13_S_contig10153:983..1093 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10153 984..1093 - 1681462511.285921-CDS-Ecto-sp13_S_contig10153:1469..1632 1681462511.285921-CDS-Ecto-sp13_S_contig10153:1469..1632 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10153 1470..1632 - 1681462511.2976148-CDS-Ecto-sp13_S_contig10153:2010..2101 1681462511.2976148-CDS-Ecto-sp13_S_contig10153:2010..2101 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10153 2011..2101 - 1681462511.31011-CDS-Ecto-sp13_S_contig10153:2578..2766 1681462511.31011-CDS-Ecto-sp13_S_contig10153:2578..2766 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10153 2579..2766 - 1681462511.322416-CDS-Ecto-sp13_S_contig10153:5143..5227 1681462511.322416-CDS-Ecto-sp13_S_contig10153:5143..5227 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10153 5144..5227 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10153.181.1
>prot_Ecto-sp13_S_contig10153.181.1 ID=prot_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDG back to top mRNA from alignment at Ecto-sp13_S_contig10153:3..5227-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10153.181.1 ID=mRNA_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10153:3..5227- (Ectocarpus species13 EcNAP12_S_4_19m)ATGGCTAACTTAATCAGCCGCGGTGCGATCAATCAGATCATGGGCGGGGC
CACCGGCGCGGCGGGCTACAACCCGACTGTTCAG GTATGGGTGCCCATTA
CACAGACACCTTTTTGAACGACAGCCTCCCTCTTTTTTTATGATGGGTGT
GCGGAGCCACAGGGACGGTTAGGTTTGCCAACGCTCCAACGCCTCTGTCC
CCTCGTTGACCGACTGTGTTTTCATCGGGTGTGCCATGCGTGGTTGTAAG
AGGGTTGTCGCCTCGGTTGAAACTGCGTGGTAGGTGTGTTGGTCAGGTAA
AGCAATCGCGGGAAAGCGGGACGAATTTGAAAATTGTCCTTGGCGGGGAT
GCCCCTTTCCTACACACGGTCATCCGGTCACGAAGGAGCCTTGCGTCAAC
ACCCCGTGTGGTTACTCGTTCTTTTGGCGTATCCATGCTCGATGACTTTG
TTGCCCCGGGGATCGAAGCCGTAAACATCACGTCCAGCACCATGAAAAGT
TGTGTTGTTTTTGCGAAGGAGAGTTCGTTTCAACACTCACAAACTTCAGT
TCTTGGACGTAGTTTTGATGTTCGCCAGCCGTTCGGTGAAAGGGGTGCAT
CGTGCATCGGATAACCGACTCTGTACTTAGTGATACGTTTGTACGACGCT
TCGTCTAGCGGGGGCTAATGCACCCGTCGTTCGCTTCATTTTCAAAGCAT
GCACTGCTGTACTGCTGTAGCACAAAAAGCTCTGTCAACAACAGAGTGCT
GATTGTAAATACAGAAGTTTTGAAATGAAAGAATTTTCGAAATTTGAATT
TAAGAAGAATGGAGGTCGCAGTCTCCGGACAAAAGCGTAGGTACTACTTG
TGTAATAATCTTTTAGGCAGAGCACCCAAACGTAGGGCAATATTTCTGTT
GGACCAACACAACACAAAAAATTCATCGAAGTTTTAAAGGGGTGGAGCCG
GATAGATGCCGTTCTCCCACCAATCACATGTCGCTGATTGAGCGATGGGC
ACGACGCTCGCGGGAGAATCCCCGAAATTCTCTGGCACAGCAGCACCACA
CACACCACGCAGAGAACATACGAGACAACCAGCACAGCAGCATACGGACT
GCTGTTGGCCAACGGCAGCCAAAGGCACACATCATGGAAGGCGTTGGGTG
TGACTCTTGCAACCCGTTGCCTGCTGTCGGCAGCACAAGCGAGTGACGAC
GCAAGTCAATCTGCGGTCCGTCTGCATCACCTCAATCAACCTACCGATCT
TTGGAGCTTCCCACACAGACGCATCCCCACACAACAGAGACAACGAGACG
TCCACACTGCTGCACTAAGGCCGGCCGAATGCACACGTCATGGCTGGCGT
CGGAAGCTATTTTTAGACCCCGAGACCTGCTGCTAGCAGCGCAAGCGAGG
GAACCTGCGCGTGCACACAAGTCAAATATGTCTGCGGTCTGTTCGTCTGC
AGGCCGCGATCTTTACTTCCATCACAGAAGCCCCCCCGACACAGAGACAA
TTAGATGTACACAATGCTGTAGGTCGAGGGTGACCAAATGTACACATCGT
AGAGGCATCGGGGGCGGTTTTTAGAGCCCGTTGCCCGCTGCGAGCAGCGA
ATCTAAGAAAGTAAGTGCACAACACCCACATCCTGCACGGCGGCAGCAGC
CACAGCAGCAACAAGCAGAAGCAGCAGCTGCTGCTGCTCTAGCAGCAGCT
ACATGTAGCTGATGATTATGAGAGCTAAATAGCGCTCTCAGTCATCCTCT
GACTAGCTCGTGGTATCGGGTGAGGTTTGAGCGTGTGCACTGGTGACCTC
AGGTGGTGGCGTAGGCTCCACCCATATCTGTCACGGCTTGATTTGATGTC
TCTCTCCGCCCCTTCTTTTCGCGCTTAGACCCCTATGTATGGGAGTGGAG
CCATCTTTTCACGCTCGAAATTTGACCATTTTGAGAGCTGAGGGGCAGTC
TTCTCCCCCCAGTCTGCCGCGTCCTCTTCGCAAGAAGGTGCAGTGACCCG
TGTTGGTGTCGAGACGAAGGCGCTTGTTGCATAAAAGAAAATCATCGAGC
ACGATGAGGAATGAAGTGCGCGCAACCTTCGGACCCCCTAACAAGACCGC
CGTTTCAAGGCCCGCAGGCTCTCCTTAGGTCATCCTTTCTCACGCTGTAG
GCATCGCCGAGGCTCTTGCCACGCGCGCACATGAGATGGGCACAAGTAGC
TGGTCCGTTATTCGCGGCACTCACCAACCAGCTCATGAAACAACACAAAA
TCTACCACAAAACAAGCGTCGGTGGGCGTCAGCCTCTACTCTGTGCGTTT
CGTCACACTTGAACCGAAAAAGAAAGCAGCAGCCGGTTTCTTCTCAACCA
CTAGAAAGACACATACCCTTAGACTGCTGTGGATTTTCTCGGACGGACGG
TAGTCTTTGATTGGATGCATGTTTTTAAAGCAAATATACACATGCATGCA
AACGACATCAGGTGGTGAGCCTGAAGAAGATGACCAACGCGGGCACCGAC
CGATGGCGGCTGGTGCTGTCCGACGGGCAGCACTTCGCGCAGTCCATGCT
GGCCACTCAGCAGAACGAGATGATCTCCAGCGGTGATCTGAAAGAGCTGT
GCATCATCACCCTCAGCGACTACATCGTCAATGTCGTACAGAACAAGAG G
TGGGGGGGAGTGTGCATATGCCTGAACGTGGATGTACAAGACTTCCTTTT
GTATCATTGCCGAGTTTTATTTTTCAAGCCTGGTCTCGAAACATGGAGAC
AAGCGCACTACGTGTGTACATGTATTGCCGCATAATCTGTTGCCTCTGAG
CTGTCCAAACACAGCACCGGTGCGACGAGCCGGTTCATTGAGGAAAGTTG
GAAGATCGGCTCCCAGGATTGATTCAATTTTAATGTCGCTTCGTGTTCCG
GCTACACGCTATGCAACCAGCCATCGAAAGGTCCGATTTCCTGTAGGTGT
TCCTACGTATCCCCAGCAAAGCTTCCTGCTGTCCTTGCACAGCAGAACTG
TACCACCTATCACATTACCTAAATATGCCGTTCAATTTCAAACTGTTCAC
CATGCTATATCAGTACTGCATGCAGATATCATCACCCAATGACACCCATC
CCGTGCCTTTTTCGGAACACGCACAGGCTTATCATCTTGTTGAAGCTCGA
CGTCACCTCTGGTCCTACGCCCAAGATTGGCGACCCCATCAATTTCTCGG
AGGATTCTTCGGCGGGG GTGAGAGAAACATGCAGGCGTACACAACAGAGT
CGGCCGTACAAATGAGAGATATGCCCTGGGAGAGAGTGAGTGAAAGAGAG
ACAAAGAGGAACTGAGAGAGACATGGACTGAGAGAGAGGAAGAGAGAGAG
AGAGAGACGGGCTGAGAGAGAGAGGAAGAGATAGGGAGAGAGAGACAGCT
GAGAGAGAGAGACAGATAGACAGACAGACAGAGACAGAGACAGAGACGGA
CAGGCAGACAGACAGAGGCACGCCGAGAGGGGAAAGAGCCGCAGGCCAAA
GCGAACTCTTTCTTTTCATCACGGGCCAATTAATTGCCTGTTGGGGCTCA
ACCTTCCCCGCCACAACTTTCCATGCCATGCCTACGCGAAACCAGGTGAA
GCAAGAGCTGGGAGGCGGCGGCAACAACAACACCGGCCATTACGGTGGGG
GGTCGAAGCCCAACACCGGAGGATACGGAGCAGGACGGGACGTCAAGCCG
AAGGTGGCAAACAACCCCTACGGCTCCTCCAACAAACAGGCGAACAACCC
TTACGCAG GTGCGGTTGGTTGATCTTGGGGTGCTTTCGTTGTGGTTGATC
TTGCGGTGCTGTCGTAATTGTTGATCTTGCGGTGCTATCGTTATGGTTGA
TCTTGCGGTGCTGTCGTTATGGTTGATCTTGCTGCTGCTGCTGTGGCATT
AACCAGTCTATGCTGGTGTTGGTCGTTGATAGTGCAGTGGCGAACTTCCA
TTGAAAGAAGACGAAAAAGAGGGTCGAGCCGGCGTTGTGACCCCCAACCA
CCCCGAAAGTGGTGTATAACCCGGACAGAAATCAGAAAGCGATTGAACGC
GAGACAAGACAAGGATGTGATCCACCACATCGCTCCTCACCGTCTAAAAA
TGCTTGTGTACGCACATACATTTGGGGGCGTCAGGCGGCGGTAACAACAA
CAACTACGGCGGGGGAGGGGGAAACTACGGCGGCGGGGGCGGGGGCGGGG
GCGGGGGGGGCCCGGGGCGGCGCAGCCAACAACCCTTACGCTAA CCGCGG
AAGCTCGAACAGCGGGCCGGTGCAGAGGCAGAGCCAGGACAGCGCGTACA
TGCCCATATCGGCGATCAACCCCTACCAGAACCGCTGGACGATCAAGGCC
AG GTGAGAAGAGAAGGGGAGGATATCGAGAAGGGGGGGAACAAGGGATTG
GAAAGGGAGAAAGCGAAGGGGCGAGAGACGGGGGAAACGAGACAATTTAC
ATGGGAAGGGGAGGGAAGAGGTGGAGAGTTTTTTTAGAGCAAAGCACAAC
AGGGTGCATGAAGCGATCGATAGAAGGAATGCTATCAAGAGGTAGGTTCT
GTTTTGGTACATGGACGGCTTTTTTTATGTCTGGCTGAGAAGCACTTTGT
TCGTGAGCAGGTCAACGGCATCCACGTCAATACTCAGTGCCGAAGTTTTG
GCGTTTGCCCACTAGAGGTCGCTGTAGAGGCGAAGGGATGATGTTTGTGT
GGTTGTCTCCTCACCGAAGGTGCTACTGCTACTGTACCTCGATATGGTAT
ACCTTTGTTACACACTGGAGGTGTTTATTTTCTCCCTCGGCTTCTCCTCC
CTGGAGATGAACCATGTAGTCCCACTTTCAGCAGCGTCGTGCTCGTCGTT
TCTCTAGAGAATTTCTGCTTGCAATTACGTTCGTAAACGGTTTTGTATTT
TTTCCGTCCTCGACTTTGTCGGTGTTGGTTTGCTTCGTTTTGGTCATAAC
GAAGAGCTATTGGACATGCGCGTGCTGCCGTATACTCTCATGGGGACTCT
CACAAGGAGGTACGTGTGACTTGTCATGAGACAACCGCAGCACAAGCAGT
GTGTTGGATTGTGTCGGTACCGGCGTTGCCGGGTTGCGTTGCGATCTCAT
GAGACGACCACAGTGTGGCTAATTCTGGCGGCGCTGTCATTGGCCTGGGT
TGCGACGACAGGATCACCAAGAAGGGAGACATGCGTCAGTGGAACAACGC
CCGGGGTTCGGGGACCCTTTTCTCG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10153:3..5227-
>mRNA_Ecto-sp13_S_contig10153.181.1 ID=mRNA_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10153:3..5227- (Ectocarpus species13 EcNAP12_S_4_19m) back to top