mRNA_Ecto-sp13_S_contig10153.181.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10153.181.1
Unique NamemRNA_Ecto-sp13_S_contig10153.181.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A6H5JTK0_9PHAE (Replication protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 1.410e-87
Identity = 163/178 (91.57%), Postives = 164/178 (92.13%), Query Frame = 1 
Query:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGGNNN-TGHYXXXXXXXXXXXXXXRDVKPKVANNPYGSSNKQANNPYAGG 531
            MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGP PKIGDPINFSEDSSA VK ELGGG NNN TGHY XX   XXXXXXXXRDVKPKVANNPYG+SNKQ     AGG
Sbjct:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPAPKIGDPINFSEDSSARVKPELGGGSNNNNTGHYGXXSKPXXXXXXXXRDVKPKVANNPYGASNKQXXXXXAGG 178
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: D7FUU2_ECTSI (Rep-A_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU2_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 2.140e-75
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 1 
Query:  103 MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGG-NNNTGHYXXXXXXXXXXXXXXRDVKPKVANNPYGSSNKQANNPYAGG 531
            MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGG  NNNTG+Y XXXXXXXXXXXXXRDVKPKVANNPYG++NKQANNPYAGG
Sbjct:    1 MTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGVKQELGGGSSNNNTGNYGXXXXXXXXXXXXXRDVKPKVANNPYGAANKQANNPYAGG 144
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A7S3XQ94_HETAK (Replication protein A subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ94_HETAK)

HSP 1 Score: 122 bits (306), Expect = 6.720e-28
Identity = 62/115 (53.91%), Postives = 88/115 (76.52%), Query Frame = 1 
Query:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFS 345
            MANL S G+I QI+ G     G  PT+QV+++KK+  AG DR+RL++SDGQ++AQ MLATQ N ++SS +L+ELCI+ L++Y+VN VQ +R++I L ++V SGP PK+GDP N S
Sbjct:    1 MANLTS-GSIQQIVNGEV--TGLTPTLQVINVKKVQGAGADRFRLIISDGQYYAQCMLATQLNHLVSSNELQELCIVKLTNYVVNNVQGRRIVIGLAVEVVSGPVPKVGDPQNSS 112
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: I2FRR5_USTH4 (Replication protein A subunit n=1 Tax=Ustilago hordei (strain Uh4875-4) TaxID=1128400 RepID=I2FRR5_USTH4)

HSP 1 Score: 102 bits (254), Expect = 5.850e-21
Identity = 64/147 (43.54%), Postives = 95/147 (64.63%), Query Frame = 1 
Query:    7 NLISRGAINQIMGGATGAAGY-NPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSE--DSSAGVKQELGGG---GNNNTGH 408
            N +S+GAI Q++  A  A    NP  Q++S+KK+  + T      DR+R++LSDG H+AQSMLA+Q+  M+ SG+L++ C++ +S Y  N VQN+R++ILL L+V   PT  ++G P N  +   S  GVKQE G G   GN+N G+
Sbjct:    4 NDLSQGAIAQMIQTADPANSVQNPICQILSIKKIQASATSASNVGDRYRIILSDGVHYAQSMLASQKRSMVESGELEKHCLVRISQYASNSVQNRRILILLDLEVAHKPTADRLGSPTNVDDAIKSEGGVKQEGGAGNALGNSNLGN 150
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A317XXN4_9BASI (Replication protein A subunit n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XXN4_9BASI)

HSP 1 Score: 101 bits (251), Expect = 1.460e-20
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 1 
Query:   13 ISRGAINQ-IMGGATGAAGYNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSEDSSAG-----VKQELG 381
            ++ GAI Q I    T     NP  Q++S+KK+    T      DR+R++LSDG H+AQ+MLA+Q+  M+ SG+L++ CI+ +  Y  N VQN+R++ILL L V SGP P ++G+PIN  E   AG     VKQE G
Sbjct:    6 LTHGAIAQMIQSSDTSNLVQNPVCQILSIKKIQATSTTAANVGDRYRIILSDGVHYAQAMLASQKRTMVESGELEKNCIVKVLQYAANSVQNRRILILLDLQVLSGPAPDRLGNPINVDEAQKAGGEAGPVKQESG 141
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A835Z8X4_9STRA (Replication protein A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.020e-20
Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 1 
Query:   13 ISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGT--DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINF 342
            +++GAI +I+  A+G  G+ P VQV+S+KKMT A    +R+R+V+SDGQH  QSML T QN++I+SG + E C+I L ++I+N +  K ++I+L+  V SG  PKIGDP  F
Sbjct:    6 VTQGAIQRIIT-ASGQDGFLPIVQVLSIKKMTAAAGQGERYRVVVSDGQHHQQSMLTTSQNDLITSGQMVEGCLICLDEFILNQIGAKSIVIILRASVLSGAMPKIGDPTAF 116
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: R9P362_PSEHS (Replication protein A subunit n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P362_PSEHS)

HSP 1 Score: 96.7 bits (239), Expect = 6.200e-19
Identity = 56/136 (41.18%), Postives = 90/136 (66.18%), Query Frame = 1 
Query:    7 NLISRGAINQIMGGATGAAG--YNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSE--DSSAGVKQELG 381
            N +S+G+I Q++  A  A+    NP  Q++S+KK+  + T      DR+R++LSDG H+AQ+MLA+Q+  M+ SG+L++ C++ ++ +  N VQN+R++ILL LDV   PT  ++G+P N  E   +  GVKQE G
Sbjct:  122 NDLSQGSIAQMIQTADPASSSVQNPVCQILSIKKIQASATSASNVGDRYRIILSDGVHYAQAMLASQKRSMVESGELEKHCLVRITQFASNSVQNRRILILLDLDVVHKPTADRLGNPTNVDEAVKTEGGVKQEGG 257
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A1A6A3J9_9TREE (Replication protein A subunit n=2 Tax=Kwoniella TaxID=490731 RepID=A0A1A6A3J9_9TREE)

HSP 1 Score: 93.2 bits (230), Expect = 8.490e-18
Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = 1 
Query:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGT---DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSEDSSAGV------------KQELGG 384
            MA+ ++ G    +   A    G  P +QV+S+KK+   G    DR+RL+LSDG+HF Q+M+ATQ N ++ S +L +  +I L+ Y+ N VQ ++L+I+L L++      KIG+P N  +  +AG             KQE+GG
Sbjct:    1 MASPLTAGFCELVFNSADAPEGVTPILQVLSVKKINAPGATGQDRYRLILSDGKHFIQAMIATQLNNLVDSKELDKNVVIKLTGYVTNAVQGRKLVIILNLEIVPWNGEKIGNPTNLEQQQNAGAGASTSAPAQAVPKQEVGG 143
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BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A0D1CUI6_USTMA (Replication protein A subunit n=10 Tax=Ustilaginaceae TaxID=5268 RepID=A0A0D1CUI6_USTMA)

HSP 1 Score: 92.4 bits (228), Expect = 1.580e-17
Identity = 56/136 (41.18%), Postives = 89/136 (65.44%), Query Frame = 1 
Query:    7 NLISRGAINQIMGGATGAAG--YNPTVQVVSLKKMTNAGT------DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTP-KIGDPINFSEDSSA--GVKQELG 381
            N +S+GAI Q++  +  A+    NP  Q++S+KK+  + T      DR+R++LSDG ++AQ+MLA+Q+  M+ SG+L++ C++ ++ +  N VQN+R++ILL LDV   PT  ++G P N  E   A  GVKQE G
Sbjct:    4 NDLSQGAIAQMIQTSDPASSSVQNPVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQAMLASQKRSMVESGELEKNCLVRVTQFASNSVQNRRILILLDLDVVHKPTEDRLGHPTNVEEAVKAEGGVKQEGG 139
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Match: A0A7S2JN56_9EUKA (Replication protein A subunit n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JN56_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 1.630e-17
Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 1 
Query:   55 GAAGYNPTVQVVSLKKMTNAGT---DRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPTPKIGDPINFSED--SSAGVKQELGGGGNNNTGHY 411
            G A   P +QV+ +K++ N G    DR+RL LSDG  F QSMLATQ N+++++G+L++ C++ L+++I NVVQN+++II L + V SGP P IG+P        +S GV       G NN G Y
Sbjct:   20 GHAEKQPLLQVLDVKRIGNPGAPQGDRYRLQLSDGVFFTQSMLATQLNDLVANGELQQHCVVQLTEHICNVVQNRKIIIALGMIVKSGPVPVIGNPRQLESPPITSDGVT------GGNNPGQY 137
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10153.181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK0_9PHAE1.410e-8791.57Replication protein A subunit n=1 Tax=Ectocarpus s... [more]
D7FUU2_ECTSI2.140e-7595.83Rep-A_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3XQ94_HETAK6.720e-2853.91Replication protein A subunit n=1 Tax=Heterosigma ... [more]
I2FRR5_USTH45.850e-2143.54Replication protein A subunit n=1 Tax=Ustilago hor... [more]
A0A317XXN4_9BASI1.460e-2044.12Replication protein A subunit n=1 Tax=Testicularia... [more]
A0A835Z8X4_9STRA2.020e-2048.21Replication protein A subunit n=1 Tax=Tribonema mi... [more]
R9P362_PSEHS6.200e-1941.18Replication protein A subunit n=1 Tax=Pseudozyma h... [more]
A0A1A6A3J9_9TREE8.490e-1836.36Replication protein A subunit n=2 Tax=Kwoniella Ta... [more]
A0A0D1CUI6_USTMA1.580e-1741.18Replication protein A subunit n=10 Tax=Ustilaginac... [more]
A0A7S2JN56_9EUKA1.630e-1743.55Replication protein A subunit n=1 Tax=Cyanoptyche ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10153contigEcto-sp13_S_contig10153:3..5227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score238.8
Seed ortholog evalue2.3e-60
Seed eggNOG ortholog2880.D7FUU2
Preferred nameRFA1
Model size808
KEGG koko:K07466
KEGG Pathwayko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00288
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000280,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005662,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006268,GO:0006278,GO:0006279,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007059,GO:0007063,GO:0007088,GO:0007127,GO:0007129,GO:0007131,GO:0007140,GO:0007141,GO:0007275,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009555,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010638,GO:0010639,GO:0010833,GO:0010948,GO:0016043,GO:0016567,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030491,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032392,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0035861,GO:0036211,GO:0042162,GO:0042592,GO:0043047,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0043601,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0045132,GO:0045143,GO:0045184,GO:0045786,GO:0045839,GO:0045875,GO:0045930,GO:0045935,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051026,GO:0051052,GO:0051054,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060249,GO:0060255,GO:0060341,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070192,GO:0070647,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0071922,GO:0071923,GO:0080090,GO:0090304,GO:0090734,GO:0097159,GO:0098687,GO:0098813,GO:0098847,GO:0106111,GO:0106112,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902969,GO:1903046,GO:1903047,GO:1903827,GO:1903828,GO:1904356,GO:1904358,GO:1905405,GO:1905412,GO:1905634,GO:2000112,GO:2000278,GO:2000573,GO:2001251,GO:2001252
Exons6
EggNOG free text desc.DNA recombination
EggNOG OGsCOG1599@1,KOG0851@2759
Cds size636
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10153.181.1prot_Ecto-sp13_S_contig10153.181.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10153 984..5227 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462511.23715-UTR-Ecto-sp13_S_contig10153:2..661681462511.23715-UTR-Ecto-sp13_S_contig10153:2..66Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10153 3..66 -
1681462511.2647054-UTR-Ecto-sp13_S_contig10153:875..9831681462511.2647054-UTR-Ecto-sp13_S_contig10153:875..983Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10153 876..983 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462511.2755694-CDS-Ecto-sp13_S_contig10153:983..10931681462511.2755694-CDS-Ecto-sp13_S_contig10153:983..1093Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10153 984..1093 -
1681462511.285921-CDS-Ecto-sp13_S_contig10153:1469..16321681462511.285921-CDS-Ecto-sp13_S_contig10153:1469..1632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10153 1470..1632 -
1681462511.2976148-CDS-Ecto-sp13_S_contig10153:2010..21011681462511.2976148-CDS-Ecto-sp13_S_contig10153:2010..2101Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10153 2011..2101 -
1681462511.31011-CDS-Ecto-sp13_S_contig10153:2578..27661681462511.31011-CDS-Ecto-sp13_S_contig10153:2578..2766Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10153 2579..2766 -
1681462511.322416-CDS-Ecto-sp13_S_contig10153:5143..52271681462511.322416-CDS-Ecto-sp13_S_contig10153:5143..5227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10153 5144..5227 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10153.181.1

>prot_Ecto-sp13_S_contig10153.181.1 ID=prot_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDG
QHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDV
TSGPTPKIGDPINFSEDSSAGVKQELGGGGNNNTGHYGGGSKPNTGGYGA
GRDVKPKVANNPYGSSNKQANNPYAGGGNNNNYGGGGGNYGGGGGGGGGG
GPGRRSQQPLR*
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mRNA from alignment at Ecto-sp13_S_contig10153:3..5227-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10153.181.1 ID=mRNA_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10153:3..5227- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTAACTTAATCAGCCGCGGTGCGATCAATCAGATCATGGGCGGGGC
CACCGGCGCGGCGGGCTACAACCCGACTGTTCAGGTATGGGTGCCCATTA
CACAGACACCTTTTTGAACGACAGCCTCCCTCTTTTTTTATGATGGGTGT
GCGGAGCCACAGGGACGGTTAGGTTTGCCAACGCTCCAACGCCTCTGTCC
CCTCGTTGACCGACTGTGTTTTCATCGGGTGTGCCATGCGTGGTTGTAAG
AGGGTTGTCGCCTCGGTTGAAACTGCGTGGTAGGTGTGTTGGTCAGGTAA
AGCAATCGCGGGAAAGCGGGACGAATTTGAAAATTGTCCTTGGCGGGGAT
GCCCCTTTCCTACACACGGTCATCCGGTCACGAAGGAGCCTTGCGTCAAC
ACCCCGTGTGGTTACTCGTTCTTTTGGCGTATCCATGCTCGATGACTTTG
TTGCCCCGGGGATCGAAGCCGTAAACATCACGTCCAGCACCATGAAAAGT
TGTGTTGTTTTTGCGAAGGAGAGTTCGTTTCAACACTCACAAACTTCAGT
TCTTGGACGTAGTTTTGATGTTCGCCAGCCGTTCGGTGAAAGGGGTGCAT
CGTGCATCGGATAACCGACTCTGTACTTAGTGATACGTTTGTACGACGCT
TCGTCTAGCGGGGGCTAATGCACCCGTCGTTCGCTTCATTTTCAAAGCAT
GCACTGCTGTACTGCTGTAGCACAAAAAGCTCTGTCAACAACAGAGTGCT
GATTGTAAATACAGAAGTTTTGAAATGAAAGAATTTTCGAAATTTGAATT
TAAGAAGAATGGAGGTCGCAGTCTCCGGACAAAAGCGTAGGTACTACTTG
TGTAATAATCTTTTAGGCAGAGCACCCAAACGTAGGGCAATATTTCTGTT
GGACCAACACAACACAAAAAATTCATCGAAGTTTTAAAGGGGTGGAGCCG
GATAGATGCCGTTCTCCCACCAATCACATGTCGCTGATTGAGCGATGGGC
ACGACGCTCGCGGGAGAATCCCCGAAATTCTCTGGCACAGCAGCACCACA
CACACCACGCAGAGAACATACGAGACAACCAGCACAGCAGCATACGGACT
GCTGTTGGCCAACGGCAGCCAAAGGCACACATCATGGAAGGCGTTGGGTG
TGACTCTTGCAACCCGTTGCCTGCTGTCGGCAGCACAAGCGAGTGACGAC
GCAAGTCAATCTGCGGTCCGTCTGCATCACCTCAATCAACCTACCGATCT
TTGGAGCTTCCCACACAGACGCATCCCCACACAACAGAGACAACGAGACG
TCCACACTGCTGCACTAAGGCCGGCCGAATGCACACGTCATGGCTGGCGT
CGGAAGCTATTTTTAGACCCCGAGACCTGCTGCTAGCAGCGCAAGCGAGG
GAACCTGCGCGTGCACACAAGTCAAATATGTCTGCGGTCTGTTCGTCTGC
AGGCCGCGATCTTTACTTCCATCACAGAAGCCCCCCCGACACAGAGACAA
TTAGATGTACACAATGCTGTAGGTCGAGGGTGACCAAATGTACACATCGT
AGAGGCATCGGGGGCGGTTTTTAGAGCCCGTTGCCCGCTGCGAGCAGCGA
ATCTAAGAAAGTAAGTGCACAACACCCACATCCTGCACGGCGGCAGCAGC
CACAGCAGCAACAAGCAGAAGCAGCAGCTGCTGCTGCTCTAGCAGCAGCT
ACATGTAGCTGATGATTATGAGAGCTAAATAGCGCTCTCAGTCATCCTCT
GACTAGCTCGTGGTATCGGGTGAGGTTTGAGCGTGTGCACTGGTGACCTC
AGGTGGTGGCGTAGGCTCCACCCATATCTGTCACGGCTTGATTTGATGTC
TCTCTCCGCCCCTTCTTTTCGCGCTTAGACCCCTATGTATGGGAGTGGAG
CCATCTTTTCACGCTCGAAATTTGACCATTTTGAGAGCTGAGGGGCAGTC
TTCTCCCCCCAGTCTGCCGCGTCCTCTTCGCAAGAAGGTGCAGTGACCCG
TGTTGGTGTCGAGACGAAGGCGCTTGTTGCATAAAAGAAAATCATCGAGC
ACGATGAGGAATGAAGTGCGCGCAACCTTCGGACCCCCTAACAAGACCGC
CGTTTCAAGGCCCGCAGGCTCTCCTTAGGTCATCCTTTCTCACGCTGTAG
GCATCGCCGAGGCTCTTGCCACGCGCGCACATGAGATGGGCACAAGTAGC
TGGTCCGTTATTCGCGGCACTCACCAACCAGCTCATGAAACAACACAAAA
TCTACCACAAAACAAGCGTCGGTGGGCGTCAGCCTCTACTCTGTGCGTTT
CGTCACACTTGAACCGAAAAAGAAAGCAGCAGCCGGTTTCTTCTCAACCA
CTAGAAAGACACATACCCTTAGACTGCTGTGGATTTTCTCGGACGGACGG
TAGTCTTTGATTGGATGCATGTTTTTAAAGCAAATATACACATGCATGCA
AACGACATCAGGTGGTGAGCCTGAAGAAGATGACCAACGCGGGCACCGAC
CGATGGCGGCTGGTGCTGTCCGACGGGCAGCACTTCGCGCAGTCCATGCT
GGCCACTCAGCAGAACGAGATGATCTCCAGCGGTGATCTGAAAGAGCTGT
GCATCATCACCCTCAGCGACTACATCGTCAATGTCGTACAGAACAAGAGG
TGGGGGGGAGTGTGCATATGCCTGAACGTGGATGTACAAGACTTCCTTTT
GTATCATTGCCGAGTTTTATTTTTCAAGCCTGGTCTCGAAACATGGAGAC
AAGCGCACTACGTGTGTACATGTATTGCCGCATAATCTGTTGCCTCTGAG
CTGTCCAAACACAGCACCGGTGCGACGAGCCGGTTCATTGAGGAAAGTTG
GAAGATCGGCTCCCAGGATTGATTCAATTTTAATGTCGCTTCGTGTTCCG
GCTACACGCTATGCAACCAGCCATCGAAAGGTCCGATTTCCTGTAGGTGT
TCCTACGTATCCCCAGCAAAGCTTCCTGCTGTCCTTGCACAGCAGAACTG
TACCACCTATCACATTACCTAAATATGCCGTTCAATTTCAAACTGTTCAC
CATGCTATATCAGTACTGCATGCAGATATCATCACCCAATGACACCCATC
CCGTGCCTTTTTCGGAACACGCACAGGCTTATCATCTTGTTGAAGCTCGA
CGTCACCTCTGGTCCTACGCCCAAGATTGGCGACCCCATCAATTTCTCGG
AGGATTCTTCGGCGGGGGTGAGAGAAACATGCAGGCGTACACAACAGAGT
CGGCCGTACAAATGAGAGATATGCCCTGGGAGAGAGTGAGTGAAAGAGAG
ACAAAGAGGAACTGAGAGAGACATGGACTGAGAGAGAGGAAGAGAGAGAG
AGAGAGACGGGCTGAGAGAGAGAGGAAGAGATAGGGAGAGAGAGACAGCT
GAGAGAGAGAGACAGATAGACAGACAGACAGAGACAGAGACAGAGACGGA
CAGGCAGACAGACAGAGGCACGCCGAGAGGGGAAAGAGCCGCAGGCCAAA
GCGAACTCTTTCTTTTCATCACGGGCCAATTAATTGCCTGTTGGGGCTCA
ACCTTCCCCGCCACAACTTTCCATGCCATGCCTACGCGAAACCAGGTGAA
GCAAGAGCTGGGAGGCGGCGGCAACAACAACACCGGCCATTACGGTGGGG
GGTCGAAGCCCAACACCGGAGGATACGGAGCAGGACGGGACGTCAAGCCG
AAGGTGGCAAACAACCCCTACGGCTCCTCCAACAAACAGGCGAACAACCC
TTACGCAGGTGCGGTTGGTTGATCTTGGGGTGCTTTCGTTGTGGTTGATC
TTGCGGTGCTGTCGTAATTGTTGATCTTGCGGTGCTATCGTTATGGTTGA
TCTTGCGGTGCTGTCGTTATGGTTGATCTTGCTGCTGCTGCTGTGGCATT
AACCAGTCTATGCTGGTGTTGGTCGTTGATAGTGCAGTGGCGAACTTCCA
TTGAAAGAAGACGAAAAAGAGGGTCGAGCCGGCGTTGTGACCCCCAACCA
CCCCGAAAGTGGTGTATAACCCGGACAGAAATCAGAAAGCGATTGAACGC
GAGACAAGACAAGGATGTGATCCACCACATCGCTCCTCACCGTCTAAAAA
TGCTTGTGTACGCACATACATTTGGGGGCGTCAGGCGGCGGTAACAACAA
CAACTACGGCGGGGGAGGGGGAAACTACGGCGGCGGGGGCGGGGGCGGGG
GCGGGGGGGGCCCGGGGCGGCGCAGCCAACAACCCTTACGCTAACCGCGG
AAGCTCGAACAGCGGGCCGGTGCAGAGGCAGAGCCAGGACAGCGCGTACA
TGCCCATATCGGCGATCAACCCCTACCAGAACCGCTGGACGATCAAGGCC
AGGTGAGAAGAGAAGGGGAGGATATCGAGAAGGGGGGGAACAAGGGATTG
GAAAGGGAGAAAGCGAAGGGGCGAGAGACGGGGGAAACGAGACAATTTAC
ATGGGAAGGGGAGGGAAGAGGTGGAGAGTTTTTTTAGAGCAAAGCACAAC
AGGGTGCATGAAGCGATCGATAGAAGGAATGCTATCAAGAGGTAGGTTCT
GTTTTGGTACATGGACGGCTTTTTTTATGTCTGGCTGAGAAGCACTTTGT
TCGTGAGCAGGTCAACGGCATCCACGTCAATACTCAGTGCCGAAGTTTTG
GCGTTTGCCCACTAGAGGTCGCTGTAGAGGCGAAGGGATGATGTTTGTGT
GGTTGTCTCCTCACCGAAGGTGCTACTGCTACTGTACCTCGATATGGTAT
ACCTTTGTTACACACTGGAGGTGTTTATTTTCTCCCTCGGCTTCTCCTCC
CTGGAGATGAACCATGTAGTCCCACTTTCAGCAGCGTCGTGCTCGTCGTT
TCTCTAGAGAATTTCTGCTTGCAATTACGTTCGTAAACGGTTTTGTATTT
TTTCCGTCCTCGACTTTGTCGGTGTTGGTTTGCTTCGTTTTGGTCATAAC
GAAGAGCTATTGGACATGCGCGTGCTGCCGTATACTCTCATGGGGACTCT
CACAAGGAGGTACGTGTGACTTGTCATGAGACAACCGCAGCACAAGCAGT
GTGTTGGATTGTGTCGGTACCGGCGTTGCCGGGTTGCGTTGCGATCTCAT
GAGACGACCACAGTGTGGCTAATTCTGGCGGCGCTGTCATTGGCCTGGGT
TGCGACGACAGGATCACCAAGAAGGGAGACATGCGTCAGTGGAACAACGC
CCGGGGTTCGGGGACCCTTTTCTCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10153:3..5227-

>mRNA_Ecto-sp13_S_contig10153.181.1 ID=mRNA_Ecto-sp13_S_contig10153.181.1|Name=mRNA_Ecto-sp13_S_contig10153.181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10153:3..5227- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTAACTTAATCAGCCGCGGTGCGATCAATCAGATCATGGGCGGGGC
CACCGGCGCGGCGGGCTACAACCCGACTGTTCAGGTGGTGAGCCTGAAGA
AGATGACCAACGCGGGCACCGACCGATGGCGGCTGGTGCTGTCCGACGGG
CAGCACTTCGCGCAGTCCATGCTGGCCACTCAGCAGAACGAGATGATCTC
CAGCGGTGATCTGAAAGAGCTGTGCATCATCACCCTCAGCGACTACATCG
TCAATGTCGTACAGAACAAGAGGCTTATCATCTTGTTGAAGCTCGACGTC
ACCTCTGGTCCTACGCCCAAGATTGGCGACCCCATCAATTTCTCGGAGGA
TTCTTCGGCGGGGGTGAAGCAAGAGCTGGGAGGCGGCGGCAACAACAACA
CCGGCCATTACGGTGGGGGGTCGAAGCCCAACACCGGAGGATACGGAGCA
GGACGGGACGTCAAGCCGAAGGTGGCAAACAACCCCTACGGCTCCTCCAA
CAAACAGGCGAACAACCCTTACGCAGGCGGCGGTAACAACAACAACTACG
GCGGGGGAGGGGGAAACTACGGCGGCGGGGGCGGGGGCGGGGGCGGGGGG
GGCCCGGGGCGGCGCAGCCAACAACCCTTACGCTAA
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